Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K23
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 41 2e-04
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 37 0.003
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 37 0.003
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.005
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.019
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.026
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.026
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 33 0.026
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 33 0.034
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 32 0.059
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.14
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 31 0.18
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 31 0.18
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 30 0.24
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 30 0.24
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 30 0.24
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.55
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.55
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.55
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 28 0.97
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 28 1.3
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 27 1.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 1.7
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 27 1.7
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.2
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 3.0
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 27 3.0
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 27 3.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 3.9
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 26 3.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 3.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 5.2
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 26 5.2
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 6.8
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 6.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 6.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 6.8
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 25 9.0
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 25 9.0
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.0
SPBC2A9.08c |sec22||SNARE Sec22|Schizosaccharomyces pombe|chr 2|... 25 9.0
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.0
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 25 9.0
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 25 9.0
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 40.7 bits (91), Expect = 2e-04
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Frame = +1
Query: 85 QKAATMDAIKKKMQAMKLE-KDNAMDKADTCEQQARDANLRAEKVNEE--VRELQKKLAQ 255
Q+ A +A +K + +LE ++NA +A+ EQ R+A +A++ EE RE ++K A+
Sbjct: 538 QEKAEAEAKRKAEEKARLEAEENAKREAE--EQAKREAEEKAKREAEEKAKREAEEK-AK 594
Query: 256 VEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQK 435
E + + E+A + EEK K+ +A+ A K ++
Sbjct: 595 REAEENAKREAEEKAKREAEEKAKREAEEKAKREA-EEKAKREAEEKAKREAEEKAKREA 653
Query: 436 LLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFV 615
+A++ A+EN + + E +A+++ E + + K R E+A K++E ++ A
Sbjct: 654 EEKAKREAEENAK--REAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADK 711
Query: 616 EDEL 627
E+
Sbjct: 712 NPEI 715
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 36.7 bits (81), Expect = 0.003
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Frame = +1
Query: 145 DNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKE 324
D +K + + +A RAE +++E++ +L+ E++ K E A LEE E
Sbjct: 2 DKLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE 61
Query: 325 ---KQL-------TATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSADENNR 474
KQL + E L+RKV +K+ + A+ R
Sbjct: 62 EETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFER 121
Query: 475 MCKVLENRAQQDEERMDQLTNQLKEAR 555
