Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M06
(730 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1; B... 352 4e-96
UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like prot... 157 3e-37
UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1; B... 148 2e-34
UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1, mi... 109 7e-23
UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase, chl... 107 3e-22
UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM065... 106 5e-22
UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza sat... 103 4e-21
UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16; Ne... 103 4e-21
UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 100 3e-20
UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 97 4e-19
UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 97 4e-19
UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips ... 92 1e-17
UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6; Magnolio... 90 4e-17
UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 88 2e-16
UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3; Dic... 86 7e-16
UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;... 84 3e-15
UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome sh... 82 2e-14
UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5; Dik... 82 2e-14
UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma j... 77 3e-13
UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putati... 77 4e-13
UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putati... 76 8e-13
UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl p... 71 2e-11
UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n... 70 7e-11
UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl p... 62 2e-08
UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2; Tox... 62 2e-08
UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;... 62 2e-08
UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl p... 59 1e-07
UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase, puta... 58 2e-07
UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2; ... 57 5e-07
UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3; C... 56 9e-07
UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase , put... 56 9e-07
UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n... 53 6e-06
UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;... 50 6e-05
UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lambl... 48 2e-04
UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate syn... 44 0.003
UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_030012... 44 0.005
UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;... 42 0.020
UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate s... 42 0.020
UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase; ... 41 0.036
UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Re... 40 0.062
UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4; S... 40 0.062
UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3; Methanomicr... 39 0.11
UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase; ... 39 0.14
UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep: M... 38 0.19
UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=... 38 0.25
UniRef50_A6C8V0 Cluster: Polyprenyl synthetase; n=1; Planctomyce... 38 0.33
UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase; ... 38 0.33
UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Re... 38 0.33
UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3; B... 37 0.44
UniRef50_A3HX57 Cluster: Putative isoprenoid biosynthesis relate... 37 0.44
UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3; T... 37 0.44
UniRef50_Q8UBX7 Cluster: Geranyltranstransferase; n=4; Rhizobium... 37 0.58
UniRef50_Q4AET3 Cluster: Farnesyltranstransferase; n=1; Chlorobi... 37 0.58
UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl diph... 37 0.58
UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.77
UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase / dimethyl... 36 0.77
UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus ... 36 0.77
UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanocull... 36 0.77
UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020; ... 36 1.0
UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2; Actinomycet... 36 1.0
UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase; ... 36 1.3
UniRef50_Q6AE53 Cluster: Geranylgeranyl pyrophosphate synthase; ... 36 1.3
UniRef50_Q9ZCE0 Cluster: Tyrosine recombinase xerC; n=10; Ricket... 36 1.3
UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome sh... 35 1.8
UniRef50_Q2I775 Cluster: PlaT4; n=1; Streptomyces sp. Tu6071|Rep... 35 1.8
UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17; Actinomyce... 35 1.8
UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioide... 35 1.8
UniRef50_Q5E0Z2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus la... 35 2.3
UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain i... 35 2.3
UniRef50_Q3ACT5 Cluster: Heptaprenyl diphosphate synthase compon... 34 3.1
UniRef50_O05708 Cluster: Octaprenyl-diphosphate synthase; n=1; T... 34 3.1
UniRef50_Q26HU1 Cluster: Polyprenyl synthetase; n=14; Bacteroide... 34 3.1
UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho... 34 3.1
UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n... 34 3.1
UniRef50_Q64BF4 Cluster: Bifunctional short chain isoprenyl diph... 34 3.1
UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_0028... 34 4.1
UniRef50_Q82P04 Cluster: Putative polyprenyl diphosphate synthas... 34 4.1
UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia farc... 34 4.1
UniRef50_Q2JD77 Cluster: Polyprenyl synthetase; n=2; Frankia|Rep... 34 4.1
UniRef50_Q4W8B2 Cluster: GGPP synthase; n=2; Brevundimonas|Rep: ... 34 4.1
UniRef50_A7HJU8 Cluster: Polyprenyl synthetase; n=1; Fervidobact... 34 4.1
UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, wh... 34 4.1
UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii SB... 34 4.1
UniRef50_A5P6P0 Cluster: Polyprenyl synthetase; n=1; Erythrobact... 33 5.4
UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidat... 33 5.4
UniRef50_O14207 Cluster: Uncharacterized protein C6B12.02c; n=1;... 33 5.4
UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=... 33 7.2
UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain isopr... 33 7.2
UniRef50_Q11XW6 Cluster: Geranyltranstransferase; n=3; Sphingoba... 33 7.2
UniRef50_Q0GQQ6 Cluster: Cys-loop ligand-gated ion channel subun... 33 7.2
UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1; Staphylothe... 33 7.2
UniRef50_A1RWE7 Cluster: Polyprenyl synthetase; n=1; Thermofilum... 33 7.2
UniRef50_Q31Q84 Cluster: Phage late control gene D protein GPD; ... 33 9.5
UniRef50_Q2RM43 Cluster: Polyprenyl synthetase; n=1; Moorella th... 33 9.5
UniRef50_Q9S5E9 Cluster: SelF-HepPS; n=1; Synechococcus elongatu... 33 9.5
UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase; ... 33 9.5
UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4; Alphaproteo... 33 9.5
UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1; Ar... 33 9.5
UniRef50_Q9HQI3 Cluster: Geranylgeranyl diphosphate synthase; n=... 33 9.5
UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6; Thermoprote... 33 9.5
>UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 2 -
Bombyx mori (Silk moth)
Length = 382
Score = 352 bits (866), Expect = 4e-96
Identities = 162/166 (97%), Positives = 162/166 (97%)
Frame = +3
Query: 231 MSVFNFLKITRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 410
MSVFN LK TRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN
Sbjct: 1 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 60
Query: 411 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 590
KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC
Sbjct: 61 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 120
Query: 591 VEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLIH 728
VEMF AYCIVLDDIMDGSSVRRGMPCWYRRPEVGITC FNDSLLIH
Sbjct: 121 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIH 166
>UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like
protein; n=2; Choristoneura fumiferana|Rep: Farnesyl
diphosphate synthase-like protein - Choristoneura
fumiferana (Spruce budworm)
Length = 397
Score = 157 bits (380), Expect = 3e-37
Identities = 62/122 (50%), Positives = 93/122 (76%)
Frame = +3
Query: 357 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 536
+K+ F+D+LP ++ T+ S+L+EVP++ +WLKK+L YNL GGK RG+TT+ +Y+ +EK
