Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_L02
         (832 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    25   1.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   6.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.0  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 307 ISIAIVESMIMTLVAVGSPDNMRRCNFYTIPQR 405
           I   ++ +M+M  +AV  P+N R C+  ++PQ+
Sbjct: 7   IRFFVLTTMLMMAIAVELPNNWRICD-RSLPQK 38


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 164 TCYSHSFIYWNSWSPSAGHRHQQ 232
           T + +  + WNSW PS     QQ
Sbjct: 464 TMHPYDHLVWNSWMPSIRGAIQQ 486


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 696 LQPPRLQTCSGRKAPRDFKFVTKYGPKLGTLIXSGVY 806
           L+PPR+   SG K+P   + +T      GTL  S +Y
Sbjct: 630 LEPPRVILSSGAKSPTVLEELTH-----GTLAASTLY 661


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 696 LQPPRLQTCSGRKAPRDFKFVTKYGPKLGTLIXSGVY 806
           L+PPR+   SG K+P   + +T      GTL  S +Y
Sbjct: 630 LEPPRVILSSGAKSPTVLEELTH-----GTLAASTLY 661


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 696 LQPPRLQTCSGRKAPRDFKFVTKYGPKLGTLIXSGVY 806
           L+PPR+   SG K+P   + +T      GTL  S +Y
Sbjct: 630 LEPPRVILSSGAKSPTVLEELTH-----GTLAASTLY 661


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 388 YTIPQRLPLRRRRSKSTSHEKTHASSINLI 477
           YT    L   RRRSK +  +K   SSI  +
Sbjct: 222 YTYTSILLEIRRRSKKSEDDKIRRSSIGFL 251


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 739 LEILNSLPSTDLSLVL 786
           +EILNSL +T LS ++
Sbjct: 512 IEILNSLSATKLSKII 527


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 739 LEILNSLPSTDLSLVL 786
           +EILNSL +T LS ++
Sbjct: 550 IEILNSLSATKLSKII 565


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,049
Number of Sequences: 438
Number of extensions: 4679
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)