Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L02
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0907 - 7636725-7637681                                           29   4.5  
04_03_0558 + 17111138-17111996,17112474-17112564,17112647-171132...    29   6.0  
10_08_0199 + 15721585-15722109,15722135-15722740,15723084-157232...    28   7.9  

>07_01_0907 - 7636725-7637681
          Length = 318

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 555 TGGGRDSSAKPIRIKTRT-INEIPHDISCIKCPR 653
           +GGG  SSA+P+ +  R  + +IP     +KCPR
Sbjct: 10  SGGGGASSARPVSMAERARMAKIPQPEPGLKCPR 43


>04_03_0558 +
           17111138-17111996,17112474-17112564,17112647-17113268,
           17113378-17113457,17113871-17113937,17114138-17114263,
           17114333-17114415,17115334-17115777,17115834-17115927,
           17116038-17116124,17116474-17116594,17116671-17116709,
           17116828-17116997
          Length = 960

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 316 AIVESMIMTLVAVGSPDNMRRCNFYTIPQRLPLRRRRS 429
           ++V S++ T +     DN+    F TI  R PL+ RR+
Sbjct: 297 SVVTSVVGTFLTQNVSDNLSSNAFMTIAARFPLKNRRN 334


>10_08_0199 +
           15721585-15722109,15722135-15722740,15723084-15723273,
           15723907-15724175
          Length = 529

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 430 LIGAFVAAVVGVLYKNCIVAC 368
           L+G F A VVG+L   CI+ C
Sbjct: 151 LLGVFPAMVVGILANTCILLC 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,721,602
Number of Sequences: 37544
Number of extensions: 401929
Number of successful extensions: 906
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)