Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M04
(755 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 255 8e-67
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 250 3e-65
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 237 3e-61
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 233 3e-60
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 229 6e-59
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 227 2e-58
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 225 9e-58
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 221 1e-56
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 218 1e-55
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 217 2e-55
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 209 5e-53
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 200 2e-50
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 200 3e-50
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 200 4e-50
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 198 1e-49
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 198 2e-49
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 193 3e-48
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 187 3e-46
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 184 2e-45
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 180 3e-44
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 180 3e-44
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 177 3e-43
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 175 7e-43
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 172 9e-42
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 170 3e-41
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 167 2e-40
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 164 2e-39
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 161 2e-38
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 157 4e-37
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 156 6e-37
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 151 2e-35
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 150 3e-35
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 149 6e-35
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 146 7e-34
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 130 5e-29
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 128 1e-28
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 123 5e-27
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 122 1e-26
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 119 9e-26
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 115 1e-24
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 113 6e-24
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 113 6e-24
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 112 8e-24
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 111 2e-23
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 110 4e-23
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 108 1e-22
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 106 7e-22
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 105 9e-22
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 104 2e-21
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 104 3e-21
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 103 4e-21
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 102 1e-20
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 98 2e-19
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 98 2e-19
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 97 5e-19
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 96 1e-18
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 96 1e-18
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 95 1e-18
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 91 2e-17
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 91 3e-17
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 91 4e-17
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 89 8e-17
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 89 1e-16
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 89 1e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 88 2e-16
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 88 2e-16
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 88 3e-16
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 88 3e-16
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 3e-16
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 87 4e-16
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 87 6e-16
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 85 2e-15
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 84 4e-15
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 83 9e-15
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 81 2e-14
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 81 3e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 3e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 81 3e-14
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 79 1e-13
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 79 2e-13
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 79 2e-13
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 77 6e-13
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 75 1e-12
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 73 6e-12
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 73 6e-12
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 73 8e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 1e-11
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 72 1e-11
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 71 4e-11
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 68 2e-10
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 65 2e-09
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 64 5e-09
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 61 3e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 57 4e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 57 4e-07
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 47 4e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 47 6e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.050
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 40 0.050
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 37 0.47
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 37 0.62
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 35 2.5
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 255 bits (625), Expect = 8e-67
Identities = 132/208 (63%), Positives = 140/208 (67%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILI 734
FDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 193 FDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 250 bits (612), Expect = 3e-65
Identities = 130/205 (63%), Positives = 138/205 (67%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 96 NMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSI 155
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTS
Sbjct: 156 LGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTS 215
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEV 722
FFDPAGGGDPILYQHLF FFGHP++
Sbjct: 216 FFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 2 RK*IYSTNHKDIGTLYFI 55
RK +YSTNHKDIGTLYFI
Sbjct: 1 RKWLYSTNHKDIGTLYFI 18
