Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L20
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09584-1|AAA92281.1|  351|Homo sapiens PL6 protein protein.           176   6e-44
CR457020-1|CAG33301.1|  351|Homo sapiens PL6 protein.                 176   6e-44
BC017367-1|AAH17367.1|  351|Homo sapiens transmembrane protein 1...   176   6e-44
BC011948-1|AAH11948.1|  351|Homo sapiens transmembrane protein 1...   176   6e-44
AC002481-1|AAB67308.1|  247|Homo sapiens PL6 protein, unknown fu...    96   1e-19
Z84492-1|CAM28372.1|   57|Homo sapiens protein ( Human DNA seque...    54   5e-07

>U09584-1|AAA92281.1|  351|Homo sapiens PL6 protein protein.
          Length = 351

 Score =  176 bits (429), Expect = 6e-44
 Identities = 89/237 (37%), Positives = 130/237 (54%)
 Frame = +2

Query: 32  RNLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSFQLWS 211
           R LP  RQ   A+L + S  VK +C  V+  Y+LSF+ D    L+VTPGYL PP+F +W+
Sbjct: 3   RALPGARQHLGAILASASVVVKALCAAVLFLYLLSFAVDT-GCLAVTPGYLFPPNFWIWT 61

Query: 212 TFTFWFLEIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYLVIF 391
             T   +E H+W+V I + TV + G+L+EPLWG +E++ FF + N  V  L  F YL+ +
Sbjct: 62  LATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTY 121

Query: 392 ACTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTPLGKLTNRSXXXXXXXXXXX 571
             +    YLF + +HG  G+L  V VA+KQ M D ++++ P  +++              
Sbjct: 122 MASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLR 181

Query: 572 XXXXXXXXGTYPCMWGSGTILSWIYLRFWQRHTNGTRGDMAXXXXXXXXXPTVLQPV 742
                         +G G + SW+YLRF+QRH+ G RGDMA         P +LQPV
Sbjct: 182 LATLLQSPAL--ASYGFGLLSSWVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPV 235


>CR457020-1|CAG33301.1|  351|Homo sapiens PL6 protein.
          Length = 351

 Score =  176 bits (429), Expect = 6e-44
 Identities = 89/237 (37%), Positives = 130/237 (54%)
 Frame = +2

Query: 32  RNLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSFQLWS 211
           R LP  RQ   A+L + S  VK +C  V+  Y+LSF+ D    L+VTPGYL PP+F +W+
Sbjct: 3   RALPGARQHLGAILASASVVVKALCAAVLFLYLLSFAVDT-GCLAVTPGYLFPPNFWIWT 61

Query: 212 TFTFWFLEIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYLVIF 391
             T   +E H+W+V I + TV + G+L+EPLWG +E++ FF + N  V  L  F YL+ +
Sbjct: 62  LATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTY 121

Query: 392 ACTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTPLGKLTNRSXXXXXXXXXXX 571
             +    YLF + +HG  G+L  V VA+KQ M D ++++ P  +++              
Sbjct: 122 MASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLR 181

Query: 572 XXXXXXXXGTYPCMWGSGTILSWIYLRFWQRHTNGTRGDMAXXXXXXXXXPTVLQPV 742
                         +G G + SW+YLRF+QRH+ G RGDMA         P +LQPV
Sbjct: 182 LATLLQSPAL--ASYGFGLLSSWVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPV 235


>BC017367-1|AAH17367.1|  351|Homo sapiens transmembrane protein 115
           protein.
          Length = 351

 Score =  176 bits (429), Expect = 6e-44
 Identities = 89/237 (37%), Positives = 130/237 (54%)
 Frame = +2

Query: 32  RNLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSFQLWS 211
           R LP  RQ   A+L + S  VK +C  V+  Y+LSF+ D    L+VTPGYL PP+F +W+
Sbjct: 3   RALPGARQHLGAILASASVVVKALCAAVLFLYLLSFAVDT-GCLAVTPGYLFPPNFWIWT 61

Query: 212 TFTFWFLEIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYLVIF 391
             T   +E H+W+V I + TV + G+L+EPLWG +E++ FF + N  V  L  F YL+ +
Sbjct: 62  LATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTY 121

Query: 392 ACTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTPLGKLTNRSXXXXXXXXXXX 571
             +    YLF + +HG  G+L  V VA+KQ M D ++++ P  +++              
Sbjct: 122 MASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLR 181

Query: 572 XXXXXXXXGTYPCMWGSGTILSWIYLRFWQRHTNGTRGDMAXXXXXXXXXPTVLQPV 742
                         +G G + SW+YLRF+QRH+ G RGDMA         P +LQPV
Sbjct: 182 LATLLQSPAL--ASYGFGLLSSWVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPV 235


>BC011948-1|AAH11948.1|  351|Homo sapiens transmembrane protein 115
           protein.
          Length = 351

 Score =  176 bits (429), Expect = 6e-44
 Identities = 89/237 (37%), Positives = 130/237 (54%)
 Frame = +2

Query: 32  RNLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSFQLWS 211
           R LP  RQ   A+L + S  VK +C  V+  Y+LSF+ D    L+VTPGYL PP+F +W+
Sbjct: 3   RALPGARQHLGAILASASVVVKALCAAVLFLYLLSFAVDT-GCLAVTPGYLFPPNFWIWT 61

Query: 212 TFTFWFLEIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYLVIF 391
             T   +E H+W+V I + TV + G+L+EPLWG +E++ FF + N  V  L  F YL+ +
Sbjct: 62  LATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTY 121

Query: 392 ACTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTPLGKLTNRSXXXXXXXXXXX 571
             +    YLF + +HG  G+L  V VA+KQ M D ++++ P  +++              
Sbjct: 122 MASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLR 181

Query: 572 XXXXXXXXGTYPCMWGSGTILSWIYLRFWQRHTNGTRGDMAXXXXXXXXXPTVLQPV 742
                         +G G + SW+YLRF+QRH+ G RGDMA         P +LQPV
Sbjct: 182 LATLLQSPAL--ASYGFGLLSSWVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPV 235


>AC002481-1|AAB67308.1|  247|Homo sapiens PL6 protein, unknown
           function but deleted in small cell lung cancer protein.
          Length = 247

 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 40/104 (38%), Positives = 64/104 (61%)
 Frame = +2

Query: 203 LWSTFTFWFLEIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYL 382
           +W+  T   +E H+W+V I + TV + G+L+EPLWG +E++ FF + N  V  L  F YL
Sbjct: 1   IWTLATHGLMEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYL 60

Query: 383 VIFACTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTP 514
           + +  +    YLF + +HG  G+L  V VA+KQ M D ++++ P
Sbjct: 61  LTYMASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVP 104



 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +2

Query: 641 IYLRFWQRHTNGTRGDMAXXXXXXXXXPTVLQPV 742
           + LR  QRH+ G RGDMA         P +LQPV
Sbjct: 99  VVLRVPQRHSRG-RGDMADHFAFATFFPEILQPV 131


>Z84492-1|CAM28372.1|   57|Homo sapiens protein ( Human DNA sequence
           from clone XXcos-11 on chromosome 3. ).
          Length = 57

 Score = 54.0 bits (124), Expect = 5e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = +2

Query: 32  RNLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSF 199
           R LP  RQ   A+L + S  VK +C  V+  Y+LSF+ D    L+VTPGYL PP+F
Sbjct: 3   RALPGARQHLGAILASASVVVKALCAAVLFLYLLSFAVDT-GCLAVTPGYLFPPNF 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,675,456
Number of Sequences: 237096
Number of extensions: 2605646
Number of successful extensions: 6141
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6133
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)