BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_L02
(832 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 26 1.6
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 25 2.8
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 25.8 bits (54), Expect = 1.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 180 LLFIGTLGARQPDIDINRIKLLPKEDFRHRTSFSFQTRRSVLDIDRYRRKYDHDVGSR 353
LL GT+ + + +I L E+ + + + R V+D R K+ H+ GS+
Sbjct: 162 LLLNGTVMLDMEAVSLEQIAELVCENMVNSGTLPVEARDKVIDALLKRHKHQHEFGSK 219
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 25.0 bits (52), Expect = 2.8
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 709 RGGCNITXLTPTLAINVLSRGHL 641
RGGC++ TP ++ + RG++
Sbjct: 297 RGGCHVLVATPGRLLDFIDRGYV 319
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,380
Number of Sequences: 2352
Number of extensions: 16388
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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