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 237 bits (579), Expect = 3e-61
Identities = 125/216 (57%), Positives = 138/216 (63%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 100 NMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSI 159
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S Q PLFV +V ITA A IT+LLTDRNLNT+
Sbjct: 160 LGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 219
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FFDPAGGGDPILYQHLF FFGHPEVYILI PGFG+I
Sbjct: 220 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMI 255
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 233 bits (570), Expect = 3e-60
Identities = 122/216 (56%), Positives = 135/216 (62%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S Q PLFV AV +TA A IT+LLTDRNLNT+
Sbjct: 159 LGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTT 218
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FFDPAGGGDPILYQHLF FFGHPEVYILI PGFGII
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGII 254
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 229 bits (560), Expect = 6e-59
Identities = 119/216 (55%), Positives = 135/216 (62%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
+ Q PLFV +V +TA A IT+LLTDRNLNT+
Sbjct: 159 LGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTT 218
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FFDPAGGGDPILYQHLF FFGHPEVYILI PGFG+I
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMI 254
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 227 bits (555), Expect = 2e-58
Identities = 118/216 (54%), Positives = 135/216 (62%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 99 NMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSI 158
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
+ Q PLFV +V ITA A IT+LLTDRNLNT+
Sbjct: 159 LGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 218
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FFDPAGGGDPILYQHLF FFGHPEVYILI PGFG+I
Sbjct: 219 FFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMI 254
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 225 bits (550), Expect = 9e-58
Identities = 123/216 (56%), Positives = 143/216 (66%)
Frame = -2
Query: 697 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 518
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 517 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 338
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 337 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 158
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 157 L*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPQNK 50
L I S PI PG PNSARIKSL DVP +P P+ K
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMK 214
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 221 bits (541), Expect = 1e-56
Identities = 114/215 (53%), Positives = 133/215 (61%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FDP+GGGDPILYQHLF FFGHPEVYILI PGFGII
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFGII 238
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 218 bits (533), Expect = 1e-55
Identities = 115/217 (52%), Positives = 132/217 (60%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ +LPLFV A+ +TA AGAIT+LLTDRN NT
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNT 217
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
SF+DPAGGGDPILYQHLF FFGHPEVYILI PGFG++
Sbjct: 218 SFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMV 254
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 217 bits (530), Expect = 2e-55
Identities = 112/217 (51%), Positives = 133/217 (61%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 101 NNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ +LPLFV +V +TAF AGAIT+LLTDRN NT
Sbjct: 161 ILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNT 220
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+FFDPAGGGDPILYQHLF FFGHPEVYILI PGFGII
Sbjct: 221 TFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGII 257
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 11 IYSTNHKDIGTLYFI 55
++STNHKDIGTLYFI
Sbjct: 8 LFSTNHKDIGTLYFI 22
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 209 bits (511), Expect = 5e-53
Identities = 109/217 (50%), Positives = 133/217 (61%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 106 NNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
S ++PLFV ++ +TAF AGAIT+LLTDRN NT
Sbjct: 166 ILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNT 225
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
SFFD +GGGDPILYQHLF FFGHPEVYILI PGFG+I
Sbjct: 226 SFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMI 262
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 200 bits (489), Expect = 2e-50
Identities = 105/196 (53%), Positives = 118/196 (60%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 651 FDPAGGGDPILYQHLF 698
FDPAGGGDPILYQHLF
Sbjct: 203 FDPAGGGDPILYQHLF 218
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 200 bits (488), Expect = 3e-50
Identities = 108/216 (50%), Positives = 124/216 (57%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
NI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 100 NISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSL 159
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
+L LF AV ITA AG IT++LTDRN NTS
Sbjct: 160 LGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTS 219
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FF+ AGGGDPILYQHLF FFGHPEVYILI PGFGII
Sbjct: 220 FFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGII 255
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 200 bits (487), Expect = 4e-50
Identities = 108/217 (49%), Positives = 127/217 (58%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ +LPLFV ++ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNT 218
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
SFF+ +GGGDPILY+HLF FFGHPEVYILI PGFGII
Sbjct: 219 SFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGII 255
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 198 bits (483), Expect = 1e-49
Identities = 103/200 (51%), Positives = 121/200 (60%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
I F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 101 ISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSIL 160
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ ++PLFV +V ITA AGAIT+LLTDR NT+F
Sbjct: 161 GAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTF 220
Query: 651 FDPAGGGDPILYQHLF*FFG 710
FDPAGGGDPILYQHLF FFG
Sbjct: 221 FDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 198 bits (482), Expect = 2e-49
Identities = 106/217 (48%), Positives = 126/217 (58%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
S ++PLFV A+ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNT 218
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
SFF+ AGGGDPI YQH F FFGHPEVYILI PGFGI+
Sbjct: 219 SFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIV 255
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 193 bits (471), Expect = 3e-48
Identities = 102/216 (47%), Positives = 123/216 (56%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ + I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSL 185
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
+L LF AV ITA A AIT+LLTDRNLNTS
Sbjct: 186 LGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTS 245
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
F++ AGGGD ILYQHLF FFGHPEVYILI PGFGII
Sbjct: 246 FYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGII 281