Sbjct: 58 KKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLEK 117
Query: 537 PEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDS 716
PE +TE T+ +A LGWCVE+ + ++LDDIMDGS+ RRG+PCWY+ PEVG+ + S
Sbjct: 118 PENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVNDSS 177
Query: 717 LL 722
L+
Sbjct: 178 LM 179
>UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 3 -
Bombyx mori (Silk moth)
Length = 385
Score = 148 bits (358), Expect = 2e-34
Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +3
Query: 246 FLKITRKVTYKYWPQLIRYKNNSANMTTA--SKNLEIINEKKMFDDLLPEVIMTLQNKSK 419
FL++ + Y I +++ ++A + +I E++ F D +I L K
Sbjct: 7 FLRLINRTRQIYPINSISFQSAGCRCSSAYAASVPQIAKERETFQDAWKGIIDNLTTNKK 66
Query: 420 LSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEM 599
+++P++G W+KK+L YN+ GGK RGITTV++Y+ EKPE VTE +++A GWC EM
Sbjct: 67 FTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEM 126
Query: 600 FXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLIH 728
AY I+ DDIMDGSS RRG+PCWYR P+VG+ ND++L++
Sbjct: 127 LQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLG-AINDAILVY 168
>UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=61;
Spermatophyta|Rep: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 109 bits (262), Expect = 7e-23
Identities = 56/145 (38%), Positives = 85/145 (58%)
Frame = +3
Query: 291 LIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHY 470
L R + S++M T K+ + + DLL + N+S+L W+ +ML Y
Sbjct: 32 LYRRRIQSSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRL--------WVDRMLDY 83
Query: 471 NLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSV 650
N+ GGK RG++ V S+K +++ +TE + ++C LGWC+E AY +VLDDIMD S
Sbjct: 84 NVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVT 143
Query: 651 RRGMPCWYRRPEVGITCXFNDSLLI 725
RRG PCW+R P+VG+ ND +L+
Sbjct: 144 RRGQPCWFRVPQVGMV-AINDGILL 167
>UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase,
chloroplast precursor; n=2; Anthemideae|Rep:
Chrysanthemyl diphosphate synthase, chloroplast
precursor - Tanacetum cinerariifolium (Dalmatian daisy)
(Chrysanthemumcinerariifolium)
Length = 395
Score = 107 bits (257), Expect = 3e-22
Identities = 47/93 (50%), Positives = 64/93 (68%)
Frame = +3
Query: 447 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLD 626
W+++M+ YN+ GGK RG + V SY+ + K E++TE +AC LGWC E A+ +VLD
Sbjct: 88 WVERMIDYNVPGGKMVRGYSVVDSYQLL-KGEELTEDEAFLACALGWCTEWLQAFILVLD 146
Query: 627 DIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
DIMDGS RRG PCW+R PEVG+ ND +L+
Sbjct: 147 DIMDGSHTRRGQPCWFRLPEVGVV-AINDGVLL 178
>UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM06581p
- Drosophila melanogaster (Fruit fly)
Length = 419
Score = 106 bits (255), Expect = 5e-22
Identities = 46/124 (37%), Positives = 74/124 (59%)
Frame = +3
Query: 354 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 533
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 534 KPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 713
+ +T +K+A LGWCVEM ++ I+ DD+MD S+ RRG PCW++ VG+T ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 714 SLLI 725
+L+I
Sbjct: 201 ALMI 204
>UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza
sativa|Rep: OSIGBa0158D24.4 protein - Oryza sativa
(Rice)
Length = 392
Score = 103 bits (247), Expect = 4e-21
Identities = 45/93 (48%), Positives = 62/93 (66%)
Frame = +3
Query: 447 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLD 626
WL +M+ YN+ GGK RG++ + SY +++ +VTE +AC LGWCVE F A ++LD
Sbjct: 84 WLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLD 143
Query: 627 DIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
DIMD S RR CWYRRPEVG+ ND +++
Sbjct: 144 DIMDDSHTRRDQICWYRRPEVGLR-GINDGIIL 175
>UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16;
Neoptera|Rep: Farnesyl diphosphate synthase - Anthonomus
grandis (Boll weevil)
Length = 438
Score = 103 bits (247), Expect = 4e-21
Identities = 47/131 (35%), Positives = 76/131 (58%)
Frame = +3
Query: 333 SKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTV 512
S L + + F L P+++ L + E+P + + ++L YN+ GK RG+ +
Sbjct: 90 SSTLVSKEQSRDFMALFPDLVRELTELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILI 149
Query: 513 ISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVG 692
+YK +E P+ +T +K+A LGWC+EM + +VLDDIMD S RRG CWYR+ +G
Sbjct: 150 SAYKMLEDPKNLTPENIKLASVLGWCLEMIHSCFLVLDDIMDNSETRRGSLCWYRQNGIG 209
Query: 693 ITCXFNDSLLI 725
++ ND L++
Sbjct: 210 LS-AINDGLIL 219
>UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=44;
Eukaryota|Rep: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Homo sapiens
(Human)
Length = 353
Score = 100 bits (240), Expect = 3e-20
Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Frame = +3
Query: 432 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 602
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 603 XAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
A+ +V DDIMD S RRG CWY++P VG+ ND+ L+
Sbjct: 96 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLL 135
>UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 348
Score = 97.1 bits (231), Expect = 4e-19
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = +3
Query: 444 DWLKKMLHYNLVGGKHTRGITTVISYKTIE--KPEKVTEHTLKMACKLGWCVEMFXAYCI 617
+W+K+M+ YN+ GK RG+ V + ++ K E V E LK A +GWC+E AY +
Sbjct: 37 EWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVVGWCIEFLQAYFL 96
Query: 618 VLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
V DDIMD S RRG PCWYR+P+V +T ND +L+
Sbjct: 97 VADDIMDESVTRRGQPCWYRQPDVKMT-AINDGILL 131
>UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=16;
Fungi/Metazoa group|Rep: Farnesyl pyrophosphate
synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate
synthetase) [Includes: Dimethylallyltranstransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] -
Gallus gallus (Chicken)
Length = 367
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +3
Query: 357 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---LKKMLHYNLVGGKHTRGITTVISYKT 527
E++ F P+++ L + + P++GD LK++L YN GGK RG+T V +Y+
Sbjct: 27 EREEFVGFFPQIVRDL-TEDGIGH-PEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRE 84
Query: 528 IEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXF 707
+ P + +L+ A +GWC+E+F A+ +V DDIMD S RRG CWY++ VG+
Sbjct: 85 LSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLD-AI 143
Query: 708 NDSLLI 725
NDS L+
Sbjct: 144 NDSFLL 149
>UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips
pini|Rep: Geranyl diphosphate synthase - Ips pini (Pine
engraver beetle)
Length = 416
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Frame = +3
Query: 294 IRYKNNSANMTTA-SKNLEIINEK-----KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLK 455
IR+K+ S+ + ++ SK++ NE+ K D++ PEV+ ++ + E+ I L+
Sbjct: 41 IRHKSRSSAVPSSLSKSMYDHNEEMKAAMKYMDEIYPEVMGQIEKVPQYEEIKPILVRLR 100
Query: 456 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIM 635
+ + Y + GK +G+ V +K + P+ +T +K++ LGWC E+ AY +LDDIM
Sbjct: 101 EAIDYTVPYGKRFKGVHIVSHFKLLADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDIM 160
Query: 636 DGSSVRRGMPCWYRRPEVGI 695
D S RRG P WY+ P +G+
Sbjct: 161 DDSDTRRGKPTWYKLPGIGL 180
>UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6;
Magnoliophyta|Rep: OSJNBa0071I13.18 protein - Oryza
sativa subsp. japonica (Rice)
Length = 407
Score = 90.2 bits (214), Expect = 4e-17
Identities = 40/93 (43%), Positives = 57/93 (61%)
Frame = +3
Query: 447 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLD 626
W+ KM+ YN+ GGK RG++ V SY + + +V + +AC LGWCVE A +VLD
Sbjct: 99 WVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLD 158
Query: 627 DIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
DI D + RR CWY+ P VG++ ND +L+
Sbjct: 159 DITDNAYTRRDNLCWYKLPTVGMS-AINDGVLL 190
>UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=32; Fungi|Rep:
Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Saccharomyces
cerevisiae (Baker's yeast)
Length = 352
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = +3
Query: 360 KKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEK 536
++ F ++ P+++ L +P+ DW L+YN GGK RG++ V +Y +
Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSN 68
Query: 537 P--EKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 710
E++ + + LGWC+E+ AY +V DD+MD S RRG PCWY+ PEVG N
Sbjct: 69 KTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVG-EIAIN 127
Query: 711 DSLLI 725
D+ ++
Sbjct: 128 DAFML 132
>UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3;
Dictyostelium discoideum|Rep: Farnesyl diphosphate
synthase - Dictyostelium discoideum AX4
Length = 382