+ LE E++++++T++ + +
Sbjct: 122 RVQSLERERDDMEQKLEEMTDKYTKVK 148
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 36.7 bits (81), Expect = 0.003
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 15/178 (8%)
Frame = +1
Query: 100 MDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQV------- 258
++ +KK +A++ EK K ++ + +NEEV L+K++ Q
Sbjct: 1354 LEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRL 1413
Query: 259 -----EEDLILNKNKLEQ---ANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXR 414
E+ L K+ L + +L K K+LT+ AE A+ +++
Sbjct: 1414 AAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQES 1473
Query: 415 SGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSD 588
+ + +A+Q E + L++ ++ E+ + N+L+ + A DADGK++
Sbjct: 1474 ASS------DAEQITKE---QFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTE 1522
Score = 30.7 bits (66), Expect = 0.18
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKK 246
Q+ + + ++ LEKD K + QQ ++NLR + + E+ E++K+
Sbjct: 225 QEASLEKSQLSSQLSDAVLEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQ 279
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 430 QKLLEAQQSADENNRMCKVLENRA-QQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 606
+KLL+ + + ++E + Q+ R++QLTN+L+ + ++ + + K +E L
Sbjct: 641 EKLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSL 700
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.9 bits (79), Expect = 0.005
Identities = 33/181 (18%), Positives = 70/181 (38%), Gaps = 7/181 (3%)
Frame = +1
Query: 106 AIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKN 285
+++ +++ + E D+ K + + L + + N+ + + +L +E+++ +
Sbjct: 1029 SLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQKLLD 1088
Query: 286 KLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEA----QQ 453
+ +Q N +LEE + E A + ++ L E +Q
Sbjct: 1089 EKDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQ 1148
Query: 454 SADENNRMCKVLENRAQQDE---ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDE 624
+E N + LE +E E L N+L + + D+D + L V DE
Sbjct: 1149 LTNEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVNDE 1208
Query: 625 L 627
L
Sbjct: 1209 L 1209
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 33.9 bits (74), Expect = 0.019
Identities = 29/139 (20%), Positives = 65/139 (46%)
Frame = +1
Query: 205 AEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXX 384
AE + + + E+++ KN ++++ + EKE L E+E A
Sbjct: 73 AEGAEASTGDASTQSPETSENVV--KNSVDESVAEKPEKE-DLAVIESEDKAAKPDGEIK 129
Query: 385 XXXXXXXXXRSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLA 564
RS ++Q+K E ++ + + + + + ++ +ER++ LT + + A
Sbjct: 130 KNVETEVTSRSTSSQEKD-ELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANA 188
Query: 565 EDADGKSDEVSRKLAFVED 621
+D++GK VS++ A +E+
Sbjct: 189 DDSEGKQTLVSKREAALEE 207
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 33.5 bits (73), Expect = 0.026
Identities = 28/132 (21%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +1
Query: 148 NAMDKADTCEQQARDANL--RAEKVNEEVRELQKKLAQVEEDLILNKNK---LEQANXDL 312
N +++ D E+ A + + +++ E REL+ + V +D ++++N+ E+ N DL
Sbjct: 3925 NTLNEDDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDL 3984
Query: 313 EEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSADENNRMCKVLE 492
+E+ + + +LN K+ +QK E + +E++ + K +
Sbjct: 3985 DEEVNDIPEDLSN--SLNEKLWDEPNEEDLLE-----TEQKSNEQSAANNESDLVSKEDD 4037
Query: 493 NRAQQDEERMDQ 528
N+A +D++R ++
Sbjct: 4038 NKALEDKDRQEK 4049
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.5 bits (73), Expect = 0.026
Identities = 35/186 (18%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDA----NLRAEKVNEEVRELQKKL 249
Q+ + +++ A+ K NA+ +A++ + + D+ ++ ++ + E+ L K+L
Sbjct: 453 QENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQL 512
Query: 250 AQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQ 429
+EED +NKL + E QL E+ +
Sbjct: 513 QDIEEDY---ENKLMRMEQQWREDVDQLQEYVEEITQELQDTKEVLSKSSKESDDYEEVV 569
Query: 430 QKL-LEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 606
KL EA++ ++ + + E +E +++LT+++ + D + DE+ ++L
