Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_L20
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68297-4|CAB54220.1| 356|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z81463-8|CAB03849.2| 346|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF036694-9|ABO16454.1| 219|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF022979-9|AAB69904.1| 466|Caenorhabditis elegans Hypothetical ... 29 2.6
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64609-4|AAB04601.3| 336|Caenorhabditis elegans Serpentine rece... 29 4.6
AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical ... 29 4.6
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z79605-5|CAB01907.2| 316|Caenorhabditis elegans Hypothetical pr... 28 8.0
U64836-3|AAG24058.1| 175|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z68297-4|CAB54220.1| 356|Caenorhabditis elegans Hypothetical
protein F11A10.6 protein.
Length = 356
Score = 56.0 bits (129), Expect = 3e-08
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 1/219 (0%)
Frame = +2
Query: 35 NLPYLRQQFAALLGNTSPSVKFICVVVVIGYILSFSDDVVNVLSVTPGYLLPPSFQLWST 214
+L + ++ + +L N + +F+ V+ +IGYI+S+ +L + P + S +LW
Sbjct: 9 DLQIVVERHSDVLRNNALPFRFLVVLRIIGYIISYLHFARLLLWLHPYQIA--SIELWRI 66
Query: 215 FTFWFLEIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFILTNFGVAFLTTFYYLVIFA 394
T F ++ +V+ V + L+ ++K + +T F+ + + +
Sbjct: 67 ATSTFCGHNVLDVLWTVWCLHFGTNLVRLNNTNESLLKLYAITQGVTTFVIVVFAYLTYI 126
Query: 395 CTGQTSYLFDIHVHGLAGYLAAVSVAVKQIMPDHLLIKTPLGKLTNRSXXXXXXXXXXXX 574
+ + + G+ A+V V +KQ +PD +++ TPLG++
Sbjct: 127 LFDSIKFFYIEPLVGMTPICASVMVLMKQFLPDTIVLATPLGRIKYAHLPFLAIFVSFIL 186
Query: 575 XXXXXXXGTYPCMWGSGTILSWIYLRFWQRH-TNGTRGD 688
G +SW YLRF++ H T+ GD
Sbjct: 187 ALTKFTYFVSFLQITIGVQVSWTYLRFYKPHETDEIYGD 225
>Z81463-8|CAB03849.2| 346|Caenorhabditis elegans Hypothetical
protein C06B8.6 protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 188 PPSFQLWSTFTFWFLEIHLWEVIIDVV-TVGLCGKLIEPLWG--QMEMMKFF-ILTNFGV 355
PPS S+ F L H W +D+V ++ +C L+ PL+ + ++++F I T + V
Sbjct: 52 PPSM---SSVKFSLLTFHFWTCFVDIVFSILVCPFLVAPLYAGCTLGLLQYFEINTEYQV 108
Query: 356 AFL 364
F+
Sbjct: 109 MFI 111
>AF036694-9|ABO16454.1| 219|Caenorhabditis elegans Hypothetical
protein CD4.1 protein.