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/129 (34%), Positives = 73/129 (56%)
Frame = +3
Query: 294 IRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYN 473
+ SA + TA + E+ + ++F L E++ L + PQ W++KM++ N
Sbjct: 22 LNMNQTSAPIKTAKE--ELADFVEIFPILTNEILKELPG---MDMPPQTIAWVEKMINVN 76
Query: 474 LVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVR 653
+ GGK RG+T + S + + + +++ + +A LGWCVE A+ +V DDIMD S R
Sbjct: 77 VSGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITR 136
Query: 654 RGMPCWYRR 680
RG PCWYR+
Sbjct: 137 RGQPCWYRQ 145
>UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 388
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Frame = +3
Query: 417 KLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTE---HTLKMACKLG 584
KL +P+ W YN+ GGK RG++ V +Y I K +KV E LK LG
Sbjct: 65 KLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTY-AILKGKKVNELESDELKKVTILG 123
Query: 585 WCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
WCVEM A+ +V DDIMD + RRG PCWY++ VG+ NDS ++
Sbjct: 124 WCVEMLQAFFLVADDIMDKAEKRRGHPCWYKKDGVGL-IAINDSFVL 169
>UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;
Aspergillus niger|Rep: Contig An16c0060, complete genome
- Aspergillus niger
Length = 349
Score = 84.2 bits (199), Expect = 3e-15
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +3
Query: 357 EKKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 533
++ FD +L E++ + + PQ + ++++K + N GK RG++ + +I
Sbjct: 6 DRSKFDGVLAELVADVLEHFASNGAPQEVKNYVEKCFYENSTNGKMLRGLSVPQTGLSI- 64
Query: 534 KPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 713
VTE C LGW VE+ AY + DDIMD SS RRG PCWYR P VG+ +
Sbjct: 65 LGRPVTEQEYHDLCVLGWLVELLQAYLLTHDDIMDNSSTRRGKPCWYRLPSVGMKAVNDG 124
Query: 714 SLL 722
SLL
Sbjct: 125 SLL 127
>UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 402
Score = 81.8 bits (193), Expect = 2e-14
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +3
Query: 456 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIM 635
++L YN+ GGK RG++ + S + + P ++T+ ++ A +GWC+E+ A+ +V DDIM
Sbjct: 68 QVLMYNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIELLQAFFLVADDIM 127
Query: 636 DGSSVRRGMPCWYRR 680
D S RRG PCWY++
Sbjct: 128 DASVTRRGQPCWYKK 142
>UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5;
Dikarya|Rep: Farnesyl diphosphate synthase - Lactarius
chrysorrheus (Yellowdrop milkcap) (Agaricus theiogalus)
Length = 381
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +3
Query: 306 NNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVG 482
++SA + A+ + +K F+ + V L + +P+ ++ ++ + YN+ G
Sbjct: 10 SSSAPLPPAAAKDKKAAARKRFEGVYAVVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPG 69
Query: 483 GKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGM 662
GK RG++ V S I K ++TE A LGW VE AY +V DDIMD S RRG
Sbjct: 70 GKLNRGMSVVDSV-AILKGRELTESEYFQAAVLGWAVEWMQAYFLVSDDIMDASITRRGQ 128
Query: 663 PCWYRRPEVGITCXFNDSLLI 725
PCWYR VG ND+L++
Sbjct: 129 PCWYRTEGVGF-MAINDALIL 148
>UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02430 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +3
Query: 321 MTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRG 500
M TA +++ K++F+ + ++L ++ + + ++ YNL GK RG
Sbjct: 1 MPTADLHIKFREVKEIFESYF-DTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRG 59
Query: 501 ITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWY 674
+ V+SY + +L +GWCVE+ A +VLDDI+D S++RRG PCW+
Sbjct: 60 VLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWH 117
>UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putative;
n=11; Trypanosomatidae|Rep: Farnesyl pyrophosphate
synthase, putative - Leishmania major
Length = 362
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +3
Query: 447 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVT----EHTLKMACKLGWCVEMFXAYC 614
+LK M+ +GGK+ RG+ V + + K ++ E L AC GW +EM A+
Sbjct: 35 YLKSMMDTTCLGGKYNRGLCVVDVAEAMAKDTQMDAAAMERVLHDACVCGWMIEMLQAHF 94
Query: 615 IVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
+V DDIMD S RRG PCWY P V ND L++
Sbjct: 95 LVEDDIMDHSKTRRGKPCWYLHPGVTAQVAINDGLIL 131
>UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putative;
n=7; Plasmodium|Rep: Farnesyl pyrophosphate synthase,
putative - Plasmodium vivax
Length = 375
Score = 76.2 bits (179), Expect = 8e-13
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 360 KKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 536
+ M+D + L S E+ + I + K + YN +GGK+ RGI ++ Y+ ++
Sbjct: 17 RNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKN 76
Query: 537 PEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDS 716
+ + K AC L WC+E+ A +V DDIMD RR CWY +V ND
Sbjct: 77 RDINSSEWEKAAC-LAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDV 135
Query: 717 LLIH 728
LL++
Sbjct: 136 LLLY 139
>UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 342
Score = 71.7 bits (168), Expect = 2e-11
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 369 FDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTI-EKPE 542
F +L + +Q + P I D L++ L N GK RG+T V + T+ ++P
Sbjct: 7 FKSVLEVLANEIQEDLSERKAPSAIRDRLQQCLLANTKDGKLNRGLTVVDTGCTLLQRPP 66
Query: 543 KVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLL 722
E + LGW VEMF A +V DDIMD S RRG CWYRR EVG+T ND+
Sbjct: 67 TPAE--FQDLSILGWMVEMFQASYLVSDDIMDNSEYRRGKLCWYRRDEVGLT-AINDAAF 123
Query: 723 I 725
+
Sbjct: 124 L 124
>UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial; n=7; Apis
mellifera|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial - Apis
mellifera
Length = 545
Score = 71.3 bits (167), Expect = 2e-11
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Frame = +3
Query: 252 KITRKVTYKYWPQLIRY----KNNSANMTTASKNLEIIN-EKKMFDDLLPEVIMTLQNKS 416
+I K+ Y L+ Y NN + ++ N E+ + P ++ L K
Sbjct: 186 EIYDKIVNAYESALLYYLPFLSNNRLKSNKVRRLVDSFNDERNKLMTVWPNIVNEL-TKD 244
Query: 417 KLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE 596
E+ + W+ ++L YN+ G R ++ VI+ K + ++TE ++A L WC+E
Sbjct: 245 NNEELLDVNKWITEVLEYNVPKGGKRRSVSFVIACKLLTSQNQLTEENTRLAHILAWCIE 304
Query: 597 MFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
+ A + DDI+D +++RR P W+ ++G+ ND LLI
Sbjct: 305 IMQAVHTMADDILDHANMRRNQPAWH--VKIGL-FAVNDILLI 344
>UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n=2;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 334
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +3
Query: 444 DWLKK----MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAY 611
DW++K ML Y+ GGK RGI T Y + +E K+ LGW E+ A
Sbjct: 28 DWVQKHCIDMLEYSTKGGKMLRGIMTAAVYLELTGYSPDSEEA-KVGYYLGWVEEIIHAG 86
Query: 612 CIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
++ DD+MD S RRG CWY+R E+G ND L++
Sbjct: 87 YLIADDLMDQSETRRGQECWYKREEIG-DQAVNDGLIL 123
>UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 352
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/91 (28%), Positives = 51/91 (56%)
Frame = +3
Query: 453 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDI 632
+ + ++GGK++R V + + ++ + L+ C+ +E+ ++ ++ DDI
Sbjct: 42 RNLFDNTVIGGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI 101
Query: 633 MDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
MD S RRG PCW+RR VG++ ND+ ++
Sbjct: 102 MDNSETRRGKPCWFRREGVGMS-AINDAFIM 131
>UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=2; Eutheria|Rep:
PREDICTED: similar to Farnesyl pyrophosphate synthetase
(FPP synthetase) (FPS) (Farnesyl diphosphate synthetase)
- Canis familiaris
Length = 262
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/66 (39%), Positives = 43/66 (65%)
Frame = +3
Query: 528 IEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXF 707
I + ++V E+ A +GWC+E+ A+ +V DDIMD S ++G CWY++P +G+
Sbjct: 42 IAQLKEVLEYNAVGALTVGWCMELLQAFFLVSDDIMDSSLTQQGQICWYQKPGIGLD-AI 100
Query: 708 NDSLLI 725
ND+LL+
Sbjct: 101 NDALLL 106
>UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2;
Toxoplasma gondii|Rep: Farnesyl diphosphate synthase -
Toxoplasma gondii
Length = 646
Score = 61.7 bits (143), Expect = 2e-08
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 579 LGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
LGWCVE+ + +V+DD+MD S RRG CWYR +G++ NDSL++
Sbjct: 316 LGWCVELLQSCFLVMDDVMDHSLTRRGKQCWYRCDGIGVSNAVNDSLVL 364
>UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;
Schizosaccharomyces pombe|Rep: Farnesyl pyrophosphate
synthetase - Schizosaccharomyces pombe (Fission yeast)
Length = 351
Score = 61.7 bits (143), Expect = 2e-08
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +3
Query: 360 KKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 536
KK D P V+ ++ + P+ + L + N +GGK+ RG+ + S ++