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 187 bits (455), Expect = 3e-46
Identities = 99/217 (45%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN F E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
LPLFV +V +T+F A AIT+LL DRN NT
Sbjct: 162 IVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNT 221
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
SF+DP GGGD +LYQHLF FFGHPEVYILI PGFG++
Sbjct: 222 SFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLV 258
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 184 bits (448), Expect = 2e-45
Identities = 100/198 (50%), Positives = 115/198 (58%), Gaps = 2/198 (1%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ +LPLFV A+ +TA AGAIT+LLTDRN NT
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNT 217
Query: 645 SFFDPAGGGDPILYQHLF 698
SF+DPAGGGDPILYQHLF
Sbjct: 218 SFYDPAGGGDPILYQHLF 235
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 180 bits (439), Expect = 3e-44
Identities = 90/212 (42%), Positives = 122/212 (57%)
Frame = +3
Query: 120 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 659
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 660 AGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+GGGDP+LY+H+F FFGHPEVYILI P FG++
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVV 272
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 180 bits (439), Expect = 3e-44
Identities = 90/212 (42%), Positives = 122/212 (57%)
Frame = +3
Query: 120 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 659
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 660 AGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+GGGDP+LY+H+F FFGHPEVYILI P FG++
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVV 272
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 177 bits (430), Expect = 3e-43
Identities = 99/220 (45%), Positives = 121/220 (55%), Gaps = 5/220 (2%)
Frame = +3
Query: 111 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAG 455
NI F I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G
Sbjct: 128 NISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSG 187
Query: 456 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 635
+SS +L LF + IT++LTDRN
Sbjct: 188 VSSLLGSINFITTVANMRTPGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRN 240
Query: 636 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI PGFGII
Sbjct: 241 FNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGII 280
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 175 bits (427), Expect = 7e-43
Identities = 88/218 (40%), Positives = 121/218 (55%), Gaps = 2/218 (0%)
Frame = +3
Query: 108 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 281
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 282 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 641
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 642 TSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+I P FG+I
Sbjct: 323 TTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVI 360
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 172 bits (418), Expect = 9e-42
Identities = 93/206 (45%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 330 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 497
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 498 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 677
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Query: 678 ILYQHLF*FFGHPEVYILIXPGFGII 755
LYQHLF FFGHPEVYI+I PGFGII
Sbjct: 272 ELYQHLFWFFGHPEVYIMILPGFGII 297
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 170 bits (414), Expect = 3e-41
Identities = 95/210 (45%), Positives = 116/210 (55%), Gaps = 2/210 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ +LPLFV ++ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNT 218
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILI 734
SFF+ +GGGDPILY+HLF FFG I++
Sbjct: 219 SFFEVSGGGDPILYEHLFWFFGQTVATIIM 248
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 167 bits (407), Expect = 2e-40
Identities = 92/184 (50%), Positives = 105/184 (57%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 88 NMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSI 147
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S Q PLFV AV ITA A IT+LLTDRNLNT+
Sbjct: 148 LGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 207
Query: 648 FFDP 659
FFDP
Sbjct: 208 FFDP 211
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 164 bits (398), Expect = 2e-39
Identities = 90/202 (44%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ +LPLFV A+ ITA + +T+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNT 218
Query: 645 SFFDPAGGGDPILYQHLF*FFG 710
SFF+ AGGGDPILY+HLF FFG
Sbjct: 219 SFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 161 bits (390), Expect = 2e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +3
Query: 246 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 425
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 426 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 605
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 606 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 713
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 157 bits (380), Expect = 4e-37
Identities = 88/209 (42%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
++ +PLF AV TA A +T+ + DRN NT
Sbjct: 164 LLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNT 223
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYIL 731
SFF+ AGGGD +LYQHLF ++ HPEV I+
Sbjct: 224 SFFEYAGGGDAVLYQHLFYWWNHPEVKII 252
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 156 bits (378), Expect = 6e-37
Identities = 82/207 (39%), Positives = 114/207 (55%), Gaps = 2/207 (0%)
Frame = +3
Query: 120 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 659
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 660 AGGGDPILYQHLF*FFGH--PEVYILI 734
+GGGDP+LY+H+F FFG P + I+I
Sbjct: 241 SGGGDPLLYEHIFWFFGQIWPIIIIII 267
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 151 bits (366), Expect = 2e-35
Identities = 79/210 (37%), Positives = 104/210 (49%)
Frame = +3
Query: 126 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 305
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 306 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 485
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 486 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 665
SF LF+ A ITA AG +T++L DRN NTSF+D G
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG 227
Query: 666 GGDPILYQHLF*FFGHPEVYILIXPGFGII 755
GGD IL+QH+F FFGHPEVYI++ P FG+I
Sbjct: 228 GGDLILFQHIFWFFGHPEVYIILLPVFGLI 257
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 150 bits (364), Expect = 3e-35
Identities = 80/217 (36%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + F + G G+ T YPPLS S+D I LH GI S
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGS 167
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ DQ+ +FV +T+F AG++ LL DRN NT
Sbjct: 168 LLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNT 227
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
SF+D GG+P+LYQHLF FFGHPEVY++I P FGII
Sbjct: 228 SFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGII 264
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 149 bits (362), Expect = 6e-35
Identities = 83/211 (39%), Positives = 115/211 (54%)
Frame = +3
Query: 120 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 659