Length = 219
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 308 GQMEMM-KFFILTNFGVAFLTTFYYLVIFAC 397
G+M+MM FF++ F V+F F VIF+C
Sbjct: 58 GEMDMMIGFFLMNGFCVSFFLLFGLCVIFSC 88
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 246 HKCISRNQN-VKVDHS*NEGGSKYPGVTLSTLTTSSENDNIYPITTTTQINFTEGDVFPN 70
HKC S N + + ++HS G Y +END I P + Q + TE D+FP+
Sbjct: 52 HKCSSTNMSTIGLEHS---DGRVY------FFEFCAENDTILPHVCSCQPDVTEKDLFPD 102
Query: 69 NAANC 55
A C
Sbjct: 103 YAVWC 107
>AF022979-9|AAB69904.1| 466|Caenorhabditis elegans Hypothetical
protein T02B11.6 protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 218 TFWFL-EIHLWEVIIDVVTVGLCGKLIEPLWGQMEMMKFFI--LTNFGVAFLTTFYYLVI 388
++W L I L + I + G +I W + + FF+ LT F F T V
Sbjct: 126 SYWLLLAIRLIQGIAYAADFAVIG-IICVKWAPHDEVAFFVSVLTVFS-PFATVITTAVT 183
Query: 389 -FACTGQTSYLFDIHVHGLAGYLAAV 463
F CT + F +VH +AG L V
Sbjct: 184 GFLCTSSLGWRFSFYVHSIAGALCFV 209
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 120 ITTTTQINFTEGDVFPNNAANCCRK 46
+TT TQ+ + EGD +PN +C R+
Sbjct: 1322 LTTPTQLPYFEGDFWPNVIEDCIRE 1346
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 120 ITTTTQINFTEGDVFPNNAANCCRK 46
+TT TQ+ + EGD +PN +C R+
Sbjct: 1311 LTTPTQLPYFEGDFWPNVIEDCIRE 1335
>U64609-4|AAB04601.3| 336|Caenorhabditis elegans Serpentine
receptor, class m protein2 protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 FFILTNFGVAFLTTFYYLVIFACTGQT-SYLFDIHV 433
FF+ + G FLT F + V+ +C T YL HV
Sbjct: 88 FFLPFDMGTFFLTLFVFFVVISCCSPTIQYLQICHV 123
>AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical
protein W02F12.3 protein.
Length = 388
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 267 TTSMITSHKCISRNQNVKVDHS*NEGGSKYPGVTLSTLTTSSENDNI 127
T+ I K +SR V V H NE + YP L TTS + I
Sbjct: 319 TSGFIRKGKSLSRQMKVSVAHFWNEYKTVYPSERLPAPTTSPGSPKI 365
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 165 LSTLTTSSENDNIYPITTTTQINFTEGDV 79
++TLTT+ N+ +Y T Q+N T G V
Sbjct: 34 VNTLTTTVNNNPVYHYTPAPQVNSTPGTV 62
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical protein
F56G4.1 protein.
Length = 975
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 302 LWGQMEMMKFFILTNFGVAFLTTFYYLVIFACTGQTSYLFDIHVHG 439
L QM F+ N AFL TF+ L++ A + SY++ + G
Sbjct: 918 LASQMMEEDTFLCQNKFFAFLITFFTLMVLALVLRVSYMYYVSKQG 963
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical protein
F56G4.1 protein.
Length = 975
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 302 LWGQMEMMKFFILTNFGVAFLTTFYYLVIFACTGQTSYLFDIHVHG 439
L QM F+ N AFL TF+ L++ A + SY++ + G
Sbjct: 918 LASQMMEEDTFLCQNKFFAFLITFFTLMVLALVLRVSYMYYVSKQG 963
>Z79605-5|CAB01907.2| 316|Caenorhabditis elegans Hypothetical
protein ZK678.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = +2
Query: 179 YLLPPSFQLWSTFTFWFLEIHLWEVIIDVVTVGLCGKLI-----EPLWGQMEMMKFFILT 343
Y +P S + F +WF +H W + +TV + E W + +FIL
Sbjct: 92 YTIPGSLTWFKYFPYWFFHMHFWTSAL--LTVHRLSSIFLFHRYESFWSRW----YFILL 145
Query: 344 NFGVAFLTTFYYLVIFACTGQTSYLFDIHV 433
F +A + + +L + TG +L+++++
Sbjct: 146 IFAIACICS--HLPKYLWTG---FLYEVYI 170
>U64836-3|AAG24058.1| 175|Caenorhabditis elegans Hypothetical
protein F10G2.4 protein.
Length = 175
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -2
Query: 198 NEGGSKYPGVTLSTLTTSSENDNIYPITTTTQINFTEGDVFPNNAANCCRKYGRLR 31
+E +K + + T +S ND+++ T +++ E ++ N RK RLR
Sbjct: 61 DEENAKSESPSSQSTTATSTNDDLFASVGTWEVHANENNITVNKKKKRSRKIRRLR 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,893,711
Number of Sequences: 27780
Number of extensions: 390897
Number of successful extensions: 1182
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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