Sbjct: 570 GKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRL 629
Query: 607 AFVEDE 624
+E+E
Sbjct: 630 QTLEEE 635
Score = 27.9 bits (59), Expect = 1.3
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Frame = +1
Query: 100 MDAIKKKMQAMKLEKDNAMDKADTCEQQARD--ANLRAEKVNEEVRELQKKLAQVEEDLI 273
++++ ++ +K E M+ T ++ D +NL+ E+ N+E+ L KKL + E I
Sbjct: 696 IESLNDQLSQLKTE----MESVTTSKESLADYLSNLK-ERHNDELDSLNKKLREFEG--I 748
Query: 274 LNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQ-KLLEAQ 450
L+ N ++EE+ Q +L + + QQ + L+ +
Sbjct: 749 LSSN--SSLKSEIEERNNQYVTLRENFDSLQNAIMETFDKQVTHCSVNHLVQQIRKLKDE 806
Query: 451 QSADEN--NRMCKVLENRAQQDEERMDQLTNQLKEARLLAE--DADGKS 585
D++ +++ K + + Q +E+ + L + E + L DA+ +S
Sbjct: 807 NKKDQSGTDKLMKKIYHCEQSLKEKTNSLETLVSEKKELKNLLDAERRS 855
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 33.5 bits (73), Expect = 0.026
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +1
Query: 109 IKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRE---LQKKLAQVEEDLILN 279
++K+++ KLE+ + K D + L+ K+N +V E L+K + + ED L
Sbjct: 833 LRKQIERTKLEETSFKKKIDDAVLANNEQKLKLTKLNFQVNELEQLEKDINKSSEDCDLQ 892
Query: 280 KNKLEQANXDLEEKEKQLTATEAEVAALNRKV 375
K KL + + + L E+E L +
Sbjct: 893 KKKLLEVSSKQGSQAPFLNELESEYEKLEADI 924
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 33.1 bits (72), Expect = 0.034
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +1
Query: 220 EEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXX 399
EE+ E++K++ ++++++ + K ++ +L+ L+ E +
Sbjct: 87 EELAEMEKQIQELKDEVSVVKTLYKEKCIELQALNNSLSPAEIREKIQSIDKEIEETSSK 146
Query: 400 XXXXRSGTAQQKLLEAQQSADENNRMCKV-LENRAQQDEERMDQLTNQLKEARLLAE 567
R+GT +Q EA Q D+N K NR + + +T+ L+ + L E
Sbjct: 147 LESLRNGTVKQISKEAMQKTDKNYDFAKKGFSNRKKMFYDLWHLITDSLENPKQLWE 203
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 32.3 bits (70), Expect = 0.059
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVE 261
QQ+ ++D I+K +Q NA+++ +Q+A L EK+N+ E K++ QVE
Sbjct: 492 QQEELSLDDIRKSLQGKTEGISNAIEE----KQKAMAPAL--EKINQLTSE--KQILQVE 543
Query: 262 EDLILNKNKLEQANXDLEEKEKQL 333
D++LNK + N D+E + L
Sbjct: 544 LDMLLNKEN-DLIN-DVESSQSSL 565
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/106 (16%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Frame = +1
Query: 58 VFNSTGPXQQKAATMDA----IKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEE 225
V +G K+ TM +KK + + D + +TC++Q + + R + E
Sbjct: 772 VVTLSGQLIDKSGTMTGGGTRVKKGGMSSAITSDVSPASVETCDKQVQLEDTRYRQHLSE 831
Query: 226 VRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAAL 363
+ L ++ ++ E + + ++ + D+ ++ + E + L
Sbjct: 832 LESLNQRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRILQL 877
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.1 bits (67), Expect = 0.14
Identities = 19/77 (24%), Positives = 43/77 (55%)
Frame = +1
Query: 145 DNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKE 324
+NA++K E+ + + +K N+EV + + ++ Q++ N+L++ + +L+ +
Sbjct: 255 ENALEKVQR-EKDSLSTEMEEDKSNKEV-DYEYEIRQLQ-------NRLDELSEELDVAQ 305
Query: 325 KQLTATEAEVAALNRKV 375
LT E E+A L R++
Sbjct: 306 DLLTEKEDEIATLKRQI 322
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 30.7 bits (66), Expect = 0.18
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 217 NEEVRELQKKLAQVEED---LILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKV 375
N+E+ E KKL + +++ L+ N L + D EEK Q+ A EV A N+++
Sbjct: 143 NDEINERLKKLTEEQQNVDMLVAKVNFLSKHLHDNEEKLMQVNAKMDEVLAENKRL 198
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 30.7 bits (66), Expect = 0.18
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 220 EEVRELQKKLAQVEEDLILNKNKLEQANXDLEE--KEKQLTATEAEVAALNRKV 375
EE++ +KKL + E++ K K + LEE KE + TEA V A N+ +
Sbjct: 94 EEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADKEAKKAKTEAPVEAANKSL 147
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 30.3 bits (65), Expect = 0.24
Identities = 18/92 (19%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 AIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEK--VNEEVRELQKKLAQVEEDLILN 279
+IK +M MK E + K D + A ++ E + ++ ++ ++A+++ ++ +
