Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L19
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein ...   182   4e-46
AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p pro...   182   4e-46
AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light...   182   4e-46
AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-P...   182   4e-46
AY113461-1|AAM29466.1|  173|Drosophila melanogaster RE37471p pro...    51   1e-06
AJ863565-1|CAI10732.1|  173|Drosophila melanogaster dynein light...    51   1e-06
AE014297-1064|AAF54474.1|  173|Drosophila melanogaster CG5359-PA...    51   1e-06
BT024239-1|ABC86301.1|  179|Drosophila melanogaster IP16258p pro...    41   0.001
AE014296-2507|AAF49639.1|  142|Drosophila melanogaster CG7276-PA...    41   0.001
AE014296-2506|AAS64993.1|  171|Drosophila melanogaster CG7276-PB...    41   0.001
BT025003-1|ABE01233.1|   97|Drosophila melanogaster IP05158p pro...    40   0.002
AY070813-1|AAL48435.1|  189|Drosophila melanogaster AT23443p pro...    30   2.8  
AE013599-556|AAF59159.1|  189|Drosophila melanogaster CG14763-PA...    30   2.8  
AY051638-1|AAK93062.1|  400|Drosophila melanogaster GH28857p pro...    28   8.4  
AE014297-3354|AAF56160.2|  400|Drosophila melanogaster CG16705-P...    28   8.4  

>Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein
           protein.
          Length = 111

 Score =  182 bits (442), Expect = 4e-46
 Identities = 81/105 (77%), Positives = 90/105 (85%)
 Frame = +1

Query: 109 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 288
           +D  EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 2   DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61

Query: 289 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           +VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p
           protein.
          Length = 111

 Score =  182 bits (442), Expect = 4e-46
 Identities = 81/105 (77%), Positives = 90/105 (85%)
 Frame = +1

Query: 109 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 288
           +D  EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 2   DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61

Query: 289 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           +VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light
           chain subunit protein.
          Length = 111

 Score =  182 bits (442), Expect = 4e-46
 Identities = 81/105 (77%), Positives = 90/105 (85%)
 Frame = +1

Query: 109 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 288
           +D  EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 2   DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61

Query: 289 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           +VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-PA
           protein.
          Length = 111

 Score =  182 bits (442), Expect = 4e-46
 Identities = 81/105 (77%), Positives = 90/105 (85%)
 Frame = +1

Query: 109 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 288
           +D  EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT  VVE+CL  LTK QKPYKY
Sbjct: 2   DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61

Query: 289 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           +VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 62  IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AY113461-1|AAM29466.1|  173|Drosophila melanogaster RE37471p
           protein.
          Length = 173

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 133 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 306
           F +  +  I+   +   +    Y  +   +WTS + +    Q+  + L K YK+VV   +
Sbjct: 69  FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128

Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
            Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>AJ863565-1|CAI10732.1|  173|Drosophila melanogaster dynein light
           chain protein.
          Length = 173

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 133 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 306
           F +  +  I+   +   +    Y  +   +WTS + +    Q+  + L K YK+VV   +
Sbjct: 69  FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128

Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
            Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>AE014297-1064|AAF54474.1|  173|Drosophila melanogaster CG5359-PA
           protein.
          Length = 173

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 133 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 306
           F +  +  I+   +   +    Y  +   +WTS + +    Q+  + L K YK+VV   +
Sbjct: 69  FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128

Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
            Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>BT024239-1|ABC86301.1|  179|Drosophila melanogaster IP16258p
           protein.
          Length = 179

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 130 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 303
           +F +  +  +I + ++  +    Y  +   +WT  V +   +    +   P +K+VV   
Sbjct: 74  KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 133

Query: 304 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 134 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 173


>AE014296-2507|AAF49639.1|  142|Drosophila melanogaster CG7276-PA,
           isoform A protein.
          Length = 142

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 130 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 303
           +F +  +  +I + ++  +    Y  +   +WT  V +   +    +   P +K+VV   
Sbjct: 37  KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 96

Query: 304 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 97  LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 136


>AE014296-2506|AAS64993.1|  171|Drosophila melanogaster CG7276-PB,
           isoform B protein.
          Length = 171

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 130 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 303
           +F +  +  +I + ++  +    Y  +   +WT  V +   +    +   P +K+VV   
Sbjct: 66  KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 125

Query: 304 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
           + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 126 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 165


>BT025003-1|ABE01233.1|   97|Drosophila melanogaster IP05158p
           protein.
          Length = 97

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +1

Query: 157 IIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCTILQKNGAGL 330
           +I + ++  +    Y  +   +WT  V +   +    +   P +K+VV   + Q+ GAG 
Sbjct: 1   MIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVMLYQQTGAGC 60

Query: 331 HTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 423
              +   WD  +D   T  ++  +  CI +V
Sbjct: 61  FYGARAIWDELSDDYITFTFDGGSFICIAAV 91


>AY070813-1|AAL48435.1|  189|Drosophila melanogaster AT23443p
           protein.
          Length = 189

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
 Frame = +1

Query: 115 LDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQK--PYKY 288
           L+ +N    + V  IIK  +          H   +   +A V   +    KL     Y+Y
Sbjct: 79  LESKNPLNKERVENIIKAVMNRHYNDEYMFHPKHSLHMAAQVSEEIKNRIKLDNYDRYRY 138

Query: 289 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCI 414
           +V  T+ +    GL++  +  WD   DG  T   E  + + +
Sbjct: 139 IVLVTVGEFLMQGLYSMVNFLWDAEKDGFVTYSVERPSYFAV 180


>AE013599-556|AAF59159.1|  189|Drosophila melanogaster CG14763-PA
           protein.
          Length = 189

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
 Frame = +1

Query: 115 LDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQK--PYKY 288
           L+ +N    + V  IIK  +          H   +   +A V   +    KL     Y+Y
Sbjct: 79  LESKNPLNKERVENIIKAVMNRHYNDEYMFHPKHSLHMAAQVSEEIKNRIKLDNYDRYRY 138

Query: 289 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCI 414
           +V  T+ +    GL++  +  WD   DG  T   E  + + +
Sbjct: 139 IVLVTVGEFLMQGLYSMVNFLWDAEKDGFVTYSVERPSYFAV 180


>AY051638-1|AAK93062.1|  400|Drosophila melanogaster GH28857p
           protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVR 387
           L K+GA LH+     WD  TD  CT +
Sbjct: 188 LDKSGAVLHSVRLGEWDTRTDPDCTTQ 214


>AE014297-3354|AAF56160.2|  400|Drosophila melanogaster CG16705-PA
           protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 307 LQKNGAGLHTSSSCYWDNTTDGSCTVR 387
           L K+GA LH+     WD  TD  CT +
Sbjct: 188 LDKSGAVLHSVRLGEWDTRTDPDCTTQ 214


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,965,389
Number of Sequences: 53049
Number of extensions: 511999
Number of successful extensions: 1080
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)