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 660 AGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
+GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 241 SGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 146 bits (353), Expect = 7e-34
Identities = 78/216 (36%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ + G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 102 LSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIA 161
Query: 471 XXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
F L P+ + + T+ A +T+LL DR+ +TS
Sbjct: 162 GSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTS 221
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
F+ P GGGDPIL+QHLF FFGHPEVYILI P FG+I
Sbjct: 222 FYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVI 257
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 130 bits (313), Expect = 5e-29
Identities = 71/203 (34%), Positives = 100/203 (49%), Gaps = 1/203 (0%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 330 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXX 506
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 507 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 686
+ L + ++ IT+ G + +LL+D + NT FFDP GDPILY
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILY 237
Query: 687 QHLF*FFGHPEVYILIXPGFGII 755
QHLF FFGHPEVYILI P FG+I
Sbjct: 238 QHLFWFFGHPEVYILILPAFGVI 260
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 128 bits (310), Expect = 1e-28
Identities = 68/203 (33%), Positives = 98/203 (48%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 327 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 506
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSV 177
Query: 507 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 686
D++ ++ +T+F ++ DR+ NT FF+ + GDP+LY
Sbjct: 178 KTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLY 237
Query: 687 QHLF*FFGHPEVYILIXPGFGII 755
QHLF FFGHPEVYI+I PGFGII
Sbjct: 238 QHLFWFFGHPEVYIMILPGFGII 260
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 123 bits (296), Expect = 5e-27
Identities = 75/202 (37%), Positives = 95/202 (47%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
+YN +VT H N +P+ L D+ PR+N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 330 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 509
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 211 ELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRL 267
Query: 510 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 689
S + V A T+ A IT+LL DRN T+FF+P+GGGDPIL+Q
Sbjct: 268 SFNCS-----IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQ 322
Query: 690 HLF*FFGHPEVYILIXPGFGII 755
HLF FFGHPEVY+LI PGFGI+
Sbjct: 323 HLFWFFGHPEVYVLILPGFGIV 344
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 122 bits (294), Expect = 1e-26
Identities = 72/167 (43%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 605
+ +LPLFV A+ +TA AG
Sbjct: 158 MLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 119 bits (286), Expect = 9e-26
Identities = 74/214 (34%), Positives = 101/214 (47%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F ++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 95 LSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLI 145
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ L LF ++ + + A IT++LTD++L T F
Sbjct: 146 SSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCF 203
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
+D GGDP+LYQHLF FFGHPEVY++I P FG+
Sbjct: 204 YDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGL 237
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 115 bits (277), Expect = 1e-24
Identities = 68/207 (32%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 333 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 509
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 510 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 674
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 675 PILYQHLF*FFGHPEVYILIXPGFGII 755
PIL+QHLF FGHPEVYI+I P +GI+
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGIL 292
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 113 bits (271), Expect = 6e-24
Identities = 68/215 (31%), Positives = 94/215 (43%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
F + + G Y PLSS + VD I L + GI S
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVS 178
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
S ++PLFV + + A A+ +LL DR L ++F
Sbjct: 179 GAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAF 238
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FDP GG +L+QH F FGHPEVYILI PGFG+I
Sbjct: 239 FDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMI 273
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 113 bits (271), Expect = 6e-24
Identities = 80/223 (35%), Positives = 105/223 (47%), Gaps = 8/223 (3%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 291 IRFXXX--XXXXXXXXXXXIVEN-GAGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLH 446
I F I E A TG T+Y PLS N A+ G VDL + LH
Sbjct: 181 IAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLH 238
Query: 447 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 626
L+G+S+ S+ L +F + + AI +LL
Sbjct: 239 LSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLF 298
Query: 627 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
DRN TSFF AG G IL+QHLF FFGHPEVYI++ P GII
Sbjct: 299 DRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGII 339
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 112 bits (270), Expect = 8e-24
Identities = 66/209 (31%), Positives = 95/209 (45%)
Frame = +3
Query: 123 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 302
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 303 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 482
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 483 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 662
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 663 GGGDPILYQHLF*FFGHPEVYILIXPGFG 749
GGDP++YQ++F F+ HP VY+ + P FG
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFG 208
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 111 bits (267), Expect = 2e-23
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 330 XXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 503
++ +G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKY 182
Query: 504 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 683
+F + ++ ++ +T+ AIT LL DRN+N++ +D G DP+L
Sbjct: 183 NRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVL 240
Query: 684 YQHLF*FFGHPEVYILIXPGFGI 752
YQHLF FFGHPEVY++I P FG+
Sbjct: 241 YQHLFWFFGHPEVYVIILPVFGL 263
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 110 bits (264), Expect = 4e-23
Identities = 71/215 (33%), Positives = 93/215 (43%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F V G T YPPLS G +L I SL L G SS
Sbjct: 114 VAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSIL 170
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+PLF A+ T+ A A+ +L D TSF
Sbjct: 171 GAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSF 230
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
F+P GGGDP++YQHLF F+ HP VYI+I P FG+I
Sbjct: 231 FNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVI 265
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 108 bits (260), Expect = 1e-22
Identities = 69/216 (31%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ ++ G TG T Y P S AH +V +F + G SS