Sbjct: 184 SIKGEMAEMKGEM--TVMKNDIASIKGEMAEMKGEMTIMKSDIDSVKGEMAEMKGEMTIM 241
Query: 280 KNKLEQANXDLEEKEKQLTATEAEVAALNRKV 375
KN ++ + + ++TA + ++ L+RK+
Sbjct: 242 KNDIDSVKGETTTLKGEVTAMKDSISQLDRKI 273
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 30.3 bits (65), Expect = 0.24
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Frame = +1
Query: 121 MQAMKLEKDNAMDKADTCEQQARDANLRAE-KVNEEVRELQKKLAQVEEDLILNKNKLE- 294
+ + +E ++ M+ +T + +R NL + + E V +Q +LA + L N ++E
Sbjct: 434 LATISIESNHTMETTNTLKFASRAQNLPQDIRQAEAVTNVQAELASLHSALEKNAQEVEY 493
Query: 295 ------QANXDLEEKEKQLTATEAE 351
Q DLEE++ + EAE
Sbjct: 494 YASLVKQLTSDLEERDTYIAMLEAE 518
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 30.3 bits (65), Expect = 0.24
Identities = 20/91 (21%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANL-RAEKVNEEVRELQKKLAQV 258
+Q A T +++K M ++ ++ A + Q+++ ++ + EK+ +E+++ ++
Sbjct: 90 EQAAMTTESLKNTMATVQTMQETARQ----LKSQSKNVSIEKIEKLQDEIQDYMDAAGEL 145
Query: 259 EEDLILNKNKLEQANXDLEEKEKQLTATEAE 351
E +L +N + N D EE + +L A + E
Sbjct: 146 NE--VLGQN-MTDINVDEEELDAELEALQQE 173
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.55
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVE 261
+Q A K++ +A K ++ + + +QQ + R EK ++ +E +KKL + +
Sbjct: 622 EQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEK--QKQKEREKKLKKQQ 679
Query: 262 EDLILNKNKLEQANXDLEEK 321
++ K EQ + EEK
Sbjct: 680 QEADREKMAREQRLREEEEK 699
Score = 26.2 bits (55), Expect = 3.9
Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 10/166 (6%)
Frame = +1
Query: 136 LEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLE 315
L K++ + EQ A R + N EL + + +ED ++ +++ DL
Sbjct: 472 LLKNDGKKFIEMMEQLAERRMQREDNSNFHEPELYESGLEYDEDEEEDEEDVDEDELDLM 531
Query: 316 EKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSADENNR------M 477
E+++ ++ R AQQ+ + + +E N+ +
Sbjct: 532 TDEQRMEEGRRMFQIFAARLFEQRVLQAY---REKVAQQRQAKLLEEIEEENKRKQEREL 588
Query: 478 CKVLENRAQQDEERMDQLT----NQLKEARLLAEDADGKSDEVSRK 603
K+ E ++D+++ +L Q +EA LAE A K+ E R+
Sbjct: 589 KKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQ 634
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 0.55
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +1
Query: 112 KKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKL 291
KKK K + A+D D + + K N++ + +K + EE + L
Sbjct: 152 KKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARKLASML 211
Query: 292 EQANXDLEEKEKQLTATEA 348
E N D + L T+A
Sbjct: 212 ESENKDNDANAAPLNKTDA 230
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 232 ELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKV 375
+L KK Q E+D+ +NKL + ++K K A+V A+N+K+
Sbjct: 517 QLAKKARQQEKDMAKLQNKLNMTGSEQQKKAK------AKVKAMNKKL 558
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.55
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Frame = +1
Query: 91 AATMDAIKK-KMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEED 267
++ ++ IK+ +M A+K +KD+ + + + + L+ EK ++L+ KL D
Sbjct: 1904 SSLVERIKQIEMFALKTQKDSNNHREENLQLHRQLGVLQKEK-----KDLELKLF----D 1954
Query: 268 LILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEA 447
L L + + D+ +KQ++ EA AA + + R T +Q LEA
Sbjct: 1955 LDLKTYPISTSK-DVRMLQKQISDLEASFAASDIE---RIKGIDECRNRDRTIRQ--LEA 2008
Query: 448 QQSADENNRMCKVLENRAQQDEERMDQLTNQLKEAR 555
Q S ++++ K +++ + EER QL NQL++ +
Sbjct: 2009 QISKFDDDK--KRIQSSVSRLEERNAQLRNQLEDVQ 2042
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 28.3 bits (60), Expect = 0.97
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 64 NSTGPXQQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQK 243
N+T ++A +K A KLE + + + A + L EK E R+LQ+
Sbjct: 847 NTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEK-QERERQLQE 905
Query: 244 KLAQVEEDLILNKNKLEQANXD----LEEKEKQ 330
+ +++E+++ + ++A+ D +++EKQ
Sbjct: 906 ERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQ 938
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 124 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 297
Q LEK+N + + E + +L +++ + ++ LAQ E L+ N L +
Sbjct: 900 QGTSLEKENEEEGKNPVESNCSEESLDDHNIDQTLVNKKETLAQDSESLLQKNNALNE 957
