Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K23
(630 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 56 1e-09
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 39 1e-04
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 33 0.006
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 33 0.007
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 31 0.030
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 28 0.21
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.65
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.5
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.0
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 2.6
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 2.6
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 2.6
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 2.6
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 24 4.6
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 6.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 6.1
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 23 8.0
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 55.6 bits (128), Expect = 1e-09
Identities = 37/182 (20%), Positives = 84/182 (46%)
Frame = +1
Query: 82 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVE 261
QQ ++ + KK++ ++ A + C + +D L+A K+ + +++L E
Sbjct: 737 QQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKD--LQA-KIADGKGHRERELKSAE 793
Query: 262 EDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLL 441
EDL +K K E++ + ++ E+ + E+ L + + + QQ+L+
Sbjct: 794 EDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLV 853
Query: 442 EAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED 621
E + DE L+ + +Q +E+M+ + +LK + ++DE+ ++ E+
Sbjct: 854 EVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKEN 913
Query: 622 EL 627
E+
Sbjct: 914 EI 915
Score = 30.3 bits (65), Expect = 0.053
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Frame = +1
Query: 268 LILNKNKLEQANXDLEEKEKQLTATEAEVAALNR--------KVXXXXXXXXXXXXRSGT 423
++L+ ++ + L+EKE +L AEV+ + + K +
Sbjct: 672 VLLDVAEINRIQAMLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQRL 731
Query: 424 AQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRK 603
AQ + ++ +E N+ + L+ + E Q + ++K+ L A+ ADGK R+
Sbjct: 732 AQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKD--LQAKIADGKGHR-ERE 788
Query: 604 LAFVEDEL 627
L E++L
Sbjct: 789 LKSAEEDL 796
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/67 (16%), Positives = 34/67 (50%)
Frame = +1
Query: 133 KLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDL 312
+L++ + M + + R A ++ EE+ EL KK+ +++ ++ + Q + +
Sbjct: 712 QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV 771
Query: 313 EEKEKQL 333
++ + ++
Sbjct: 772 KDLQAKI 778
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 39.1 bits (87), Expect = 1e-04
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Frame = +1
Query: 85 QKAATMDAIKK----KMQAMKL--EKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKK 246
QK +DA+K+ K QA K E D + KA+ Q + E+ + E
Sbjct: 1345 QKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNL 1404
Query: 247 LAQVEEDLILNKNKLEQANXDLEEKEKQLT-ATEAEVAALNRKVXXXXXXXXXXXXRSGT 423
+ +E ++ +++ L++A L + A + A ++ R+
Sbjct: 1405 VPNIERQIVNSRDLLQRAEEALYAASRNAEDARKNAQTAQDKYAEEASKLAENIKKRANA 1464
Query: 424 AQQKLLEAQQSADE-NNRMCKVLENRAQQDEE--RMD-QLTNQLKE----ARLLAEDADG 579
+ + AD+ N R+ K +NR ++ E R D LTN+ KE A+L + +A
Sbjct: 1465 TKNTARDLHHEADQLNGRLAKT-DNRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKS 1523
Query: 580 KSDEVSRKLAFVEDEL 627
+ D+ R+++ + EL
Sbjct: 1524 QVDKAMREVSLIMSEL 1539
Score = 25.8 bits (54), Expect = 1.1
Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 5/162 (3%)
Frame = +1
Query: 157 DKADTCEQQARDANLRAEK-VNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQL 333
+K D + A+ + EK +NE +REL+ +L +V++ L E N + +