Sbjct: 12 KKRLLDFFPVVLEGIREILESMQYFPEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLIN 71
Query: 537 PEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDS 716
E + E + A LGW +E+ ++ DDIMD S RRG+ CWY VG+ N+S
Sbjct: 72 RE-LEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYL--VVGVRRAINES 128
Query: 717 LLI 725
L+
Sbjct: 129 QLL 131
>UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) - Canis familiaris
Length = 259
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3
Query: 543 KVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLL 722
K +L+ A +GWCVE+ A+ +V DDIMD + R G CWY+ P +G+ ND+LL
Sbjct: 26 KAVGGSLRRALSVGWCVELLQAFFLVSDDIMDLTLTRWGQICWYQNPGIGLD-AINDALL 84
>UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase,
putative; n=2; Theileria|Rep: Farnesyl pyrophosphate
synthetase, putative - Theileria annulata
Length = 384
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Frame = +3
Query: 366 MFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRG---ITTVISYKTIE 533
+ D P+ + N+ K + Q + + + YNL GGK RG ++TV S
Sbjct: 18 LLKDFFPKFLELAINELKTYGLSQNVLLYYSYAVQYNLQGGKMLRGTMVLSTVKSLCGTN 77
Query: 534 KPEKVTEHTLKMACK---------LGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPE 686
PE + TL + + WCVE+ +V DDI+D S+ RR CWY P
Sbjct: 78 IPENLMTQTLIVGMYNSNHLKQFIVAWCVELLQTSFLVADDIIDKSTKRRSNTCWYLVPT 137
Query: 687 VGITCXFNDSLLIH 728
+G++ ND + ++
Sbjct: 138 IGVSNAINDVMFLY 151
>UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 306
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/89 (38%), Positives = 48/89 (53%)
Frame = +3
Query: 459 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMD 638
ML YN++GG+ ++ KP T + GW ++ AY +VLDDIMD
Sbjct: 52 MLDYNVLGGEKN-----MLFRNNATKPNNGT-------LRYGWQLQ---AYFLVLDDIMD 96
Query: 639 GSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
S RRG PCW+R P+VG+ ND L++
Sbjct: 97 NSQTRRGKPCWFRLPKVGL-IAINDGLVL 124
>UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3;
Cryptosporidium|Rep: Farnesyl pyrophosphate synthase -
Cryptosporidium hominis
Length = 353
Score = 56.0 bits (129), Expect = 9e-07
Identities = 34/110 (30%), Positives = 51/110 (46%)
Frame = +3
Query: 345 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYK 524
+ IN F ++ V+ L ++ + P I +L + YN+ GKH RG V+
Sbjct: 12 DFINYYDKFKVIIYNVLEKLPLNDEIRK-PVIEYYLN-CIDYNVKKGKHIRGKILVLISS 69
Query: 525 TIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWY 674
+ ++ + LGW VE A ++ DDIMD RRG PCWY
Sbjct: 70 LSSAYSNIKRDSIYL---LGWVVEAIQALILIADDIMDSGKFRRGAPCWY 116
>UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase ,
putative; n=1; Babesia bovis|Rep: Farnesyl pyrophosphate
synthetase , putative - Babesia bovis
Length = 336
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 462 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLG--WCVEMFXAYCIVLDDIM 635
+ YNL GGK RG V + + I + ++E+ K+A LG WCVE+ +V DDIM
Sbjct: 52 IQYNLQGGKLIRGTLVVATTRCI-LGDNISEYQWKLALILGMGWCVELLQTAFLVADDIM 110
Query: 636 DGSSVRRGMPCW 671
D S +RR CW
Sbjct: 111 DKSVMRRSNLCW 122
>UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n=1;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 338
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 459 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMD 638
++ Y + GGK RG+ +V + + ++ + A LGW E+ A +V DD+MD
Sbjct: 38 LVDYTIAGGKCLRGLLSVFGFLELTGYSPDSKEA-EAAYALGWVQEILQASFLVADDLMD 96
Query: 639 GSSVRRGMPCWY 674
S +RR PCWY
Sbjct: 97 KSPLRRDKPCWY 108
>UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 393
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Frame = +3
Query: 444 DWLKKMLHY-NLVGGKHTRGITTVISYKTI------------EKPEKVTEHTLKMACKLG 584
D++K++L+ + GGK RG+ + S T+ K +E + A +G
Sbjct: 42 DYIKELLNSPTITGGKMYRGLGFLYSLNTLLIAKNNFDNNNNNNNNKNSETSQHEARIIG 101
Query: 585 WCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRP 683
WC+E F ++ ++ DDIMD RRG CWYR P
Sbjct: 102 WCLE-FLSFFLITDDIMDNGLTRRGELCWYRHP 133
>UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;
Encephalitozoon cuniculi|Rep: FARNESYL PYROPHOSPHATE
SYNTHETASE - Encephalitozoon cuniculi
Length = 292
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +3
Query: 459 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMD 638
+L YNL GGK R V K + +V+ L M G+ VE+ A +++DDIMD
Sbjct: 25 LLDYNLGGGKELRYKAYVHVLKALNG--EVSMENLIM----GYSVELLQAVLLIVDDIMD 78
Query: 639 GSSVRRGMPCWY 674
S +RRG PC+Y
Sbjct: 79 NSKIRRGKPCYY 90
>UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_14387_13164 - Giardia lamblia
ATCC 50803
Length = 407
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Frame = +3
Query: 444 DWLKKMLHYNLVGGKHTRG-ITTVISYKTIE-------KPEKVTEHTLKMACKLGWCVEM 599
D + +++ YN+VGGK TRG + I +T+ + +E +A + E+
Sbjct: 52 DHIVEVIKYNVVGGKMTRGTLAADIFLQTVRFLFSGLLEDSNFSEELFNLAIDICLVQEI 111
Query: 600 FXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
+++DD++D S++RRG P W R VG ND L++
Sbjct: 112 LQGAFLMIDDVIDHSTIRRGKPSW--RAVVGDEQAVNDGLIL 151
>UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate
synthase; n=1; Streptomyces ambofaciens|Rep: Putative
geranylgeranyl diphosphate synthase - Streptomyces
ambofaciens
Length = 357
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +3
Query: 414 SKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCV 593
++ S P++ + L+ L GGK R + V+ + E L++A L
Sbjct: 36 ARRSHPPEVANTLRAFL---AAGGKRVRALLCVVGWHAAGGSEDRAA-VLRVAASL---- 87
Query: 594 EMFXAYCIVLDDIMDGSSVRRGMPCWYR 677
E+F A+ ++ DDIMD S+VRRG P +R
Sbjct: 88 ELFVAFALIHDDIMDDSAVRRGRPAVHR 115
>UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_03001280;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001280 - Ferroplasma acidarmanus fer1
Length = 352
Score = 43.6 bits (98), Expect = 0.005
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +3
Query: 354 NEKKMFDDLLPEVIMTLQN--KSKLSEVP--QIGDWLKKMLHYNLVGGKHTRGITTVISY 521
N KK D L ++ L+ KL+E +I D + K+ + L GGK R I ++ Y
Sbjct: 7 NYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPILMIMGY 66
Query: 522 KTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPE 686
+ E +K + +E+ ++ ++ DDIMD S +RRG P +++ E
Sbjct: 67 NMFSGQD---ERIIKASIS----IELAQSFLLIHDDIMDQSDMRRGKPSFHKAVE 114
>UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 423
Score = 41.5 bits (93), Expect = 0.020
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Frame = +3
Query: 219 DIVDMSVFNFLKITRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIM 398
+I++ SV + KV ++ ++ + A++ ++ + + + E K+ +++ I
Sbjct: 133 EIIEESVETLHETLIKVESPLGMKIKTFEFDDASILSSPEKTKQLEENKLLEEIPKATIS 192
Query: 399 TLQNKSKLSEVPQIGDWLKKMLHY-------NLVGGKHTRGITTVISYKTIEKPEKVTEH 557
+L+ K KLSE I KML N+ T I +I+ +TIEK +
Sbjct: 193 SLEMKIKLSENDDISTVHSKMLEENKLDMTPNITKSIETSDIDQIINDQTIEKSVETIYE 252
Query: 558 TL-KMACKLGWCVEM--FXAYCIVLDDIMD 638
TL K+ LG +E+ F CIV ++ +
Sbjct: 253 TLPKVTSPLGMKIELSNFVDACIVSSELQE 282
>UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Arthrobacter aurescens TC1|Rep: Putative
geranylgeranyl pyrophosphate synthase - Arthrobacter
aurescens (strain TC1)
Length = 369
Score = 41.5 bits (93), Expect = 0.020
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 471 NLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSV 650
N++GGK R + + +Y + K H + A + +E+ ++ DD++DG V
Sbjct: 50 NVLGGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHDDVIDGDLV 109
Query: 651 RRGMP 665
RRG P
Sbjct: 110 RRGHP 114
>UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase;
n=14; Corynebacterineae|Rep: Geranylgeranyl
pyrophosphate synthase - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 350
Score = 40.7 bits (91), Expect = 0.036
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +3
Query: 459 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMD 638
++H GGK R + +++ + EKP ++E+ +K A VE+ + DD+MD
Sbjct: 64 VMHLTRAGGKRFRPMFALLASEFGEKP--LSENVIKAAV----VVEITHLATLYHDDVMD 117
Query: 639 GSSVRRGMPCWYRRPEVGITCXFNDSLLIH 728
+S+RRG+P R + + D LL H
Sbjct: 118 EASMRRGVPSANARWDNSVAILAGDILLAH 147
>UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Rep:
Polyprenyl synthase - Deinococcus radiodurans
Length = 320
Score = 39.9 bits (89), Expect = 0.062
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 480 GGKHTRGITTVISYKTIEK-PEKV-TEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVR 653
GGK R + T+++ + + P+ + T H+ +L CVE+ + ++ DD++D S R
Sbjct: 32 GGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLHSASLLHDDLIDDSDKR 91
Query: 654 RGMPCWYRR 680
RG +RR
Sbjct: 92 RGQETAFRR 100
>UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4;
Streptomyces|Rep: Polyprenyl diphosphate synthase -
Streptomyces avermitilis
Length = 413
Score = 39.9 bits (89), Expect = 0.062