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 27.5 bits (58), Expect = 1.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 115 KKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLE 294
KK K + A K T ++A DA + N + +Q K+ Q+E++ + +K
Sbjct: 4 KKAAKGKGDPGKAAKKDPT--KKAADATFGLKNKNRSTK-VQAKIRQIEQNAAASGSKDA 60
Query: 295 QANXDL----EEKEKQLTATEAEVAAL 363
+ L EE+++ A +AEVAAL
Sbjct: 61 KRQEALRKRREEEKRAAEAAKAEVAAL 87
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 1.7
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = -3
Query: 529 AGPYAPRPAVPCSPTLCTYGCSRQP---TAGPRAASVGRCRTSPQISRGLPQXXALSC*G 359
A P P+P+V P G P A P P+ S P A S G
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS--G 1157
Query: 358 QRPRLRWRSAASPSLQGPXWPAPVCSCSGSGLPPPGRASSGVRGLP 221
P PS+ P PAP SG+PP + ++GV +P
Sbjct: 1158 APP------VPKPSVAAPPVPAP-----SSGIPPVPKPAAGVPPVP 1192
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/75 (17%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDAN---LRAEKVNEEVRELQKKLA 252
+Q A + + K + +K ++ ++ EQ+ +AN L+ E++ ++ + +++
Sbjct: 54 KQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEIN 113
Query: 253 QVEEDLILNKNKLEQ 297
+ L + K+ E+
Sbjct: 114 SLNSQLQIQKSNPEK 128
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 KKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKV-NEEVRELQKKLAQ 255
K+K+Q +K E+ + + E++ DA R EK+ NE V+++ +++
Sbjct: 201 KRKLQWVKEERTMLANHLEALERKLIDARNRKEKILNEIVKQVDPSISR 249
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 3.0
Identities = 21/90 (23%), Positives = 34/90 (37%)
Frame = +1
Query: 196 NLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKV 375
NL+ VN KLA +E L KN L++ + E ++ +L AE +
Sbjct: 40 NLKKPSVNSANETKNPKLASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSL 99
Query: 376 XXXXXXXXXXXXRSGTAQQKLLEAQQSADE 465
T+ QK +E ++ E
Sbjct: 100 QLRLTLVEKQLEEQSTSYQKEIEEVRNEKE 129
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.6 bits (56), Expect = 3.0
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 64 NSTGPXQQKAATMDAIKKKMQA-MK-LEKDNAMDKADTCEQQARDANLRAEKVNEEVREL 237
N + +++ A + KM+A MK + +K D +Q + R RE+
Sbjct: 381 NPSAKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENELRTRH-------REM 433
Query: 238 QKKLAQVEEDLILNKNKLEQANXDLE-EKEKQ 330
+ L + + DLI +KN+L QA E EK K+
Sbjct: 434 KAALEKQKADLIDHKNRLMQAKAAAENEKSKR 465
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +1
Query: 169 TCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEA 348
T E + A R + E ++ ++ Q +E L K KLE+ EEK+ +++
Sbjct: 18 TSELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLKYEEKKLRISRLAN 77
Query: 349 EVAALNRKV 375
+ ++ N ++
Sbjct: 78 KESSRNEEL 86
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 352 PRLRWRSAASPSLQGPXWPAPVCSCSGSGLPPPGRASSGVRGLPRLP 212
P +R +SAA P + P P P S +PPP A G P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMS-----VPPPPSAPPMPAGPPSAP 1731
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 142 KDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEK 321
KD+ + + + +NLRA E +KKL E + N+ L AN L E
Sbjct: 280 KDDTFNDYSSASMELNTSNLRARASFSNFMENEKKL---YEKVNTNRTLLRNANLTLNEA 336
Query: 322 EKQL 333
++ +
Sbjct: 337 QQSV 340
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 505 AVPCSPTLCTYGCSRQPTAGPRAASV 428
AVP SPTL + QPT P +A+V
Sbjct: 263 AVPLSPTLAVWLPMTQPTFQPPSANV 288
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 151 AMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQ 330
A +KA ++ R A A+ E+ +E QK Q E+D + +KN++++ +E +++
Sbjct: 251 AREKAREARRR-RSAQNSAKLEKEKAKEKQKDKDQ-EQDTVSDKNQIDEIEKGQKEVDEE 308
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/75 (21%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 94 ATMDAIKKKMQAMKLE--KDNAMDKADTCEQ-QARDANLRAEKVNEEVRELQKKLAQVEE 264
+ +D K K+ +E + D +T + A D + +E + +++ E+Q+ +V E
Sbjct: 591 SNLDIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFE 650
Query: 265 DLILNKNKLEQANXD 309
+ N+N+ +++ D
Sbjct: 651 SVYKNQNQGNESSGD 665
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 166 DTCEQQARDANLRAEKVNEEV 228