Sbjct: 1082 EKIDILVEDAKSGSGVGEKTLNEILRELEARLQEVQKLLDNADQSQEVTNHKISKGGYNA 1141
Query: 334 TATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSADENNRMCKVLENRAQQDE 513
T ++ R++ TA + + + A+Q
Sbjct: 1142 TLANGKIQDARRQL---DNAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYA 1198
Query: 514 ERM----DQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDEL 627
+R D Q +EA A +A K+++ + A + EL
Sbjct: 1199 DRFKAEADANMKQAQEAHKKASEALKKANDAFNQQANITKEL 1240
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 33.5 bits (73), Expect = 0.006
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Frame = +1
Query: 175 EQQARDANLRAEKVNEEVRELQKK------LAQVEEDLILNKNKLEQANXDLEEKEKQLT 336
E+ L+ EK+ EE++E+ KK L VE + +N+L+ + DLE +K +
Sbjct: 681 EKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLETSKKNIN 740
Query: 337 ATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSA-----DENNRMC-KVLENR 498
+ ++ R++ R K+ + ++S D C ++
Sbjct: 741 EYDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQDIKESMNNVEDDVYAEFCARIGVAN 800
Query: 499 AQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAF 612
+Q EER +L Q + A+ AE + + D ++ L F
Sbjct: 801 IRQFEER--ELVLQQERAKKRAE-FEQQIDRINNNLEF 835
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 33.1 bits (72), Expect = 0.007
Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 6/173 (3%)
Frame = +1
Query: 115 KKMQAMKLEKDNAMDKAD--TCEQQARDANLRAEKVNEE--VRELQKKLAQVEEDLILNK 282
KK+Q L + + + E + + LR E + + +LQK + + + L +
Sbjct: 754 KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Query: 283 NKLEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSAD 462
++Q + K+ + A EAE+A + + QQ L + +S +
Sbjct: 814 RTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESME 873
Query: 463 ENNRMCKVLENRAQQDEERMDQLTNQLKEARLL--AEDADGKSDEVSRKLAFV 615
E R L +Q + + + E+ + E GK +++ V
Sbjct: 874 ERKRTRVALSAALEQARQEASEKGERPDESEQIPSVEQLKGKIHTTEKRIRLV 926
Score = 27.9 bits (59), Expect = 0.28
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +1
Query: 103 DAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRA--EKVNEEVRELQKKLAQVEEDLIL 276
D KK + + L++ + + QA+ A + +E V +QK Q+E+DL
Sbjct: 369 DIESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDLQE 428
Query: 277 NK----NKLEQANXDLEEKEKQLTATEAEVAAL 363
+++EQ +E ++ QL E+A++
Sbjct: 429 RNRDGLSQVEQRKQAVETEKAQLKERNDELASM 461
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 31.1 bits (67), Expect = 0.030
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +3
Query: 195 QPPC*EGKRGSPRTPEEARPGGGRPDPE----QEQTGAGQXGP*REGEAADRHRSRGRCP 362
QPP G+ +P PGGGR + + Q G G G E + SR R P
Sbjct: 494 QPPP-GGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGGGGGGGGGREGSQEWNSRSRPP 552
Query: 363 QQES 374
QQ S
Sbjct: 553 QQHS 556
Score = 25.8 bits (54), Expect = 1.1
Identities = 27/97 (27%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = +3
Query: 192 RQPPC*EGKRGSPRTPEEARPGGGRPDPEQEQTGAGQXGP*REGEAADRH--RSRGRCPQ 365
R PP + +P + ARP G P Q G GP R G R G PQ
Sbjct: 163 RPPPI--AHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQ 220
Query: 366 QESAXX*GRPREI*GEV-RHRPTEAARGPAVG*REQP 473
RP+ G V +P R P+ ++P
Sbjct: 221 PPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRP 257
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 28.3 bits (60), Expect = 0.21
Identities = 24/138 (17%), Positives = 57/138 (41%)
Frame = +1
Query: 109 IKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 288
+++ + K + + + E+Q + L+ E NE+++E Q++ + ED + + +
Sbjct: 71 VRRMLADAKADNETTVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAE 130
Query: 289 LEQANXDLEEKEKQLTATEAEVAALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQSADEN 468
+ +E L A + R R +QQ+ + QQ D+
Sbjct: 131 HREELRKEKELFNALLAQTLGGTSGARLESQQELQREQELLRRMESQQRQEQRQQLEDQQ 190
Query: 469 NRMCKVLENRAQQDEERM 522
+ + + + QQ ++R+
Sbjct: 191 RQRWR-QQQQKQQRQQRL 207
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 26.6 bits (56), Expect = 0.65
