Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_L03
(707 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 229 2e-60
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 227 9e-60
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 215 3e-56
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 107 9e-24
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 101 6e-22
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 100 1e-21
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 100 1e-21
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 100 2e-21
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 96 3e-20
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 52 6e-07
10_04_0016 + 7601796-7601999,7602495-7602543,7603140-7603165,760... 34 0.13
04_04_1419 - 33433463-33436009 29 3.6
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 29 4.8
10_01_0150 + 1747424-1747758,1748097-1748103 28 8.4
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 229 bits (559), Expect = 2e-60
Identities = 109/212 (51%), Positives = 142/212 (66%)
Frame = +3
Query: 66 GGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFET 245
G V FIAE+ Q GG + GY K Y+ V +AGGVCIADEVQ GFGR G+H W F+T
Sbjct: 259 GRVAGFIAETFQGVGGAVELAPGYLKLAYDTVRKAGGVCIADEVQSGFGRTGSHYWGFQT 318
Query: 246 QDVVPDIVTMGKPMGNGHPVAAVITTPEIAKSFSDTGVEYFNTYGGNPVSCAIANAVLDV 425
QDV+PDIVTM K +GNG P+ AV+TTPEIA + FNT+GGNPV AVL V
Sbjct: 319 QDVIPDIVTMAKGIGNGLPLGAVVTTPEIANVLAQK--IQFNTFGGNPVCSVGGLAVLKV 376
Query: 426 IEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETXTPATAEAK 605
+++E + VG+HL++R ++L+ KH ++GDVRGRGL +GVELVTDR+ TPA AE
Sbjct: 377 LDKEKRQAHCADVGSHLVNRLKELQQKHEIIGDVRGRGLMLGVELVTDRKEKTPAKAETN 436
Query: 606 HVVNXMREXNILIXRDGPDSNVLKFXPPMVFT 701
+ +++ NIL+ + G NV + PPM FT
Sbjct: 437 LLFEKLKDLNILVGKGGLHGNVFRIKPPMCFT 468
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 227 bits (554), Expect = 9e-60
Identities = 109/214 (50%), Positives = 142/214 (66%)
Frame = +3
Query: 66 GGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFET 245
G V FI+E++Q GG + GY VY V +AGG+CIADEVQ G R G+H W FE+
Sbjct: 257 GRVGGFISEAIQGVGGIVELAPGYLPAVYNMVRKAGGLCIADEVQAGVARTGSHFWGFES 316
Query: 246 QDVVPDIVTMGKPMGNGHPVAAVITTPEIAKSFSDTGVEYFNTYGGNPVSCAIANAVLDV 425
V+PDIVTM K +GNG P+ AV+TTPEIA+ T YFNT+GGNPVS A +AVL V
Sbjct: 317 HGVIPDIVTMAKGIGNGIPIGAVVTTPEIAQVL--TRRSYFNTFGGNPVSTAGGHAVLKV 374
Query: 426 IEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETXTPATAEAK 605
+E+E L E A VG++L R LK KH ++GDVRG+G +GVELVTDR+ TPA E
Sbjct: 375 LEKEKLQENAFVVGSYLKERLNKLKEKHDIIGDVRGKGFLLGVELVTDRQKKTPAKVEIG 434
Query: 606 HVVNXMREXNILIXRDGPDSNVLKFXPPMVFTTQ 707
HV+N M++ +L+ + G NV + PP+ FT +
Sbjct: 435 HVMNHMKDMGVLVGKGGFYGNVFRVTPPLCFTKE 468
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 215 bits (525), Expect = 3e-56
Identities = 107/214 (50%), Positives = 136/214 (63%)
Frame = +3
Query: 66 GGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFET 245
G V FI+E++Q GG + GY YE V AGG+CIADEVQ GF RVG+H W FET
Sbjct: 235 GQVAGFISEAIQGVGGIVELSPGYLPLAYEAVRSAGGLCIADEVQAGFARVGSHFWGFET 294
Query: 246 QDVVPDIVTMGKPMGNGHPVAAVITTPEIAKSFSDTGVEYFNTYGGNPVSCAIANAVLDV 425
VVPDIVTM K +GNG P+ AV+TTPEIA+ T YFNT+GGNP+ A AVL V
Sbjct: 295 HGVVPDIVTMAKGIGNGIPLGAVVTTPEIAQVL--TRRCYFNTFGGNPLCTAGGLAVLRV 352
Query: 426 IEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETXTPATAEAK 605
+E+E L A VG++L R L+ KH ++GDVRG G +GVELVTDR+ TPA E
Sbjct: 353 LEKEGLQANAHAVGSYLKDRLRALQDKHEIIGDVRGTGFMLGVELVTDRQLKTPAKDEIC 412
Query: 606 HVVNXMREXNILIXRDGPDSNVLKFXPPMVFTTQ 707
+ M+E +L+ + G NV + PP+ FT +
Sbjct: 413 RAMEHMKEMGVLVGKGGFYGNVFRITPPLCFTKE 446
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 107 bits (257), Expect = 9e-24