Sbjct: 130 LSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIV 185
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTS 647
++ ++PLFV A+ T+ G + +L+T NL
Sbjct: 186 TGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFG 244
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FDPA GGDP+L+QHLF F+ HP VYI++ P FG++
Sbjct: 245 MFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVM 280
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 106 bits (254), Expect = 7e-22
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 291 IRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGIS 461
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 641
S F ++P+FV G +LL D +
Sbjct: 183 SIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFG 242
Query: 642 TSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
TSFF P GGGDP+L+QH F F+ HP VY+L+ P FGI
Sbjct: 243 TSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGI 279
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 105 bits (253), Expect = 9e-22
Identities = 68/216 (31%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 ELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
+L P + IG D+ YN I T H LVPL++G IAFPR+N
Sbjct: 57 QLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
+ V+ G G Y PLS G+ D+ + +S+
Sbjct: 115 AFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSAL 174
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S D++PLFV ++ +T+F A T L+ DR + T
Sbjct: 175 AIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTH 234
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FF+PA GGD +L+QHLF FFGHPEVYI+ P G++
Sbjct: 235 FFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMV 270
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 104 bits (250), Expect = 2e-21
Identities = 68/215 (31%), Positives = 90/215 (41%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNA 117
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ V G Y PL+ VD I + L G++S
Sbjct: 118 LSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIA 177
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ +++PLFV + AF A LL DR+ T F
Sbjct: 178 GALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRF 237
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
F P GGD +L+QHLF FFGHPEVYILI P GII
Sbjct: 238 FLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGII 272
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 104 bits (249), Expect = 3e-21
Identities = 63/215 (29%), Positives = 92/215 (42%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F +V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 123 LSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSIL 178
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ +LPLFV ++ T+ ++ ++ +
Sbjct: 179 TGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGI 238
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FDPA GGDP+L+QH F F+ HP VYI++ P +I
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVI 273
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 103 bits (248), Expect = 4e-21
Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 291 IRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
I F ++ A T T+Y PLS ++ +VD+ + LHL G+S+
Sbjct: 155 IAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSA 212
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ L +F + + A+ +LL DRN T
Sbjct: 213 TMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGT 272
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+FF AGG DPI +QHLF FFGHPEVY+L+ P GI+
Sbjct: 273 TFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIV 308
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 102 bits (244), Expect = 1e-20
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 1/217 (0%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
F + GA G T+Y PLS I G D+ I + GI S
Sbjct: 124 AFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGS 183
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
+ ++P+F + + + A +L DR L
Sbjct: 184 VASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGG 243
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+DPA GG +L+QHLF FFGHPEVY+L P FGI+
Sbjct: 244 HLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIV 279
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 98.3 bits (234), Expect = 2e-19
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 407
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 408 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 587
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 588 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+ P G+
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGL 263
Query: 753 I 755
+
Sbjct: 264 V 264
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 97.9 bits (233), Expect = 2e-19
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 407
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 408 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 587
G +DLA ++ L +S + ++P+F ++ T
Sbjct: 148 PGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWA 207
Query: 588 XXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILIXPGFG 749
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G
Sbjct: 208 FPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALG 260
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 96.7 bits (230), Expect = 5e-19
Identities = 62/215 (28%), Positives = 87/215 (40%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
N+ F ++ G T Y PL+SN G + + L +AGI +
Sbjct: 139 NLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTL 198
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
+ ++P+F IT A+ +L DR
Sbjct: 199 MTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAH 258
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
FF GG P+L+ +LF +GHPEVYI+I P FGI
Sbjct: 259 FFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGI 293
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 95.9 bits (228), Expect = 1e-18
Identities = 56/214 (26%), Positives = 91/214 (42%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P + Q YN ++T H N +VPL +GA D++FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ F + G T Y LS + +G +D + L ++G+ +
Sbjct: 111 LGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLI 168
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
++ +LPLF + + + +++ DR T+F
Sbjct: 169 AGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNF 228
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
F+P GG+ ++++HLF FGHPEVYILI P FGI
Sbjct: 229 FNPELGGNTVIWEHLFWIFGHPEVYILILPAFGI 262
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 95.9 bits (228), Expect = 1e-18
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 291 IRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
+ GA G T Y P S A VD + ++ L G SS
Sbjct: 112 FSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGFSSL 168
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S ++P++V +V + A ++L +R + S
Sbjct: 169 LGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLS 228
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+F+PA GGDP+L+Q F F+ HP VY+++ P GI+
Sbjct: 229 WFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGIL 264
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 95.5 bits (227), Expect = 1e-18
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 327 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 494
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 495 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 659