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +3
Query: 444 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVL 623
D +++ + L GGK TR +++ P E L++ G +E+ +V
Sbjct: 60 DIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRV----GAALELIQTCALVH 115
Query: 624 DDIMDGSSVRRGMP 665
DD+MDGS +RRG P
Sbjct: 116 DDVMDGSRLRRGRP 129
>UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3;
Methanomicrobiales|Rep: Polyprenyl synthetase -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 322
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +3
Query: 453 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDI 632
K H + GGK R ++S ++I K +E + A L W + +V DDI
Sbjct: 31 KAASHLLVSGGKRLRPALVLLSAESIRKG--ASEDIFQAALALEWT----HTFTLVHDDI 84
Query: 633 MDGSSVRRGMP 665
MDG S+RRG P
Sbjct: 85 MDGDSLRRGRP 95
>UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase;
n=4; Thermus thermophilus|Rep: Geranylgeranyl
diphosphate synthetase - Thermus thermophilus
Length = 344
Score = 38.7 bits (86), Expect = 0.14
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +3
Query: 384 PEVIMTLQNKSKLSEVPQIGDWLKKMLH-YNLVGGKHTRGITTVISYKTIEKPEKVTEHT 560
PE I + ++ + + +L Y GGK RG+ TV S P
Sbjct: 5 PETIRQALQERLIARLDHTDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAP------- 57
Query: 561 LKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 719
L+ + +E+F + +V DDI DGS RRG P +R + + D++
Sbjct: 58 LEAGLETATALELFQNWVLVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAM 110
>UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep:
MGC152321 protein - Bos taurus (Bovine)
Length = 350
Score = 38.3 bits (85), Expect = 0.19
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 282 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKK 458
W ++ K N++ ++S +L+ N K DLL + ++ +QN + +L E I D L++
Sbjct: 248 WEEMKPQKMNASGNLSSSSSLDRPNSKPSGADLLEKNLIEIQNLRQRLEESVFINDRLRE 307
Query: 459 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTE 554
L Y L +G S ++ P TE
Sbjct: 308 RLEYVLSDAGQGKGAAQSASDVSLTTPHSYTE 339
>UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=1;
Streptomyces sp. KO-3988|Rep: Geranylgeranyl diphosphate
synthase - Streptomyces sp. KO-3988
Length = 388
Score = 37.9 bits (84), Expect = 0.25
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 591 VEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVG 692
+E+F A+ ++ DD+MD S RRG P +R E G
Sbjct: 118 LELFHAFTLIHDDVMDASDTRRGRPTLHRTLETG 151
>UniRef50_A6C8V0 Cluster: Polyprenyl synthetase; n=1; Planctomyces
maris DSM 8797|Rep: Polyprenyl synthetase - Planctomyces
maris DSM 8797
Length = 611
Score = 37.5 bits (83), Expect = 0.33
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +3
Query: 366 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEK 545
+F+D +++ L+ K++ + +G + GGK R T+ +Y + K ++
Sbjct: 259 LFEDNFDQILPPLRTKTEAAARTPLGKTEAISYDWLKHGGKRFRPFITLAAYDALIKAQQ 318
Query: 546 V---TEHTLKMAC-KLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 713
E T + K +E+F ++ DDI D R G +R+ G+ D
Sbjct: 319 ADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQYRYGRETLHRQHGTGMAINIGD 378
Query: 714 SLL 722
L+
Sbjct: 379 YLI 381
>UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase;
n=1; uncultured euryarchaeote Alv-FOS1|Rep:
Geranylgeranyl pyrophosphate synthase - uncultured
euryarchaeote Alv-FOS1
Length = 352
Score = 37.5 bits (83), Expect = 0.33
Identities = 27/100 (27%), Positives = 50/100 (50%)
Frame = +3
Query: 360 KKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKP 539
K +D L E + K++++ P + + ++ + Y L GGK R + ++ Y+
Sbjct: 13 KSKIEDTLSEFFE--KKKTEVNH-PLLREAVEIIEEYTLRGGKRVRALLMILGYRMYGGK 69
Query: 540 EKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRG 659
+ + +K A L E+ +Y ++ DDIMD S +RRG
Sbjct: 70 D---DEIIKAAATL----ELVQSYFLIHDDIMDESDLRRG 102
>UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Rep:
Protein dopey-1 - Homo sapiens (Human)
Length = 2465
Score = 37.5 bits (83), Expect = 0.33
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 297 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 467
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 468 YNLVGGKHTRGITTV-ISYKTI 530
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3;
Bacteria|Rep: Octaprenyl-diphosphate synthase -
Candidatus Pelagibacter ubique HTCC1002
Length = 337
Score = 37.1 bits (82), Expect = 0.44
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 345 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISY 521
+I N D + E ++ ++ K K + + D ++KM Y++ GGK R + T+ S
Sbjct: 10 QINNSYYQLKDSVDEKLVLVEEKIKSKLLSDV-DLVQKMTEYHIDTGGKRLRALLTLGSA 68
Query: 522 KTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRG 659
K + + L CVEM ++ DD++D ++RRG
Sbjct: 69 KLCGYTKGGRD------INLAACVEMIHGATLMHDDVIDLGNIRRG 108
>UniRef50_A3HX57 Cluster: Putative isoprenoid biosynthesis related
protein; n=1; Algoriphagus sp. PR1|Rep: Putative
isoprenoid biosynthesis related protein - Algoriphagus
sp. PR1
Length = 328
Score = 37.1 bits (82), Expect = 0.44
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Frame = +3
Query: 351 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISYKT 527
+ EK LL ++ + +QN++ E P+ L + ++Y L +GGK R + ++++Y
Sbjct: 1 MTEKSHATALLDKLEVFIQNQN-FGESPKE---LYEPINYILNIGGKRIRPLLSLLAYGM 56
Query: 528 I-EKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCX 704
E P K+ L A +E+F + ++ DDIMD + +RRG + + + I
Sbjct: 57 YAENPGKI----LSQAS----AIEVFHNFTLMHDDIMDQAPLRRGNATVHEKWDANIAIL 108
Query: 705 FNDSLLI 725
D +L+
Sbjct: 109 SGDVMLV 115
>UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3;
Thermoplasmatales|Rep: Farnesyl pyrophosphate synthase -
Thermoplasma volcanium
Length = 354
Score = 37.1 bits (82), Expect = 0.44
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 450 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEK-VTEHTLKMACKLGWCVEMFXAYCIVLD 626
+K + Y GGK R I ++ Y+ EK + + ++ +E+ +Y ++ D
Sbjct: 43 IKIIRDYTEGGGKRLRPIFMILGYRLFSPEEKGIFDASIS--------IELAQSYLLIHD 94
Query: 627 DIMDGSSVRRGMPCWYRRPE 686
D++D S VRRG P + R E
Sbjct: 95 DVIDKSDVRRGKPSMHIRLE 114
>UniRef50_Q8UBX7 Cluster: Geranyltranstransferase; n=4;
Rhizobium/Agrobacterium group|Rep:
Geranyltranstransferase - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 335
Score = 36.7 bits (81), Expect = 0.58
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +3
Query: 402 LQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKL 581
L +++ E+ + + L+ M H L GGK R + S + + H +
Sbjct: 58 LSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLH-------V 110
Query: 582 GWCVEMFXAYCIVLDDI--MDGSSVRRGMPCWYRRPEVGITCXFNDSLL 722
G +E Y +V DD+ MD +RRG P +R+ + DSLL
Sbjct: 111 GAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLL 159
>UniRef50_Q4AET3 Cluster: Farnesyltranstransferase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Farnesyltranstransferase -
Chlorobium phaeobacteroides BS1
Length = 324
Score = 36.7 bits (81), Expect = 0.58
Identities = 29/119 (24%), Positives = 54/119 (45%)
Frame = +3
Query: 363 KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPE 542
K +D L+ L+ ++ E ++ + + + Y GGK R + T+++ +
Sbjct: 2 KNYDQLISYFEKQLEKQNFAGEPKELYEPISYTISY---GGKRIRPVLTLMACELFCGD- 57
Query: 543 KVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 719
E L+ A +E+F + ++ DDIMD + +RRG YR+ I D+L
Sbjct: 58 --AEKALQQAI----AIELFHNFTLIHDDIMDNAPIRRGRETVYRKWNGNIAILSGDTL 110
>UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase [Includes: Farnesyl pyrophosphate
synthetase (EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]; n=6; Methanococcales|Rep: Bifunctional
short chain isoprenyl diphosphate synthase [Includes:
Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP
synthetase) (Dimethylallyltranstransferase);
Geranyltranstransferase (EC 2.5.1.10)] - Methanococcus
jannaschii
Length = 327
Score = 36.7 bits (81), Expect = 0.58
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 465 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGS 644
H GGK R TV++Y ++K + E L A VE+ Y ++ DDIMD
Sbjct: 41 HLLFAGGKRIRPYLTVVTYM-LKKDD--IEEVLPAAA----AVELIHNYTLIHDDIMDND 93
Query: 645 SVRRGMP 665
RRG P
Sbjct: 94 DERRGKP 100
>UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 367
Score = 36.3 bits (80), Expect = 0.77
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 480 GGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRG 659
GGK R + + Y + V E +L L +E++ A +V DDI+D + RRG
Sbjct: 48 GGKRFRALMAHVGY-ALSSGTSVEEVSLP---HLSAALELYQASALVHDDIIDKADERRG 103
Query: 660 MPCWYRR 680
MP +RR
Sbjct: 104 MPTPHRR 110
>UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase /
dimethylallyltranstransferase; n=1; Janibacter sp.
