Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M03
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 36 0.22
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 36 0.22
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 36 0.22
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 36 0.22
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 36 0.22
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 36 0.22
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 36 0.22
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 35 0.29
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 35 0.29
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 35 0.29
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 35 0.29
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 41
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG H + +KIR S FRR K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG HG + +KIR S F+R K
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPK 50
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG HG + +KIR S F+R K
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPK 50
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG HG + +KIR S F+R K
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPK 50
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 35.1 bits (77), Expect = 0.29
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 687 KALKAXRKVVKGEHGKRVRKIRNSVHFRRXK 779
KALKA + V+KG HG + +KIR S F+R K
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPK 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,716,783
Number of Sequences: 237096
Number of extensions: 723221
Number of successful extensions: 1664
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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