Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_M06
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical pr...    62   4e-10
Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical pr...    30   1.9  
CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical ...    30   1.9  
AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    29   4.5  

>Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical
           protein R06C1.2 protein.
          Length = 352

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 26/91 (28%), Positives = 51/91 (56%)
 Frame = +3

Query: 453 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFXAYCIVLDDI 632
           + +    ++GGK++R    V + + ++   +     L+  C+    +E+  ++ ++ DDI
Sbjct: 42  RNLFDNTVIGGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI 101

Query: 633 MDGSSVRRGMPCWYRRPEVGITCXFNDSLLI 725
           MD S  RRG PCW+RR  VG++   ND+ ++
Sbjct: 102 MDNSETRRGKPCWFRREGVGMSA-INDAFIM 131


>Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical
           protein F40F9.8 protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 354 NEKKMFDDLLPEVIMTLQNKSKLSEVPQ 437
           N +  FDDLLP V++ +QN+    + P+
Sbjct: 42  NGRVSFDDLLPRVVLAIQNEEWKDDTPK 69


>CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical
           protein C50E10.9 protein.
          Length = 357

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = -2

Query: 621 AQCNMXETFRHTIPVYKPFSKYVR*LFPVFQLFCMKSQ*LFLLYVYRQPNCNEASFST-- 448
           A+ N  E F + +     +S  +  L  +F + C K   L  LY++R+   N  S ++  
Sbjct: 275 AESNYWEVFGYILDFVVSYSNCIIVLIVIFSVPCWKKSFLRPLYMFRRMQSNRVSMASQE 334

Query: 447 -NPLFGALQITWICF 406
            +P   A QI+ I F
Sbjct: 335 KDPEEDARQISSIYF 349


>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/67 (20%), Positives = 30/67 (44%)
 Frame = +3

Query: 351 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTI 530
           I    M DD+   ++   + + KL +  ++ DW ++ + +NL        +   ++   I
Sbjct: 81  IKHSVMIDDVQKVIVEQKEKRDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAI 140

Query: 531 EKPEKVT 551
             PE V+
Sbjct: 141 TYPELVS 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,483,588
Number of Sequences: 27780
Number of extensions: 376688
Number of successful extensions: 924
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)