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 660 ------AGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
AGGG P+L+QHLF F+ HP VYI+I P G++
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMV 303
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/95 (51%), Positives = 57/95 (60%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 392
N+ F VE GAGTG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 91.1 bits (216), Expect = 3e-17
Identities = 70/230 (30%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Frame = +3
Query: 111 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 288 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 458
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 635
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 636 LNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
L TSFF P GGG P+L+QHLF FFGHPEVYI+ P FGI+
Sbjct: 245 LGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIV 294
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 90.6 bits (215), Expect = 4e-17
Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Frame = +3
Query: 111 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
+ + + T YPP S I H + FS+ L G +S
Sbjct: 102 ALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVLLLGFASI 158
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNT 644
+++L +FV A + AF G A+T+L D+ + T
Sbjct: 159 LGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGT 217
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FFD A GGD + YQ+LF F+ HP VY++ P ++
Sbjct: 218 HFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMV 254
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 89.4 bits (212), Expect = 8e-17
Identities = 51/173 (29%), Positives = 77/173 (44%)
Frame = +3
Query: 237 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 416
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 417 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 596
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 597 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ P G++
Sbjct: 244 LIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMV 296
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 89.0 bits (211), Expect = 1e-16
Identities = 68/197 (34%), Positives = 80/197 (40%)
Frame = +3
Query: 114 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 293
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 294 RFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXX 473
F + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLG 150
Query: 474 XXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 653
++ LF A AIT+L R N SFF
Sbjct: 151 SMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFF 210
Query: 654 DPAGGGDPILYQHLF*F 704
P G P + F F
Sbjct: 211 XPXXXGXPXXFPTFFXF 227
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 88.6 bits (210), Expect = 1e-16
Identities = 59/200 (29%), Positives = 83/200 (41%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y+ I TAH N +VPL +GA D+AFP +N++ F
Sbjct: 100 YDQIFTAHGVIMIIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVN 158
Query: 333 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 512
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 159 LSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRA 218
Query: 513 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 692
+P+F GA+ +L DR L+ FF GG+ ++Y +
Sbjct: 219 PGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLN 278
Query: 693 LF*FFGHPEVYILIXPGFGI 752
LF +GHPEVYIL+ P FGI
Sbjct: 279 LFWAWGHPEVYILVLPAFGI 298
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 88.2 bits (209), Expect = 2e-16
Identities = 58/215 (26%), Positives = 87/215 (40%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P + + Y+++ T H N L PL+LG+ D+AFPR+
Sbjct: 77 QLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPRLTA 135
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ + G Y PL+S G ++D+ + L GIS+
Sbjct: 136 FSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLGISTTG 195
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
S D+LP+ V + + A +L DRN T F
Sbjct: 196 GAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHF 255
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FD A GG P+L+QHLF F HP VY+++ P GI+
Sbjct: 256 FDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIV 290
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 88.2 bits (209), Expect = 2e-16
Identities = 66/217 (30%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Frame = +3
Query: 108 AELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
AEL PG+ I D +N + T H N VP+++ D+A+P++
Sbjct: 47 AELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMVRYKDMAYPKL 105
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N I F + T PP S I+ G + D+ IF L + GISS
Sbjct: 106 NAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWIFGLKILGISS 159
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 644
S Q+PL + ++ A A+ +LLTDR +
Sbjct: 160 ILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVS 219
Query: 645 SFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FF+PA GGDPI Y HLF F HPEVY+L+ P G++
Sbjct: 220 GFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMM 256
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 87.8 bits (208), Expect = 3e-16
Identities = 58/215 (26%), Positives = 86/215 (40%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P + D + YN + + H ++PL+LG D+ FPR+N
Sbjct: 64 QLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTFPRLNA 122
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 470
+ ++ G YPPL+ G +D + IS+
Sbjct: 123 FGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTFMEISALV 182
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
S +++P+FV AV + +F A +L DR F
Sbjct: 183 AAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHF 242
Query: 651 FDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
F A GDPIL+QHLF FFGHPEVYI+ P G++
Sbjct: 243 FT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMV 276
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 87.8 bits (208), Expect = 3e-16
Identities = 65/218 (29%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Frame = +3
Query: 141 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 320
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 321 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 488
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 489 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP--- 659
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIY 277
Query: 660 -AG------GGDPILYQHLF*FFGHPEVYILIXPGFGI 752
AG GG P+L+QHLF F GHPEVYI++ P GI
Sbjct: 278 IAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGI 315
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 87.8 bits (208), Expect = 3e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 291 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 87.0 bits (206), Expect = 4e-16
Identities = 58/216 (26%), Positives = 84/216 (38%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
A+L P S + YN + T H L+P +LG+ D+AFPR+
Sbjct: 56 AQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRLT 114
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
F + +G +YPPLSS + G + D + + IS+
Sbjct: 115 AYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAI 174
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S ++P+F +TA +L +R +
Sbjct: 175 AAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMP 234