HTCC2649|Rep: Putative polyprenyl synthase /
dimethylallyltranstransferase - Janibacter sp. HTCC2649
Length = 366
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 576 KLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYR 677
+L +E F A ++ DD+MD S RRGMP +R
Sbjct: 80 RLATAMEFFQAAALIHDDVMDDSDTRRGMPAAHR 113
>UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Polyprenyl synthetase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 283
Score = 36.3 bits (80), Expect = 0.77
Identities = 30/107 (28%), Positives = 51/107 (47%)
Frame = +3
Query: 336 KNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVI 515
KN+EI + + + + ++ L + L + + LK Y+L GGK R I +
Sbjct: 4 KNIEINPLLETYGEYIKKIDQALDKELDLYSESEFIEPLK----YSLEGGKRIRPIILTL 59
Query: 516 SYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRR 656
S ++I KV ++T +C VE I+ DDI+D ++RR
Sbjct: 60 SAESI---GKVDDNTFAASC----AVEFLHMESIIHDDIIDNETMRR 99
>UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanoculleus
marisnigri JR1|Rep: Polyprenyl synthetase -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 295
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 483 GKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGM 662
GK R + + + + T L +AC VE+ A ++LDD++DG + RRG+
Sbjct: 40 GKRMRAGLLLYIHAGLARTAAPTRQALDLAC----AVELAHAASLILDDMLDGDTARRGV 95
Query: 663 P 665
P
Sbjct: 96 P 96
>UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 73.t00020 - Entamoeba histolytica HM-1:IMSS
Length = 987
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 394 ITSGRRSSNIFFSLIISRFXEAVVIFALLFLYLISCGQYLYVTLRVILRKLN 239
+ +G + N FS I F + I L +LY I CG+ Y++++ I R N
Sbjct: 600 VFNGMKFKNDLFSAFIYSFEHDISIGILFYLYTICCGESNYMSIKEIKRAFN 651
>UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2;
Actinomycetales|Rep: Polyprenyl synthetase -
Arthrobacter sp. (strain FB24)
Length = 364
Score = 35.9 bits (79), Expect = 1.0
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +3
Query: 411 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 590
+S +S + Q D L + + GGK R + ++ TE G
Sbjct: 30 QSVMSAISQDIDPLMGSISNLVTGGKRLRALMCYWGWRGAGGEAAATE-----VVTAGSA 84
Query: 591 VEMFXAYCIVLDDIMDGSSVRRGMPCWYRR 680
+E+F A ++ DDI+D S RRG P +RR
Sbjct: 85 LELFQAAALIHDDIIDRSDTRRGGPSVHRR 114
>UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Tropheryma whipplei|Rep: Geranylgeranyl
pyrophosphate synthase - Tropheryma whipplei (strain
Twist) (Whipple's bacillus)
Length = 379
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 546 VTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRR 680
+ E+ ++ + +E+F A +V DD++D S RRG+P ++R
Sbjct: 81 IPENLFELISDIAVAIELFHAAALVHDDLIDKSDSRRGLPAVHKR 125
>UniRef50_Q6AE53 Cluster: Geranylgeranyl pyrophosphate synthase;
n=3; Actinobacteria (class)|Rep: Geranylgeranyl
pyrophosphate synthase - Leifsonia xyli subsp. xyli
Length = 372
Score = 35.5 bits (78), Expect = 1.3
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 474 LVGGKHTRGITTVISYKTIEKP-EKVTEHT------LKMACKLGWCVEMFXAYCIVLDDI 632
L GGK R + ++ + E T+ T L + +E+F A +V DD+
Sbjct: 44 LSGGKRFRALFCFWGWQAVRTSGEDATDETVTAGGPLDAVVSVASALELFHAAALVHDDL 103
Query: 633 MDGSSVRRGMPCWYRRPE 686
+D S RRG P +RR E
Sbjct: 104 IDNSDTRRGAPSVHRRFE 121
>UniRef50_Q9ZCE0 Cluster: Tyrosine recombinase xerC; n=10;
Rickettsia|Rep: Tyrosine recombinase xerC - Rickettsia
prowazekii
Length = 305
Score = 35.5 bits (78), Expect = 1.3
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 249 LKITRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSE 428
L I+ + K W + + + N +N T + N ++ + + + E++ TL N K ++
Sbjct: 2 LDISIQELIKQWQKYLILQKNYSNNTVIAYNNDLKHFLEFMNYYNSELV-TL-NHIKTAD 59
Query: 429 VPQIGDWLKKMLHYNLVGGKHTRGITTVIS-YKTIEKPEKVTEHTL 563
+ I WL K N RG++TV + YK +EK + H +
Sbjct: 60 IRLIRSWLAKRKCENFTASSIARGLSTVKNFYKFLEKTLLLNNHII 105
>UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
SCAF14344, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2446
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 297 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 467
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 468 YNLVGGKHTRGITTV-ISYKTI 530
L G H + + T I +K I
Sbjct: 73 PALPSGVHRKALETYEIIFKII 94
>UniRef50_Q2I775 Cluster: PlaT4; n=1; Streptomyces sp. Tu6071|Rep:
PlaT4 - Streptomyces sp. Tu6071
Length = 359
Score = 35.1 bits (77), Expect = 1.8
Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Frame = +3
Query: 345 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYK 524
EI +M +L + + ++ + G W L GK R TV++ +
Sbjct: 27 EIERVNRMVTPILHQAVTRFDDRLRPMVAHHFG-WPSSDLPTATTSGKMVRATLTVLTGE 85
Query: 525 TIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPC-WY 674
+ + G VEM + ++ DD+MDG RRG P W+
Sbjct: 86 CFTTDAEA----ISRVTAAGAAVEMIHNFSLIHDDVMDGDRERRGRPAVWH 132
>UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17;
Actinomycetales|Rep: Polyprenyl synthetase - Rhodococcus
sp. (strain RHA1)
Length = 346
Score = 35.1 bits (77), Expect = 1.8
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +3
Query: 420 LSEVPQIGDWLKKM-LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE 596
+SE+ D+L + LH GGK R + TV+ T + K ++ ++ A + VE
Sbjct: 45 VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVL---TAQLGPKASDPSVVTAATV---VE 98
Query: 597 MFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLLIH 728
+ + DD+MD +S+RRG P R + D L H
Sbjct: 99 LVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAGDYLFAH 142
>UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioides
sp. JS614|Rep: Polyprenyl synthetase - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 358
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 450 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDD 629
L + H ++ GGK R ++ + + E L AC +E+ A +V DD
Sbjct: 42 LVREAHTSVSGGKRFRAAFCYWGHRAVAA-DVPDETALVRACA---SLELLHASALVHDD 97
Query: 630 IMDGSSVRRGMPCWYR 677
+MD S RRG P +R
Sbjct: 98 LMDASDTRRGHPATHR 113
>UniRef50_Q5E0Z2 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 131
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 213 LHDIVDMSVFNFLKITRKVTYKY-WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPE 389
+HD M+V NF K+T K +K P L+ Y +S T K +E+++EK +
Sbjct: 26 VHDTKTMTVTNFHKLTEKDMHKIPVPDLVVYDLDSEKYTIEDK-MELLSEKSFNPFTAAQ 84
Query: 390 VIMTLQNKSKLSEVPQ 437
++ + + KL E+ Q
Sbjct: 85 NVILMGSFEKLLEMKQ 100
>UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus
lactis|Rep: Prenyl transferase - Lactococcus lactis
subsp. cremoris (strain MG1363)
Length = 326
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 480 GGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRG 659
GGK R ++ + K E +K+A L EM + ++ DDI+D S +RRG
Sbjct: 44 GGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASL----EMLHSATLIHDDIIDDSPLRRG 99
Query: 660 MP 665
MP
Sbjct: 100 MP 101
>UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain
isoprenyl diphosphate synthase; n=4;
Thermococcaceae|Rep: IdsA-like multifunctional short
chain isoprenyl diphosphate synthase - Pyrococcus abyssi
Length = 346
Score = 34.7 bits (76), Expect = 2.3
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +3
Query: 465 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGS 644
HY L GGK R + + E V + LK A +E+ Y +V DDIMD
Sbjct: 44 HYPLAGGKRIR------PFVVLTATEAVGGNALK-AIYPAVAIELIHNYSLVHDDIMDMD 96
Query: 645 SVRRGMP 665
RRG P
Sbjct: 97 ETRRGKP 103
