Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_L14
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein. 32 1.9
AK126023-1|BAC86397.1| 1315|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens ... 32 1.9
AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protei... 32 2.5
AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protei... 32 2.5
AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protei... 32 2.5
AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protei... 32 2.5
AK091431-1|BAC03664.1| 992|Homo sapiens protein ( Homo sapiens ... 32 2.5
AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein. 32 2.5
AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein. 32 2.5
BC142619-1|AAI42620.1| 772|Homo sapiens LAMB4 protein protein. 31 3.2
AF172277-3|AAF22284.1| 761|Homo sapiens laminin beta 1 related ... 31 3.2
AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain pr... 31 3.2
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 4.3
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 4.3
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot... 30 7.5
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot... 30 7.5
>BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein.
Length = 1699
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 477 FVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDN 656
FV+ D++ + + + + +WK+ KALLQKF+P +G+ T Y G+ D
Sbjct: 1360 FVVKIEDIETFKEALKTGKEPPAIWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDA 1418
Query: 657 RDNYYPI-TEILDRNPRTDSKEIC 725
+ Y I + ++ + + +C
Sbjct: 1419 KSKYKRIYVKFIENANKKEYVRVC 1442
>AK126023-1|BAC86397.1| 1315|Homo sapiens protein ( Homo sapiens cDNA
FLJ44035 fis, clone TESTI4028612. ).
Length = 1315
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 477 FVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDN 656
FV+ D++ + + + + +WK+ KALLQKF+P +G+ T Y G+ D
Sbjct: 1121 FVVKIEDIETFKEALKTGKEPPAIWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDA 1179
Query: 657 RDNYYPI-TEILDRNPRTDSKEIC 725
+ Y I + ++ + + +C
Sbjct: 1180 KSKYKRIYVKFIENANKKEYVRVC 1203
>AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21924 fis, clone HEP04086. ).
Length = 724
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 477 FVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDN 656
FV+ D++ + + + + +WK+ KALLQKF+P +G+ T Y G+ D
Sbjct: 325 FVVKIEDIETFKEALKTGKEPPAIWKVQ-KALLQKFVPEIRDGQREFAATNSYLGYFGDA 383
Query: 657 RDNYYPI-TEILDRNPRTDSKEIC 725
+ Y I + ++ + + +C
Sbjct: 384 KSKYKRIYVKFIENANKKEYVRVC 407
>AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protein
splice variant 3 protein.
Length = 863
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 662
Query: 666 YYPI 677
P+
Sbjct: 663 LLPV 666
>AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protein
splice variant 2 protein.
Length = 1427
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 662
Query: 666 YYPI 677
P+
Sbjct: 663 LLPV 666
>AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protein
splice variant 1 protein.
Length = 3997
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 662
Query: 666 YYPI 677
P+
Sbjct: 663 LLPV 666
>AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protein
protein.
Length = 4022
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 662
Query: 666 YYPI 677
P+
Sbjct: 663 LLPV 666
>AK091431-1|BAC03664.1| 992|Homo sapiens protein ( Homo sapiens
cDNA FLJ34112 fis, clone FCBBF3008870. ).
Length = 992
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 83 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 133
Query: 666 YYPI 677
P+
Sbjct: 134 LLPV 137
>AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.
Length = 3997
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 612 LKSDIKDENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 662
Query: 666 YYPI 677
P+
Sbjct: 663 LLPV 666
>AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.
Length = 4022
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 486 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDN 665
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S + D+
Sbjct: 612 LKSDIKDENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAEFNLLDH 662
Query: 666 YYPI 677
P+
Sbjct: 663 LLPV 666
>BC142619-1|AAI42620.1| 772|Homo sapiens LAMB4 protein protein.
Length = 772
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 678 LWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLC 562
L G C CQH+T+ H C LF+ PL IS C
Sbjct: 354 LSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYAC 392
>AF172277-3|AAF22284.1| 761|Homo sapiens laminin beta 1 related
protein protein.
Length = 761
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 678 LWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLC 562
L G C CQH+T+ H C LF+ PL IS C
Sbjct: 342 LSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYAC 380
>AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 1761
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 678 LWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLC 562
L G C CQH+T+ H C LF+ PL IS C
Sbjct: 354 LSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYAC 392
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 546 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 722
+W++ KALLQKF P +G+ T Y G+ D ++ Y + + L+ + D +
Sbjct: 239 IWRVQ-KALLQKFTPEIKDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRV 297
Query: 723 C 725
C
Sbjct: 298 C 298
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 546 LWKIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNYYPI-TEILDRNPRTDSKEI 722
+W++ KALLQKF P +G+ T Y G+ D ++ Y + + L+ + D +
Sbjct: 784 IWRVQ-KALLQKFTPEIKDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRV 842
Query: 723 C 725
C
Sbjct: 843 C 843
>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain
protein.
Length = 1798
Score = 30.3 bits (65), Expect = 7.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 672 GNNCHGCQHSTQNTHMYICVKLFHLIP 592
G C GCQH+T H +C F+ P
Sbjct: 371 GGVCDGCQHNTAGRHCELCRPFFYRDP 397
>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain
protein.
Length = 1798
Score = 30.3 bits (65), Expect = 7.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 672 GNNCHGCQHSTQNTHMYICVKLFHLIP 592
G C GCQH+T H +C F+ P
Sbjct: 371 GGVCDGCQHNTAGRHCELCRPFFYRDP 397
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,569,923
Number of Sequences: 237096
Number of extensions: 1962815
Number of successful extensions: 4374
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4374
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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