Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_L15
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 196 2e-50
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 102 2e-22
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 101 7e-22
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 99 4e-21
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 64 1e-10
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 29 3.4
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 5.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 5.9
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 196 bits (477), Expect = 2e-50
Identities = 84/179 (46%), Positives = 132/179 (73%)
Frame = +2
Query: 194 LTSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQRARY 373
LT+VA++G DAAV+A Q++VPD L+ +VT ++ ++ +GC GMI D++ Q++RA+
Sbjct: 37 LTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQG 96
Query: 374 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDP 553
EAA+W+YK G ++P +L +++AD++Q YTQNAEMR LGC+++ I+YDDE GP VY+ DP
Sbjct: 97 EAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDP 156
Query: 554 SGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSXI 730
+GYY K V+ G K + ++LEKK+KK+S+L++ +AI+LAI L L +D +S +
Sbjct: 157 AGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDL 215
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +1
Query: 85 MARESSAGFDRHITIFSPEGRLYQVEYALKAIN 183
M+R SSAGFDRHITIFSPEGR+YQVEYA KAIN
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAIN 33
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 102 bits (245), Expect = 2e-22
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Frame = +2
Query: 197 TSVALRGTDAAVVAAQRKVPDRLLDPASVTH-LFALTDRIGCVMTGMIADSRSQVQRARY 373
T + + ++ VVAA+RK +LLD + +T ++ L+D I C + G+ AD+ + R+
Sbjct: 33 TCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRW 92
Query: 374 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDP 553
AA+++ YG E+PV L + + + Q YTQ RP G S++ I +D G +Y++DP
Sbjct: 93 WAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDP 152
Query: 554 SGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSXI 730
SG Y +KA G+ L+++ K + ++A QLAI L + L V S +
Sbjct: 153 SGNYTGWKATCIGSNHQAAVTLLKQEYKSP---NLEEAKQLAIKVLWKTLDVKLASEKV 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 109 FDRHITIFSPEGRLYQVEYALKAIN 183
+D TIFSPEGRLYQVEYA++AI+
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIS 29
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 101 bits (241), Expect = 7e-22
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Frame = +2
Query: 185 RGGLTSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQR 364
+ G SV LR D V+A + V L D ++ IGCV +GM D R V++
Sbjct: 29 KNGQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVE--QISKHIGCVYSGMGPDFRILVKK 85
Query: 365 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG-PCVY 541
AR A ++ YG E+P L IA + Q YTQ+ +RP G S+++ +D G P ++
Sbjct: 86 ARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLF 145
Query: 542 KTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKS 721
+ DPSG Y ++KA A G V+ +LEK+ + +L DD I A+ L + V
Sbjct: 146 QCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALEL--DDGIHTALLTLRESFDVGMNE 203
Query: 722 SXI 730
+ +
Sbjct: 204 NNV 206
Score = 34.3 bits (75), Expect = 0.090
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 121 ITIFSPEGRLYQVEYALKAINQG 189
+T FSP G+L Q+EYAL A+ G
Sbjct: 9 LTTFSPSGKLMQIEYALNAVKNG 31
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 98.7 bits (235), Expect = 4e-21
Identities = 51/171 (29%), Positives = 88/171 (51%)
Frame = +2
Query: 191 GLTSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQRAR 370
G T+V +RG D V+ ++K L D ++ + + D + G+ AD+R V RAR
Sbjct: 30 GSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRAR 89
Query: 371 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTD 550
E +++ + V + R IA+ Q +TQ+ RP G SM++ +D + P ++KT+
Sbjct: 90 IECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTE 149
Query: 551 PSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVL 703
PSG Y Y A A G YLE++ + + + ++L + L+QV+
Sbjct: 150 PSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVV 200
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 109 FDRHITIFSPEGRLYQVEYALKAINQG 189
+DR ITIFSP+G L+QVEYA +A+ +G
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKG 30
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 82.2 bits (194), Expect = 3e-16
Identities = 51/184 (27%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Frame = +2
Query: 191 GLTSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQRAR 370
G TS+ ++ ++ ++AA+++ +L+ ++ + + IG G+IADSR+ V+RA+
Sbjct: 34 GSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQ 93
Query: 371 YEAANWQYKYGSEIPVHILCRRIADISQVYTQN---AEM-RPLGCSMMLIAYDDEAGPCV 538
EA N+ + Y +I V + + +A+++ + + A M RP G +M+ D E G +
Sbjct: 94 IEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQE-GAKL 152
Query: 539 YKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFK 718
+ DPSG + KA + GA + DG A K + L+ + +++A++ L QV+
Sbjct: 153 FHLDPSGTFIDCKAKSIGAAS-DG-AEQNLKEQYHDALTIKEGLKMALAILKQVMEEKLN 210
Query: 719 SSXI 730
S+ +
Sbjct: 211 SANV 214
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 109 FDRHITIFSPEGRLYQVEYALKAINQGWVDI 201
+DR + FSPEGRL+QVEYA++A+ G I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSI 38
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/144 (25%), Positives = 64/144 (44%)
Frame = +2
Query: 197 TSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQRARYE 376
T +A+RG + VV A + + +L + +F + D +G + G D + A E
Sbjct: 36 TMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGE 95
Query: 377 AANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPS 556
A W Y +P+ + +A+ ++T RP G ++++ + G ++ +PS
Sbjct: 96 AMKWLKDYREPMPIQNIANSVAEYIHIHTLGIS-RPFGAGAFFMSWNKQTGGRLFLVEPS 154
Query: 557 GYYCSYKAVAAGAKTVDGNAYLEK 628
G YKA A G A +EK
Sbjct: 155 GLNYEYKAWAVGKHRQAAKAEIEK 178
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 106 GFDRHITIFSPEGRLYQVEYALKAIN 183
G+D + FSP+GR++QVEYA KA++
Sbjct: 7 GYDLAASTFSPDGRIFQVEYAQKAVD 32
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/174 (21%), Positives = 77/174 (44%)
Frame = +2
Query: 191 GLTSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQRAR 370
G +V ++ AV+ A ++ + L + ++ + G + G+++D R + +
Sbjct: 32 GSATVGIKSETHAVIVALKRAQNDL--SSHQKKVYEIDTHAGVSIAGLLSDGRILARYLQ 89
Query: 371 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTD 550
E ++W++ Y +P+ L + Q TQ RP G +++ YD + G + +TD
Sbjct: 90 TECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKD-GAHIIQTD 148
Query: 551 PSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVD 712
PS S + GA++ YLE+ + + + I A+ L L +
Sbjct: 149 PSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAE 202
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/27 (55%), Positives = 24/27 (88%)
Frame = +1
Query: 109 FDRHITIFSPEGRLYQVEYALKAINQG 189
+D +T++SP+GRL+QVEYA++A+ QG
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQG 32
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/88 (17%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 191 GLTSVALRGTDAAVVAAQRKVPDRLLDPAS-VTHLFALTDRIGCVMTGMIADSRSQVQRA 367
G T VA+ G + +A+ ++ +++ A+ + +TD++ + G +D+R+ +++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 368 RYEAANWQYKYGSEIPVHILCRRIADIS 451
+ ++ + I +L I++++
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLA 95
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +1
Query: 352 SSTTSSL*GC--QLAVQVWVRDT--CAYLMQTHS*YLSSLHPKCRDET 483
++ +SSL C +V+VW +T CA +TH+ +++++HP R T
Sbjct: 90 TTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVT 137
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 619 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 530
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 619 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 530
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 619 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 530
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 619 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 530
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,856,345
Number of Sequences: 27780
Number of extensions: 312806
Number of successful extensions: 772
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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