D C++ +DANL+ ++NE +
Sbjct: 361 DPCKRALKDANLQTSEINEVI 381
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/80 (17%), Positives = 34/80 (42%)
Frame = +1
Query: 112 KKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKL 291
+KK + ++ K+N ++ D+ + Q + + +E QK + E + +
Sbjct: 96 RKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQ 155
Query: 292 EQANXDLEEKEKQLTATEAE 351
+Q ++E E + +E
Sbjct: 156 QQLKLEIERLEAETERANSE 175
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 6.8
Identities = 28/170 (16%), Positives = 64/170 (37%), Gaps = 8/170 (4%)
Frame = +1
Query: 88 KAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKL--AQVE 261
K A ++ + + LE D + K Q + + ++E+++ L+ +L ++++
Sbjct: 543 KEAVSKTLELREKVRALECDVEIQKQTVQYQISNAVKENSNTLSEQIKNLESELNSSKIK 602
Query: 262 EDLILN-----KNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTA 426
+ +LN K L + + + ++ +++
Sbjct: 603 NESLLNERNLLKEMLATSRSSILSHNSSAGNIDDKMKSIDESTRELEKNYEVYRNEMTAI 662
Query: 427 QQKLLEAQQSA-DENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDA 573
Q+ L + Q E + K LEN Q + D+LTN + ++A
Sbjct: 663 QESLSKRNQDLLSEMEAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEA 712
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 208 EKVNEEVRELQKKLAQVEEDLILNKNKLEQA 300
E + +E++E + LAQ EE++ K+KL+ A
Sbjct: 295 EPLKKELQETKTLLAQKEEEISNLKDKLQNA 325
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 325 SPSLQGPXWPAPVCSCSGSGLPPP 254
+P + GP P P +G+G PPP
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 6.8
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 130 MKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXD 309
M E+ + D A ++A+ + AEK+ E + ++ EDLI NK + D
Sbjct: 633 MLTERFYSDDTARNALKEAKASRAMAEKMVIERDAMAAQVNLGAEDLIAKLNKEVEDQKD 692
Query: 310 LEEKEKQLTAT-EAEVAALNR 369
+ +K+ T + E+ AL +
Sbjct: 693 VILSQKRTNETLKTEIDALQK 713
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 80 YGPVELNTPHERAVHHRRSDT 18
YGP L+TP+ R + H+R T
Sbjct: 245 YGPT-LSTPYNRRLRHKRHST 264
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.0 bits (52), Expect = 9.0
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = +1
Query: 100 MDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVR------ELQKKLAQVE 261
M +K A ++ +MD +D C ++ + R K+ E+ + E + K
Sbjct: 112 MSLLKVIKDAEDTTEEKSMDDSDKCLRRLKSHKERLLKLLEDAQKEYDTLEAESKNYITS 171
Query: 262 EDLIL--NKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQK 435
EDL L + +++ + +K K T + +LN +G A +
Sbjct: 172 EDLHLGFDSTYVQKKEPEKPKKTKTKKETIQVIESLNNPTPPTDFPGAKEQASTGNAPKN 231
Query: 436 LLEAQQSADE 465
+ +S DE
Sbjct: 232 PVNENESEDE 241
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 533 PTN*KRPVSSPRTLTENPTRFRENW 607
P+N K PV R+ + R ++NW
Sbjct: 229 PSNVKSPVQQHRSFVSSSARAKKNW 253
>SPBC2A9.08c |sec22||SNARE Sec22|Schizosaccharomyces pombe|chr
2|||Manual
Length = 209
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 145 DNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 297
D M K+ R AN +K+N E++++ + + + EDL+ + LE+
Sbjct: 109 DTFMQKSKRVYNTPR-ANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEK 158
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 494 TGHSRTRSVWTSSPTN*KRPVSSPRTLTENP-TRFRENW 607
+G RT+S+ SP ++P T + P T +E+W
Sbjct: 406 SGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKESW 444
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 112 KKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRE 234
KK A K KDN KA QQ R+ NL+ + +++ ++
Sbjct: 181 KKSSDAWKERKDNEK-KAMLMRQQRREENLKKRRESKKSKK 220
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 103 DAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLI 273
D +K+K++ KLE +N +K E++ +D E N+ + + +V+ LI
Sbjct: 168 DIMKRKLETEKLEANNKEEKE---EKEGKDDKDDKEDSNDTKNDKKISKNEVDSSLI 221
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.128 0.336
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,117,025
Number of Sequences: 5004
Number of extensions: 38529
Number of successful extensions: 227
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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