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FF A GGD +L+QHLF FGHPEVYI+ P G I
Sbjct: 235 FFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAI 270
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 86.6 bits (205), Expect = 6e-16
Identities = 58/200 (29%), Positives = 81/200 (40%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y+ I TAH N VPL +GA D+AFP +N++ F
Sbjct: 99 YDQIFTAHGVIMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVN 157
Query: 333 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 512
V A TG YPPL+ G VD I++L L+G+ +
Sbjct: 158 ISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRA 217
Query: 513 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 692
+P+F A+ +L DR L+ F GG+P++Y +
Sbjct: 218 PGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVN 277
Query: 693 LF*FFGHPEVYILIXPGFGI 752
LF +GHPEVYILI P FG+
Sbjct: 278 LFWAWGHPEVYILILPAFGV 297
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 85.0 bits (201), Expect = 2e-15
Identities = 60/219 (27%), Positives = 87/219 (39%), Gaps = 4/219 (1%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 291 IRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
+ ++ G G Y L+S G D L L GI
Sbjct: 116 FSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGI 175
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 638
+ + ++P+FV +T+ A+ +L+ DR
Sbjct: 176 GTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTF 235
Query: 639 NTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+FF+ GG + YQHLF FGHPEVYILI P GII
Sbjct: 236 AANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGII 274
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 83.8 bits (198), Expect = 4e-15
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 407
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 408 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 587
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMIIA 196
Query: 588 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
+ +R T FFD A GG P+L+Q LF FFGHPEVYILI P G++
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLV 252
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 82.6 bits (195), Expect = 9e-15
Identities = 56/208 (26%), Positives = 81/208 (38%)
Frame = +3
Query: 132 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 311
L+G D YN I T H L+P +L A D+ FPR++
Sbjct: 75 LVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYI 132
Query: 312 XXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 491
+ G +YPPL+ G + D + + IS+
Sbjct: 133 VGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIV 192
Query: 492 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 671
S ++P+F A+ I A A +L +R+ FF GG
Sbjct: 193 GTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGG 252
Query: 672 DPILYQHLF*FFGHPEVYILIXPGFGII 755
DP+L+QHLF FFGHPEVYI+ P G++
Sbjct: 253 DPLLWQHLFWFFGHPEVYIIFLPAAGLV 280
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 81.4 bits (192), Expect = 2e-14
Identities = 55/216 (25%), Positives = 85/216 (39%)
Frame = +3
Query: 108 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 287
A+L +P S + Y + T H L+P +LG+ D+A+PR++
Sbjct: 56 AQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRLS 114
Query: 288 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 467
F + +G +YPPL+S + G + D + + IS+
Sbjct: 115 AYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITFVEISAI 174
Query: 468 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
S D++P++ +TA +L +R
Sbjct: 175 AAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLP 234
Query: 648 FFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
FF A GGD +L+QHLF FGHPEVYI+ P G I
Sbjct: 235 FFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAI 270
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 81.0 bits (191), Expect = 3e-14
Identities = 53/174 (30%), Positives = 73/174 (41%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 410
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 411 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 590
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 591 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
L DR L+ FF GG+ + + ++F FGHPEVYILI P FG+
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGV 317
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 246 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 425
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 426 LAIFS 440
LAI+S
Sbjct: 61 LAIYS 65
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 545 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 712
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 81.0 bits (191), Expect = 3e-14
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +3
Query: 366 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 536
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 537 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 716
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 717 EVYILIXPGFGII 755
EVY+LI P FG I
Sbjct: 403 EVYVLIIPTFGFI 415
Score = 37.9 bits (84), Expect = 0.27
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 111 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 285 NNIRF 299
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 79.0 bits (186), Expect = 1e-13
Identities = 63/229 (27%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Frame = +3
Query: 117 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 296
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 297 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 461
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 641
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 642 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILIXPGFGII 755
TSFF P+G GG +L+QHLF FFGHPEVYI I P GI+
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIV 302
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 78.6 bits (185), Expect = 2e-13
Identities = 48/173 (27%), Positives = 74/173 (42%)
Frame = +3
Query: 237 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 416
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 417 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 596
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 597 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ P G++
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMV 339
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 78.6 bits (185), Expect = 2e-13
Identities = 49/174 (28%), Positives = 75/174 (43%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 410
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 411 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 590
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 591 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
+ + DR L+T F+ GG +LY +L +GHPEVYILI P FGI
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGI 292
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 76.6 bits (180), Expect = 6e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +3
Query: 633 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
N T+FFDPAGGGD IL+QHLF FFGHPEVYILI PGFG+I
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMI 231
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 75.4 bits (177), Expect = 1e-12
Identities = 54/217 (24%), Positives = 83/217 (38%), Gaps = 14/217 (6%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 327 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 497