>UniRef50_Q3ACT5 Cluster: Heptaprenyl diphosphate synthase component
II; n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Heptaprenyl diphosphate synthase component II -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 326
Score = 34.3 bits (75), Expect = 3.1
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +3
Query: 357 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKK-MLHYNLVGGKHTRGITTVISYKTIE 533
EKK+F+ L+ E + ++ + + EV + ++L +H GGK R +++
Sbjct: 8 EKKLFE-LVKEDLRKIEQEL-IKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLA----- 60
Query: 534 KPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMP 665
K+ ++ + L +E+ +V DD++D S +RRG+P
Sbjct: 61 --AKLGDYDFEKVKPLAVALELIHMATLVHDDVVDNSMLRRGLP 102
>UniRef50_O05708 Cluster: Octaprenyl-diphosphate synthase; n=1;
Treponema pallidum|Rep: Octaprenyl-diphosphate synthase
- Treponema pallidum
Length = 364
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 591 VEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 710
VE+ ++ DDI D SS RRG PC Y R G C N
Sbjct: 102 VELIHTASLLHDDIEDHSSTRRGKPCAYLR--YGTDCVLN 139
>UniRef50_Q26HU1 Cluster: Polyprenyl synthetase; n=14;
Bacteroidetes|Rep: Polyprenyl synthetase - Flavobacteria
bacterium BBFL7
Length = 327
Score = 34.3 bits (75), Expect = 3.1
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 462 LHYNL-VGGKHTRGITTVISYKTIE-KPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIM 635
+HY L +GGK R I T++S + K +K + + VE+F + ++ DDIM
Sbjct: 31 VHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAI--------AVEVFHNFTLLHDDIM 82
Query: 636 DGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
D + +RRG + + +V D++LI
Sbjct: 83 DDADLRRGKETVHVKWDVNTGILSGDAMLI 112
>UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho
melanesiensis BI429|Rep: Polyprenyl synthetase -
Thermosipho melanesiensis BI429
Length = 332
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +3
Query: 438 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCI 617
+G+ ++++ + L GK R + ++ + KV E K+A +E+ ++ +
Sbjct: 31 VGNLVEELKKFCLRPGKRIRPLLFILGVEGFGG--KVDETVYKIAAT----IEIMHSFLL 84
Query: 618 VLDDIMDGSSVRRGMP 665
+ DDIMD S +RRG P
Sbjct: 85 IHDDIMDQSELRRGQP 100
>UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n=2;
Aeropyrum pernix|Rep: Farnesylgeranyl diphosphate
synthase - Aeropyrum pernix
Length = 332
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 462 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDG 641
LH GGK R + T+++ + + E A L +E + ++ DDIMD
Sbjct: 37 LHLIKAGGKRLRPLITLLTARMLGGLEAEAR-----AIPLAASIETAHTFSLIHDDIMDR 91
Query: 642 SSVRRGMP 665
VRRG+P
Sbjct: 92 DEVRRGVP 99
>UniRef50_Q64BF4 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase; n=1; uncultured archaeon
GZfos27B6|Rep: Bifunctional short chain isoprenyl
diphosphate synthase - uncultured archaeon GZfos27B6
Length = 360
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 561 LKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 719
+K A C+E F + + DDI D S +RRG P + + + I D L
Sbjct: 81 IKKALPTAICIEFFHNFSLAHDDIEDDSKLRRGEPALHVKYGIPIAVNAGDGL 133
>UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_00285490;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00285490 - Tetrahymena thermophila SB210
Length = 1629
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 303 KNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVG 482
+ N A T+ + + N K + D +LP+V + KSK+ + Q+ D+ + N
Sbjct: 883 EENKATTTSTTSYAKTQNIKSINDIILPKVKAPPKLKSKIKKTSQVSDFQMDDFNVNNSQ 942
Query: 483 GKHTRGI-TTVISYKTIE--KPEKVTEHTL 563
+ + I + V+ Y+ IE K ++ TEH +
Sbjct: 943 KRKNQQIQSEVLKYEYIEIVKQKRETEHLM 972
>UniRef50_Q82P04 Cluster: Putative polyprenyl diphosphate synthase;
n=2; Streptomyces|Rep: Putative polyprenyl diphosphate
synthase - Streptomyces avermitilis
Length = 344
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 591 VEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 719
VE+ + ++ DDIMDG ++RRG P ++ G D+L
Sbjct: 92 VELVHTFSLLHDDIMDGDAMRRGRPALWKAYGTGPAVLAGDAL 134
>UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia
farcinica|Rep: Polyprenyl synthase - Nocardia farcinica
Length = 385
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 465 HYNLVGGKHTRGITTVISYKTIEKPEKVTEH-TLKMACKLGWCVEMFXAYCIVLDDIMDG 641
H GK R + + I P+ H L +AC W EMF +V DDI DG
Sbjct: 95 HILTAPGKRVRAGLALACAQLIPSPDAAPVHDALDIACV--W--EMFHESSLVHDDICDG 150
Query: 642 SSVRRGMP 665
S +RR P
Sbjct: 151 SPLRRDAP 158
>UniRef50_Q2JD77 Cluster: Polyprenyl synthetase; n=2; Frankia|Rep:
Polyprenyl synthetase - Frankia sp. (strain CcI3)
Length = 634
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 591 VEMFXAYCIVLDDIMDGSSVRRGMPCWYRR 680
+E+ A ++ DD+MD S RRG P +RR
Sbjct: 322 IELLHACALIHDDVMDASDTRRGRPAAHRR 351
>UniRef50_Q4W8B2 Cluster: GGPP synthase; n=2; Brevundimonas|Rep:
GGPP synthase - Brevundimonas sp. SD212
Length = 298
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 570 ACKLGWCVEMFXAYCIVLDDI--MDGSSVRRGMPCWYRR 680
A G VEM A +VLDD+ MD +++RRG P +RR
Sbjct: 75 ALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLHRR 113
>UniRef50_A7HJU8 Cluster: Polyprenyl synthetase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Polyprenyl
synthetase - Fervidobacterium nodosum Rt17-B1
Length = 341
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/102 (23%), Positives = 47/102 (46%)
Frame = +3
Query: 381 LPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHT 560
+ E I TL + K + + ++ + L GK R + ++SY + K +
Sbjct: 10 IDEKIETLCEELKKIAPENLKELIENFNEFTLRPGKRVRPLLLLLSYNGYKG--KNMDDA 67
Query: 561 LKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPE 686
+ A +E+ ++ +V DDI+D + +RRG P ++ E
Sbjct: 68 ITFAA----AIEIMHSFLLVHDDIIDNADLRRGKPTLHKTYE 105
>UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 33.9 bits (74), Expect = 4.1
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 453 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDI 632
K HY GK R + ++ IEK + TE A +E+ +V DDI
Sbjct: 71 KASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIWAA----VIEILHVASLVHDDI 126
Query: 633 MDGSSVRRGMP 665
+D S RRG+P
Sbjct: 127 LDASDTRRGIP 137
>UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 428
Score = 33.9 bits (74), Expect = 4.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 249 LKITRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSE 428
LK+ +K+T K WP +N S ++ TA N+E+ D +V N + L E
Sbjct: 310 LKVGQKITEKVWPGTQIIENQSKSLITAMINIEV-----PIDTFAKDVGSKGLNVTDLKE 364
Query: 429 VPQIGDWLKKMLHYN 473
V + D ++ + YN
Sbjct: 365 VKKCVDTIQYQMAYN 379
>UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii
SB|Rep: ATPase - Methanococcus vannielii SB
Length = 423
Score = 33.9 bits (74), Expect = 4.1
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 228 DMSVFNFLKITRKVTYKYWPQLIRYKNNSANMTTASKNLEIINE-----KKMFDDLLPEV 392
D SV N LK + Y ++ + + N+S TA N++ + + + D L +V
Sbjct: 69 DNSVLNVLKNDDSIEYNFYSKTKKL-NHSFKFLTAKTNIDDLKKLIGYFENSKDTNLADV 127
Query: 393 IMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISY-KTIEKPEKVTEHTLKM 569
+ + K E P+ WLK++L+ + HT + + Y KT V E++ +
Sbjct: 128 LKNINLSEKKEEFPE---WLKELLNSCKIYFIHTNRLNKISEYEKTKSLDLTVLEYSKDL 184
Query: 570 ACKL 581
K+
Sbjct: 185 VKKI 188
>UniRef50_A5P6P0 Cluster: Polyprenyl synthetase; n=1; Erythrobacter
sp. SD-21|Rep: Polyprenyl synthetase - Erythrobacter sp.