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 190 DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANXDLEEKEKQLTATEAEVAALNR 369
+AN R E++NEE+ +++ + + +E + +L EE EK A E + ALN+
Sbjct: 14 EANARNERINEELTQMRILMTKQQE--YTERREL----IAREEMEKMRAAHERDRTALNK 67
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.4 bits (53), Expect = 1.5
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +1
Query: 124 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN 303
+ MKLE+++ + E++AR+A A + E+ REL+++ + + + K + E+
Sbjct: 439 ERMKLEEEHRAARLRE-EERAREAREAAIE-REKERELREQREREQRE----KEQREKEQ 492
Query: 304 XDLEEKEKQ 330
+ EE+E+Q
Sbjct: 493 REKEERERQ 501
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.0 bits (52), Expect = 2.0
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -3
Query: 322 PSLQGPXWPAPVCSCSGSGLPPP--GRASSGVRGLPRLPSQHG 200
P L+GP P G G P P + G+ G+ LP +G
Sbjct: 331 PGLEGPSGPKGDAGVPGYGRPGPQGEKGDIGLTGVNGLPGLNG 373
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 24.6 bits (51), Expect = 2.6
Identities = 13/86 (15%), Positives = 39/86 (45%)
Frame = +1
Query: 73 GPXQQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLA 252
GP QQ+ ++ Q + ++ + +QQ + N + E ++ ++ ++
Sbjct: 216 GPQQQEQRQQQ--QQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQRE 273
Query: 253 QVEEDLILNKNKLEQANXDLEEKEKQ 330
Q ++ + +N+ Q +++++Q
Sbjct: 274 QQQQQRVQQQNQQHQRQQQQQQQQRQ 299
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.6 bits (51), Expect = 2.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 412 RSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 549
R GT+ Q A + A ++R + ++ RAQ+ + +++ L Q E
Sbjct: 750 RMGTSVQTKTSASEPAGASSREIEQMQIRAQEIQTQINYLQEQQGE 795
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 24.6 bits (51), Expect = 2.6
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +1
Query: 187 RDANLRAEKVNEEVRELQKKLAQVEEDL--ILNKNKLEQANXDLEE--KEKQLTATEAEV 354
R++ + EK++E +R ++ +L +EE+ + K ++A LE E +L T ++
Sbjct: 180 RESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQL 239
Query: 355 AALNRKVXXXXXXXXXXXXRSGTAQQKLLEAQQS 456
L+ + AQ +L AQ++
Sbjct: 240 EELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKA 273
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 544 KEARLLAEDADGKSDEVSRKLAFVEDEL 627
+E+ L +++GK +++S L +ED L
Sbjct: 173 EESMNLLRESEGKLEKISEYLRTIEDRL 200
Score = 23.0 bits (47), Expect = 8.0
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +1
Query: 115 KKMQAMKLEKDNAMDKADTCEQQAR--------DANLRAEKVNEEVRELQKKLAQVEEDL 270
K+M+ +++ K D C ++ DA+ + + +EL+K +++
Sbjct: 920 KRMEKWATKENMLRQKIDECTEKIAGLGALPNVDASYQKMSLKSLFKELEKANQHLKKYN 979
Query: 271 ILNKNKLEQANXDLEEKEK 327
+NK L+Q E+KEK
Sbjct: 980 HVNKKALDQFLSFSEQKEK 998
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.6 bits (51), Expect = 2.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 476 CAKCWRTGH 502
C KCW TGH
Sbjct: 418 CFKCWETGH 426
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.8 bits (49), Expect = 4.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 476 CAKCWRTGHS 505
C KCW+ GH+
Sbjct: 277 CYKCWKVGHT 286
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 529 AGPYAPRPAVPCSPTLCTY 473
A P PR +V C PT C +
Sbjct: 1 ARPQRPRLSVTCRPTKCLH 19
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 225 SPRTPEEARPGGG 263
SP+ PEEA GGG
Sbjct: 901 SPKDPEEAAVGGG 913
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 23.0 bits (47), Expect = 8.0
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 476 CAKCWRTGH 502
C KCW+ GH
Sbjct: 330 CFKCWKLGH 338
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.317 0.128 0.336
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,845
Number of Sequences: 2352
Number of extensions: 10669
Number of successful extensions: 63
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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