Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L14
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0127 - 977667-978719,978875-979051                               29   3.8  
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906...    29   5.1  
07_01_0230 - 1679165-1681108                                           28   6.7  
01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565...    28   6.7  

>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 449 CTKAFPFRKFCLAEIRCKMGWRYCN 523
           C +  P+R+ CLA  +C+ G  Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154


>02_03_0313 -
           17590109-17590148,17590254-17590382,17590479-17590612,
           17590779-17590841,17590920-17591070,17593372-17593424,
           17593483-17593629,17593839-17594163,17594240-17594409,
           17595252-17595453,17596065-17596273,17597051-17597260,
           17597360-17597489,17599664-17600402,17600411-17600531
          Length = 940

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 564 KALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 668
           K + Q + P E+  R LH C C    +  D  D +
Sbjct: 293 KGMRQMYEPFENLARELHMCPCCQRAFTPDEEDEF 327


>07_01_0230 - 1679165-1681108
          Length = 647

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 279 SPVPLIHVFCQYEMQVRSNRRPASN-LHQSPEILL 178
           SP+  ++ F  + ++V   RRP +N  H SP IL+
Sbjct: 506 SPLTDVYAFAIFVLEVTCGRRPINNYTHDSPTILV 540


>01_05_0251 +
           19952882-19955459,19956209-19956245,19956370-19956586,
           19957063-19957221,19957397-19957516,19957609-19957719
          Length = 1073

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 710 VCAWIAIQYFGYGVIIVTVVN 648
           +C W  + +  YGV++V  VN
Sbjct: 901 ICLWYGLPFVSYGVVLVATVN 921


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,925,721
Number of Sequences: 37544
Number of extensions: 345113
Number of successful extensions: 1088
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)