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 8/218 (3%)
Frame = +3
Query: 72 VCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFETQD 251
+ AFIAE + GG I PP YF+++ + + + IADEV FGR+GT M+ + D
Sbjct: 311 IAAFIAEPVMGAGGVIPPPKTYFEKIQAVLKKYDILLIADEVITAFGRLGT-MFGCDMYD 369
Query: 252 VVPDIVTMGKPMGNGH-PVAAVITTPEI-----AKSFSDTGVEYFNTYGGNPVSCAIANA 413
+ PD+V++ K + + + P+ A++ +PEI ++S + TY G+PVSCA+A
Sbjct: 370 IKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIE 429
Query: 414 VLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETXTPAT 593
L + +E N++E ++ + +VG++RG GL +G E V ++ P
Sbjct: 430 ALKIYKERNIIEHVQKIAPRFQEGIKAFSGS-PIVGEIRGLGLILGTEFVDNKSPNDPFP 488
Query: 594 AE--AKHVVNXMREXNILIXRDGPDSNVLKFXPPMVFT 701
AE + E ++ R D+ +L PP++ T
Sbjct: 489 AEWGVGSLFGAECEKRGMLIRVAGDNIMLS--PPLIMT 524
>04_04_1143 + 31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 101 bits (242), Expect = 6e-22
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
Frame = +3
Query: 60 KXGGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAF 239
K + AFIAE + GG I PP YF++V V + + IADEV FGR+GT M+
Sbjct: 712 KRSKIAAFIAEPVMGAGGVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLGT-MFGS 770
Query: 240 ETQDVVPDIVTMGKPMGNGH-PVAAVITTPEI-----AKSFSDTGVEYFNTYGGNPVSCA 401
+ ++ PD+V+M K + + + P+ A++ +PEI ++S + TY G+PV+CA
Sbjct: 771 DMYNIKPDLVSMAKALSSAYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACA 830
Query: 402 IANAVLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETX 581
+A L + +E N+ + ++ + +VG++RG GL +G E ++
Sbjct: 831 VAIEALKIYQERNIPDHVKQISPRFQEGVKAFAGS-PIVGEIRGVGLILGTEFADNKSPN 889
Query: 582 TPATAE 599
P AE
Sbjct: 890 DPFPAE 895
Score = 95.1 bits (226), Expect = 5e-20
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Frame = +3
Query: 72 VCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFETQD 251
V AFIAE + GG I PP YF+++ + + + IADEV GFGR+GT M+ + +
Sbjct: 225 VAAFIAEPVIGAGGVIPPPKTYFEKIQAVLQKYDVLFIADEVITGFGRLGT-MFGSDLYN 283
Query: 252 VVPDIVTMGKPMGNGH-PVAAVITTPEIAK--SFSDTGVEYFN---TYGGNPVSCAIANA 413
+ PD+V++ K + + + P+ A + +PEI+ + +F TY G+PVSCA+A
Sbjct: 284 IKPDLVSLAKALSSAYVPIGATLVSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALE 343
Query: 414 VLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETXTPAT 593
L + E N+ ++ + ++G+ RG GL + E ++ P
Sbjct: 344 ALKIYRERNIPAHVKQISPRFQEGIKAFAGS-SIIGETRGVGLLLATEFANNKSPNDPFP 402
Query: 594 AE 599
E
Sbjct: 403 VE 404
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 100 bits (240), Expect = 1e-21
Identities = 53/165 (32%), Positives = 86/165 (52%)
Frame = +3
Query: 66 GGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFET 245
G + A E +Q GG + + + + EAG + + DEVQ G GR G ++WA+E
Sbjct: 256 GKIAAVFVEPMQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWAYEA 314
Query: 246 QDVVPDIVTMGKPMGNGHPVAAVITTPEIAKSFSDTGVEYFNTYGGNPVSCAIANAVLDV 425
VVPDI+T+ KP+ G P+ V+ T ++A + + ++ T+GG P+ C A LD
Sbjct: 315 YGVVPDIMTLAKPLAGGLPIGVVLVTEKVASAINYG--DHGTTFGGGPLVCQAALTTLDK 372
Query: 426 IEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVEL 560
I++ L ++ G + + V ++RG GL VG+EL
Sbjct: 373 IQKPGFLAEVAKKGENFKQLLSTKLSGNAHVKEIRGIGLIVGIEL 417
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 100 bits (240), Expect = 1e-21
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Frame = +3
Query: 66 GGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFET 245
G + A E +Q GG + + + + EAG + + DEVQ G GR G ++WA+E
Sbjct: 245 GKIAAVFVEPVQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWAYEA 303
Query: 246 QDVVPDIVTMGKPMGNGHPVAAVITTPEIAK--SFSDTGVEYFNTYGGNPVSCAIANAVL 419
V+PDI+T+ KP+ G P+ V+ T ++A +F D G T+GG P+ C A L
Sbjct: 304 YGVLPDIMTLAKPLAGGLPIGVVLVTEKVASAINFGDHG----TTFGGGPLVCQAALTTL 359
