Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_M06
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.27 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    26   0.27 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.47 
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    24   1.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.4  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   1.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = -1

Query: 427 SDNLDLFCSVI--ITSGRRSSNIFFS--LIISRFXEAV-VIFALLFLYLISCGQYLYVTL 263
           SDNL + C +   +TS  +  N  FS  L++S       V+F   +LY ++ G+  +VT+
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTV 286

Query: 262 RVIL 251
            +I+
Sbjct: 287 PMIV 290


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = -1

Query: 427 SDNLDLFCSVI--ITSGRRSSNIFFS--LIISRFXEAV-VIFALLFLYLISCGQYLYVTL 263
           SDNL + C +   +TS  +  N  FS  L++S       V+F   +LY ++ G+  +VT+
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTV 286

Query: 262 RVIL 251
            +I+
Sbjct: 287 PMIV 290


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/58 (20%), Positives = 27/58 (46%)
 Frame = -1

Query: 463 SIFFNQSPIWGTSDNLDLFCSVIITSGRRSSNIFFSLIISRFXEAVVIFALLFLYLIS 290
           S+ FNQ   W + +    F    + +    S +F+  +  +F   + +F ++ +Y+ S
Sbjct: 38  SLIFNQEQ-WSSLNKNFQFIDKKLNNRNSKSRVFYENVNFQFGSILALFGVVQIYIFS 94


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 RTRYVSIFNTSVHVAIHSRG 139
           R  Y SIF   VH A+ SRG
Sbjct: 82  REVYESIFKVEVHEALMSRG 101


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 RTRYVSIFNTSVHVAIHSRG 139
           R  Y SIF   VH A+ SRG
Sbjct: 242 REVYESIFKVEVHEALMSRG 261


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 198 RTRYVSIFNTSVHVAIHSRG 139
           R  Y SIF   VH A+ SRG
Sbjct: 242 REVYESIFKVEVHEALMSRG 261


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 486 KHTRGITTVISYKTIEKPE 542
           KH  GI  VI Y   +KPE
Sbjct: 76  KHKEGIRKVIHYLVKQKPE 94


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 519 YKTIEKPEKVTEHTLKMACK 578
           Y+ ++KP+K+T+ ++    K
Sbjct: 292 YQEVKKPKKITDFSISAIMK 311


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 367 IFFSLIISRFXEAVVIFALLFLYLI 293
           +FF L I  F  A +IF +  L+L+
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLL 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,377
Number of Sequences: 336
Number of extensions: 4105
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)