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 498 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 665
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 666 -------GGDPILYQHLF*FFGHPEVYILIXPGFGII 755
GG P+L+QHLF F+ HP VYI++ P G++
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMV 306
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 73.3 bits (172), Expect = 6e-12
Identities = 49/200 (24%), Positives = 73/200 (36%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
YN ++T HA N +PL LG D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVV 133
Query: 333 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 512
G T Y PL+ + G SV + L+ G+ S
Sbjct: 134 LGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRA 191
Query: 513 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 692
++P+F ++ T+ A + + L S F+P GG P+LYQ
Sbjct: 192 PGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQ 251
Query: 693 LF*FFGHPEVYILIXPGFGI 752
F F+ HP VY+++ P GI
Sbjct: 252 FFWFYSHPAVYVMLLPYLGI 271
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 73.3 bits (172), Expect = 6e-12
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Frame = +3
Query: 237 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 413
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 414 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 593
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 594 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFG 749
G +LL ++ S++ GG +++++LF +FGHPEVY+L+ PG G
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTG 281
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 72.9 bits (171), Expect = 8e-12
Identities = 44/168 (26%), Positives = 70/168 (41%)
Frame = +3
Query: 237 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 416
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 417 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 596
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 597 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 740
+ +R + FFDP GGDP+L+QHLF FGHPEVYI+ P
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +3
Query: 384 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 563
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 564 TAFXXXXXXXXXAGAITILLTDR 632
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 218 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 343
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/99 (43%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 401
NNI F VE GAGTG TV LS I
Sbjct: 98 NNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 70.5 bits (165), Expect = 4e-11
Identities = 46/175 (26%), Positives = 72/175 (41%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 410
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 411 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 590
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 591 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGII 755
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++ P FG I
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFI 317
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 68.1 bits (159), Expect = 2e-10
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 13/188 (6%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN--IA 404
N LVPL +GA D+AFPR+N + + G T+Y PL++ I
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIP 148
Query: 405 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 584
G + +L + + +P+F ++ +T +
Sbjct: 149 GEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLF 208
Query: 585 XXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYIL 731
A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+
Sbjct: 209 AFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIV 268
Query: 732 IXPGFGII 755
P G++
Sbjct: 269 FFPALGVM 276
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +3
Query: 111 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 377
NNI F +VE G G+G TV
Sbjct: 102 NNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 63.7 bits (148), Expect = 5e-09
Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 401
NNI F +VE GAGTG TV SS +
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/41 (68%), Positives = 29/41 (70%)
Frame = +2
Query: 632 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNXTRIWYN 754
K KYIIF S W F+STFILIFWT SLYFN T IWYN
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYN 47
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 342 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +3
Query: 528 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 707
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 708 GHPEVYILI 734
GH +V LI
Sbjct: 72 GHTDVLFLI 80
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 111 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 377
NNI F +VE+GAGTG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 548 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 700
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.2 bits (107), Expect = 4e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +2
Query: 224 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 403
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 404 T*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 583
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 584 XTTCFSWSYYNIINRSKLKY 643
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.8 bits (106), Expect = 6e-04
Identities = 39/172 (22%), Positives = 62/172 (36%)
Frame = +3
Query: 237 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 416
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 417 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 596
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 597 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPGFGI 752
+ L+D + F+ G P+ Y F F HPEVY+ I P F I
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.050
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +3
Query: 411 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 590
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 591 XXXAGAITILLTDRNLNT 644
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 40.3 bits (90), Expect = 0.050
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 702 FFGHPEVYILIXPGFGII 755
FFGHPEVYILI PGFG+I
Sbjct: 2 FFGHPEVYILILPGFGMI 19
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 37.1 bits (82), Expect = 0.47
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 702 FFGHPEVYILIXPGFGII 755
FFGHPEVY+LI P FGI+
Sbjct: 1 FFGHPEVYVLILPVFGIV 18
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 36.7 bits (81), Expect = 0.62
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 689 TFILIFWTS*SLYFNXTRIWYN 754
+ ++IFW+S SLYFN IWYN
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYN 23
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +2
Query: 560 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNXT 739
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 740 RI 745
I
Sbjct: 154 SI 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,976,484
Number of Sequences: 1657284
Number of extensions: 9799825
Number of successful extensions: 22020
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 20251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21760
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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