Query: 420 DVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETXTPATAE 599
D I++ L ++ G + + V ++RG GL VG+EL
Sbjct: 360 DKIQKPGFLAEVAKKGENFKQLLSTKLSGNAHVKEIRGIGLIVGIEL----------DVP 409
Query: 600 AKHVVNXMREXNILIXRDGPDSNVLKFXPPMVFT 701
A +V+ + +++ G NV++ PP++ +
Sbjct: 410 AGPLVDACLDRGVIVLTAG-KGNVVRLVPPLIIS 442
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 99.5 bits (237), Expect = 2e-21
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Frame = +3
Query: 72 VCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFETQD 251
+C F+ E +Q G IIPPDGY K V + + IADE+Q G R G M A + ++
Sbjct: 225 ICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTG-KMLACDWEN 283
Query: 252 VVPDIVTMGKPMGNG-HPVAAVITTPEIAKSFSDTGVEYFNTYGGNPVSCAIANAVLDVI 428
+ PD+V +GK +G G PV+AV+ +I E+ +T+GGNP++ A+A A L V+
Sbjct: 284 IRPDVVILGKALGAGVVPVSAVLADKDIMLCIKPG--EHGSTFGGNPLASAVAVASLKVV 341
Query: 429 EEENLLE-----------------RASRVGNHLLSRCEDLKHKH-RLVGDVRGRGLFVGV 554
+E L+E RA+++G + + ++ + +++ +VRGRGL V
Sbjct: 342 TDEGLVESCMIVYEYLSSKHLLNYRAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAV 401
Query: 555 ELVTDRETXTPATA 596
+L E +PA+A
Sbjct: 402 DL--SNEALSPASA 413
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 95.9 bits (228), Expect = 3e-20
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Frame = +3
Query: 72 VCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFETQD 251
+ AFIAE + GG I+PP YF+++ V + + I DEV GFGR+GT M+ + +
Sbjct: 162 IAAFIAEPVIGAGGVILPPKTYFEKIQAVVKKYDILFIVDEVITGFGRLGT-MFGSDLYN 220
Query: 252 VVPDIVTMGKPMGNGH-PVAAVITTPEIA---KSFSDTGVEYFN--TYGGNPVSCAIANA 413
+ PD+V++ K + + + P+ A++ +PEI+ S S+ + + TY G+PVSCA+A
Sbjct: 221 IKPDLVSLAKALSSAYAPIGAILVSPEISDVIHSHSNKLGTFAHGFTYSGHPVSCAVALE 280
Query: 414 VLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDR 572
L + E ++ + V + +VG+ RG GL + E ++
Sbjct: 281 ALKIYRERDIPGHVTHVAQRFQEGIKAFAAGSPIVGETRGVGLLIATEFTDNK 333
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 51.6 bits (118), Expect = 6e-07
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
Frame = +3
Query: 66 GGVCAFIAESLQSCGGQIIPPDGYFKRVYEYVHEAGGVCIADEVQVGFGRVGTHMWAFET 245
G + A E + G I P G+ + + + G + + DEV GF R+ + A E
Sbjct: 249 GQIAAVFLEPVVGNAGFIPPQPGFLNALRDLTKQDGALLVFDEVMTGF-RLA-YGGAQEY 306
Query: 246 QDVVPDIVTMGKPMGNGHPVAAVITTPEIAKSFSDTGVEY-FNTYGGNPVSCAIANAVLD 422
+ PD+ T+GK +G G PV A +I + + G Y T GNP++ L
Sbjct: 307 FGITPDVSTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 366
Query: 423 VIEEENLLERASRVGNHLLSRCED--LKHKHRLVGDVRGRGLF 545
+ E + ++ L+ D K H + G RG+F
Sbjct: 367 RLMEPGTYDYLDKITGDLVRGVLDAGAKTGHEMCGG-HIRGMF 408
>10_04_0016 +
7601796-7601999,7602495-7602543,7603140-7603165,
7603334-7603339,7603496-7603570,7603880-7603933
Length = 137
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 72 VCAFIAESLQSCGGQIIPPDGYFKRVYEY 158
+ AFIAE + GG I PP YF++V Y
Sbjct: 96 IAAFIAEPVMGAGGVIAPPKTYFEKVSPY 124
>04_04_1419 - 33433463-33436009
Length = 848
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 74 LCFHSGESTELWGTD--YTSGRIFQTCIRIC 160
+ F T+ WG D YT+G F TC R+C
Sbjct: 339 VAFAEMRHTDYWGFDLNYTAGISFDTCRRLC 369
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 193 SSAIHTPPASCTYSYTRLKYPSGGIICPPQL-CRLSAMKAQTPP 65
+S + +PP +C RL P+ + PP+L RL ++A + P
Sbjct: 4 ASLVSSPPLACCLQLHRLLRPAALLPSPPRLRLRLRPLRADSSP 47
>10_01_0150 + 1747424-1747758,1748097-1748103
Length = 113
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 130 SGGIICPPQLCRLSAMKAQTPPXLXL 53
+G + CPP RL+A A+ PP L
Sbjct: 70 AGAVACPPTSPRLTAASARAPPRTCL 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,720,467
Number of Sequences: 37544
Number of extensions: 485251
Number of successful extensions: 1189
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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