Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L14
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060466-1|AAL25505.1|  626|Drosophila melanogaster SD04853p pro...    51   2e-06
AE014296-3304|AAN11624.1|  981|Drosophila melanogaster CG17233-P...    51   2e-06
AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-P...    51   2e-06
AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-P...    51   2e-06
AY061487-1|AAL29035.1|  749|Drosophila melanogaster LD45152p pro...    29   6.6  
AE014134-540|AAF51159.2|  749|Drosophila melanogaster CG3605-PA ...    29   6.6  
AY075532-1|AAL68339.1|  844|Drosophila melanogaster RH06639p pro...    29   8.7  
AE014134-2430|ABC65898.1|  844|Drosophila melanogaster CG17988-P...    29   8.7  

>AY060466-1|AAL25505.1|  626|Drosophila melanogaster SD04853p
           protein.
          Length = 626

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/84 (29%), Positives = 45/84 (53%)
 Frame = +3

Query: 417 GNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPME 596
           G  S SS      ++F +G+F++L+SD+  D  T+         W++D K +LQK+ P  
Sbjct: 299 GYASASSGPAANSENFKTGDFIVLRSDLVNDWPTI---------WQVDSKCILQKYEPFR 349

Query: 597 SNGRVLHKCTCVYSGWNVDNRDNY 668
            NG+  ++    Y+ WN++ +  Y
Sbjct: 350 QNGKTFYRNMSKYASWNLETKKLY 373


>AE014296-3304|AAN11624.1|  981|Drosophila melanogaster CG17233-PB,
           isoform B protein.
          Length = 981

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/84 (29%), Positives = 45/84 (53%)
 Frame = +3

Query: 417 GNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPME 596
           G  S SS      ++F +G+F++L+SD+  D  T+         W++D K +LQK+ P  
Sbjct: 654 GYASASSGPAANSENFKTGDFIVLRSDLVNDWPTI---------WQVDSKCILQKYEPFR 704

Query: 597 SNGRVLHKCTCVYSGWNVDNRDNY 668
            NG+  ++    Y+ WN++ +  Y
Sbjct: 705 QNGKTFYRNMSKYASWNLETKKLY 728


>AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-PC,
            isoform C protein.
          Length = 1465

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/84 (29%), Positives = 45/84 (53%)
 Frame = +3

Query: 417  GNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPME 596
            G  S SS      ++F +G+F++L+SD+  D  T+         W++D K +LQK+ P  
Sbjct: 1138 GYASASSGPAANSENFKTGDFIVLRSDLVNDWPTI---------WQVDSKCILQKYEPFR 1188

Query: 597  SNGRVLHKCTCVYSGWNVDNRDNY 668
             NG+  ++    Y+ WN++ +  Y
Sbjct: 1189 QNGKTFYRNMSKYASWNLETKKLY 1212


>AE014296-3302|AAN11623.1| 1173|Drosophila melanogaster CG17233-PA,
            isoform A protein.
          Length = 1173

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 25/84 (29%), Positives = 45/84 (53%)
 Frame = +3

Query: 417  GNKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPME 596
            G  S SS      ++F +G+F++L+SD+  D  T+         W++D K +LQK+ P  
Sbjct: 846  GYASASSGPAANSENFKTGDFIVLRSDLVNDWPTI---------WQVDSKCILQKYEPFR 896

Query: 597  SNGRVLHKCTCVYSGWNVDNRDNY 668
             NG+  ++    Y+ WN++ +  Y
Sbjct: 897  QNGKTFYRNMSKYASWNLETKKLY 920


>AY061487-1|AAL29035.1|  749|Drosophila melanogaster LD45152p
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +3

Query: 192 DSGEDWTPDADS--NEPAS-RTGRKRVSKAPVNNTKKKRK 302
           D GED   DAD+  N  AS +TG++  SKA  N  KKKRK
Sbjct: 101 DVGEDSEEDADNQVNGSASQKTGKQ--SKAERNKKKKKRK 138


>AE014134-540|AAF51159.2|  749|Drosophila melanogaster CG3605-PA
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +3

Query: 192 DSGEDWTPDADS--NEPAS-RTGRKRVSKAPVNNTKKKRK 302
           D GED   DAD+  N  AS +TG++  SKA  N  KKKRK
Sbjct: 101 DVGEDSEEDADNQVNGSASQKTGKQ--SKAERNKKKKKRK 138


>AY075532-1|AAL68339.1|  844|Drosophila melanogaster RH06639p
           protein.
          Length = 844

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 552 KIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVD 653
           ++DG AL + F P+E   R  +  T  Y GWN D
Sbjct: 763 RLDGTALREYFAPLEEWLRQENLRTNEYVGWNYD 796


>AE014134-2430|ABC65898.1|  844|Drosophila melanogaster CG17988-PB
           protein.
          Length = 844

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 552 KIDGKALLQKFIPMESNGRVLHKCTCVYSGWNVD 653
           ++DG AL + F P+E   R  +  T  Y GWN D
Sbjct: 763 RLDGTALREYFAPLEEWLRQENLRTNEYVGWNYD 796


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,142,475
Number of Sequences: 53049
Number of extensions: 593531
Number of successful extensions: 1665
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)