SD-21
Length = 350
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 561 LKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLL 722
L A + VE+ ++ DD+ D S +RRG+P + + V + D+LL
Sbjct: 75 LTQAARCAAAVELLHNALLIHDDVQDESDLRRGLPTLHAQHGVALAINAGDALL 128
>UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Farnesyltranstransferase -
Methanoregula boonei (strain 6A8)
Length = 325
Score = 33.5 bits (73), Expect = 5.4
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 441 GDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIV 620
G+ + H GGK R ++S + + + K +E+ + ++
Sbjct: 32 GELDRASAHLLSAGGKRLRPAVVMLS------ADAIRHGSSKDVMPAALALEVTHTFTLI 85
Query: 621 LDDIMDGSSVRRGMP 665
DDIMDG S+RRG+P
Sbjct: 86 HDDIMDGDSLRRGVP 100
>UniRef50_O14207 Cluster: Uncharacterized protein C6B12.02c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C6B12.02c - Schizosaccharomyces pombe (Fission yeast)
Length = 1888
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 306 NNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGG 485
N S+N T + NL+ + KK +LP +TLQ K KL G K LH +++ G
Sbjct: 254 NISSNSTVSDLNLKTL--KKRLRGVLPPSFLTLQEKKKLE---NRGVKKKTSLHKSVIEG 308
Query: 486 KHTRGI 503
+ +G+
Sbjct: 309 EKIKGV 314
>UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=2;
Deinococcus|Rep: Geranylgeranyl diphosphate synthase -
Deinococcus radiodurans
Length = 329
Score = 33.1 bits (72), Expect = 7.2
Identities = 31/118 (26%), Positives = 49/118 (41%)
Frame = +3
Query: 366 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEK 545
M +LL V+ L + S P++ + + Y GGK R + S + E
Sbjct: 1 MRPELLARVLSLLP---ETSATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSES 57
Query: 546 VTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 719
T + A L +E+F + +V DDI D S RRG P + + + D+L
Sbjct: 58 DTGW--ESALWLAAALELFQNWVLVHDDIEDDSEERRGRPALHHLCGMPVALNVGDAL 113
>UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain
isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ];
n=4; Bifidobacterium|Rep: Probably bifunctional short
chain isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ] -
Bifidobacterium longum
Length = 372
Score = 33.1 bits (72), Expect = 7.2
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +3
Query: 384 PEVIMTLQNKSKLSEVPQIGDWLKKMLHY-------NLVGGKHTRGITTVISYKTIEKPE 542
P +I ++ + ++ D LK ++ + GGK R + + ++ +
Sbjct: 25 PRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFDILAGD- 83
Query: 543 KVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMP 665
VT L +E+F +V DDI+D S +RRG P
Sbjct: 84 -VTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 123
>UniRef50_Q11XW6 Cluster: Geranyltranstransferase; n=3;
Sphingobacteriales|Rep: Geranyltranstransferase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 325
Score = 33.1 bits (72), Expect = 7.2
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 477 VGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRR 656
+GGK R + T++S + T + + A VE+F + ++ DDIMD + +RR
Sbjct: 38 LGGKRMRPLLTILSNYIFTED---TNNVMNAAI----AVEVFHNFTLMHDDIMDNAPLRR 90
Query: 657 GMPCWYRRPEVGITCXFNDSLLI 725
G + + I D +L+
Sbjct: 91 GKATVHAKWNTNIAILSGDVMLV 113
>UniRef50_Q0GQQ6 Cluster: Cys-loop ligand-gated ion channel subunit;
n=3; Endopterygota|Rep: Cys-loop ligand-gated ion
channel subunit - Apis mellifera (Honeybee)
Length = 510
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 447 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCI 617
W+ +H + GITTV++ TI + ++ A L W + M YCI
Sbjct: 263 WVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCI 319
>UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 415
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 537 PEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMP 665
PE++ H AC+LGW +++DD+ D S +RRG+P
Sbjct: 158 PERIGSHN---ACQLGW----LHTASLLVDDVEDSSLLRRGIP 193
>UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1;
Staphylothermus marinus F1|Rep: Polyprenyl synthetase -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 365
Score = 33.1 bits (72), Expect = 7.2
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 468 YNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSS 647
Y L GGK R +I Y + K + L +E +Y +V DDIMD
Sbjct: 47 YTLRGGKRLRAFLVLIGYWS----RKWGYGNIDSIKYLMAGIEFLQSYLLVHDDIMDEDE 102
Query: 648 VRRGMP---CWYRR 680
+RRG P W+ R
Sbjct: 103 IRRGGPTVHVWFDR 116
>UniRef50_A1RWE7 Cluster: Polyprenyl synthetase; n=1; Thermofilum
pendens Hrk 5|Rep: Polyprenyl synthetase - Thermofilum
pendens (strain Hrk 5)
Length = 302
Score = 33.1 bits (72), Expect = 7.2
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 468 YNLVGGKHTRG-ITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGS 644
Y L GGK RG ++ +++ + EKV L VE+ A +V DDI D S
Sbjct: 39 YALFGGKMLRGTLSLLVASMFTAQVEKVLPIAL--------AVELMHAASLVHDDIADAS 90
Query: 645 SVRRGMPCWYRR 680
RRG P ++ +
Sbjct: 91 PTRRGRPSFWSK 102
>UniRef50_Q31Q84 Cluster: Phage late control gene D protein GPD;
n=2; Synechococcus elongatus|Rep: Phage late control
gene D protein GPD - Synechococcus sp. (strain PCC 7942)
(Anacystis nidulans R2)
Length = 480
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 339 NLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGK 488
+L +++E + D V + L ++ KL E+P+ G WLK L Y GGK
Sbjct: 25 SLTVVDEAEQLSD---RVEIVLDDRDKLLEIPKSGTWLKVYLGY-AEGGK 70
>UniRef50_Q2RM43 Cluster: Polyprenyl synthetase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Polyprenyl synthetase -
Moorella thermoacetica (strain ATCC 39073)
Length = 320
Score = 32.7 bits (71), Expect = 9.5
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 450 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDD 629
L+++L Y L GGK R + + + A ++ +E+ +V DD
Sbjct: 21 LQELLDYALEGGKGLRPTLVFLC-------ARFGIYDALEAGRVAAAIELVHLASLVHDD 73
Query: 630 IMDGSSVRRGMPCWYR 677
I+DG++VRR P YR
Sbjct: 74 ILDGAAVRRNRPALYR 89
>UniRef50_Q9S5E9 Cluster: SelF-HepPS; n=1; Synechococcus
elongatus|Rep: SelF-HepPS - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 324
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 570 ACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYR 677
A + VE+ + ++ DDIMD S +RRG P YR
Sbjct: 60 AAPVAAAVEILHNFTLIHDDIMDRSPLRRGRPTVYR 95
>UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Streptomyces griseus|Rep: Geranylgeranyl
pyrophosphate synthase - Streptomyces griseus
Length = 425
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 570 ACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWY 674
A +LG +E+ + ++ DD+MD S +RRG P +
Sbjct: 106 ALRLGVALELIQSCALIHDDVMDRSRLRRGKPAMH 140
>UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4;
Alphaproteobacteria|Rep: Polyprenyl synthetase -
Hyphomonas neptunium (strain ATCC 15444)
Length = 337
Score = 32.7 bits (71), Expect = 9.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +3
Query: 372 DDLLP-EVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKV 548
DDL E ++ + S ++ +P + ++ GGK R + T+I+ + K
Sbjct: 26 DDLAAVERLLATRAASPVAVIPDLSGYIVS------AGGKRLRPMITLIAAHAVGKANAA 79
Query: 549 TEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMP 665
T H L A VE ++ DD++D S +RRG P
Sbjct: 80 T-HALAAA------VEFIHTATLLHDDVVDESDLRRGKP 111
>UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1;
Arthrobacter aurescens TC1|Rep: Putative polyprenyl
synthetase - Arthrobacter aurescens (strain TC1)
Length = 364
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 582 GWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRR 680
G +E+F A ++ DDI+D S RRG P ++R
Sbjct: 82 GCALELFQAAALIHDDIIDRSDTRRGGPSVHKR 114
>UniRef50_Q9HQI3 Cluster: Geranylgeranyl diphosphate synthase; n=5;
Halobacteriaceae|Rep: Geranylgeranyl diphosphate
synthase - Halobacterium salinarium (Halobacterium
halobium)
Length = 347
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 531 EKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 710
E P+ + H M+ + +E+ ++ ++ DDIMD +RRG P +R +
Sbjct: 75 EFPDCIGGHVDVMSAAVS--IEVIQSFTLIHDDIMDDDDLRRGSPAVHREYDTETAILAG 132
Query: 711 DSL 719
D+L
Sbjct: 133 DTL 135
>UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6;
Thermoproteales|Rep: Polyprenyl synthetase - Pyrobaculum
aerophilum
Length = 334
Score = 32.7 bits (71), Expect = 9.5
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 444 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVL 623
D+ +++ GGK R + T+ + + I K A VE+ Y ++
Sbjct: 30 DFRDAVMYQVKTGGKRLRPLLTLATAEAISGQ-------WKPALPAAAIVELIHNYSLIY 82
Query: 624 DDIMDGSSVRRGMP 665
DDI+D +RRGMP
Sbjct: 83 DDIIDRGDLRRGMP 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,959,564
Number of Sequences: 1657284
Number of extensions: 15165821
Number of successful extensions: 34999
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 33874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34974
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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