Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L02
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   9.1  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 439 LWILIGAFVAAVVGVLY 389
           LW+L    VA  VGVLY
Sbjct: 31  LWVLFVIIVAGNVGVLY 47


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 662 RSISRTL-DAADVVGNFVYCSCFYPNR 585
           RSI+ T  +  D++GN +  S   PNR
Sbjct: 330 RSITLTENEGIDILGNMIESSILSPNR 356


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 748 KSRGAFLPEHVCKR 707
           K+ G F+PEH+ +R
Sbjct: 651 KAEGKFVPEHIDQR 664



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = +2

Query: 365  TTCDDAIFIQYPNDC-RY 415
            + C +  F  YP DC RY
Sbjct: 1277 SACSENAFAAYPGDCTRY 1294


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 668 NQRSISRT-LDAADVVGNFVYCSCFYPNR 585
           N ++I  T  +  DV+GN +  S   PNR
Sbjct: 328 NGQNIPLTEFEGIDVLGNIIESSILSPNR 356


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 356 VHQTTCDDAIFIQYPNDCRYEGADQNPQATRRPTP 460
           +HQT    +  I  P     E   Q P +T+ P P
Sbjct: 378 IHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAP 412


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 790 IKVPSLGPYLVTNLKSRGAFLPE 722
           +  PS+ P  + ++   G FLP+
Sbjct: 191 VNAPSVSPASLPSISPSGGFLPK 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,481
Number of Sequences: 336
Number of extensions: 3942
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)