Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K20
         (703 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo...   123   3e-29
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces...    27   2.6  
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    27   2.6  
SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    27   3.4  
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam...    26   4.5  
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb...    26   4.5  
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc...    26   6.0  
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra...    26   6.0  
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p...    25   7.9  
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac...    25   7.9  
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3...    25   7.9  

>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 395

 Score =  123 bits (296), Expect = 3e-29
 Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = +3

Query: 270 KERGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRS 449
           K R    YG ++LVDG++ DGL+D Y+   MGN AE  A++  I R  QD +A++SYKR+
Sbjct: 129 KNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISSYKRA 188

Query: 450 AAAYEAKAFVDELVPVPVPQKRGAP-VIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAG 626
             A   KAF  E+VPV VP  RG P  +  EDEE K +N +K   +  VF K NGTVTA 
Sbjct: 189 QNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVF-KSNGTVTAA 247

Query: 627 NASTLNDG 650
           NASTLNDG
Sbjct: 248 NASTLNDG 255



 Score = 27.1 bits (57), Expect = 2.6
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = +3

Query: 132 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKE 275
           EV I SAVRTPM                   +  A+ER  I   ++ E
Sbjct: 5   EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDE 52


>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 735

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 172 EPIGVLTADAITTSLRETLVENAAIAVNICNKTLKSNKTMFLL 44
           E +G+L  D +   L + +VEN    +    K L +N+T +LL
Sbjct: 295 ESLGLLVDDRV--DLAKGMVENFIFEITYYGKILNANRTYYLL 335


>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1096

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 31  WLLCPTETSSYWTLTSYCRYLQ 96
           W+L P ETS+Y  +TS   Y+Q
Sbjct: 143 WVLMPLETSAYSLVTSTPAYIQ 164


>SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 536

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 525 VIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDG 650
           +IF+ED+E   ++F++F   S +    N  +    AS L  G
Sbjct: 445 LIFSEDKEQSSISFQEFVSFSPLSSTLNFALFHQAASKLKTG 486


>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
           Mam3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1082

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = -1

Query: 388 FAVFSAQFPM*NLLYTSVSPSNTIPSTNCIPPYEVSPLSFISSLGIPALSIAALTATAPN 209
           F   S+   + N   +  +PS TIP++N     + S    ISS   P +S ++LTAT+ +
Sbjct: 521 FTSASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISS---PIIS-SSLTATSTS 576

Query: 208 SDA 200
           + A
Sbjct: 577 TPA 579


>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 411 DQDEYAVNSYKRSAAAYEA-KAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEK 572
           ++ +YA +S +  A  YE  K  +  L+ +PV Q     VIF   + Y RV  EK
Sbjct: 208 NESDYA-SSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRVYVEK 261


>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 899

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 151 ADAITTSLRETL-VENAAIAVNICNKTLKSNKTMFLLD 41
           ++ I  S+R T+ +E A +A  +CN +   NK   +LD
Sbjct: 358 SEHIELSVRRTVGIEKALLAAALCNNSKVHNKADSILD 395


>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
           transporting Cta4 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1211

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 340 MCTTNFTWEIVLKTQQKNYKLLDKIKMNMLSIVTREV 450
           +  + + W +  KT++  YKL+    M + S+V  E+
Sbjct: 409 IAASGYVWHVGSKTERSRYKLMLDCVMIITSVVPSEL 445


>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 926

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 280 PLSFISSLGIPALSIAA-LTATAPNSDADKLDKLPRKE 170
           PL ++  + I  +SI++ +  TA  +  + LD++P KE
Sbjct: 329 PLVYVFLIDISFVSISSGMVGTASRAILESLDRIPNKE 366


>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 853

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 145 HQQLELLWVLS-EGAYLVYQHQNWALSLLTRQSKE 246
           HQ +E  W+ S EG  L Y    ++LSL     KE
Sbjct: 125 HQDIE--WITSTEGTVLYYDQSTFSLSLFYPDGKE 157


>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 334

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 581 FCKLFKINSFILFIFSKYYRSPSFLW 504
           F KLF+I+ +IL +FS Y    +  W
Sbjct: 73  FSKLFRISLYILGVFSLYMFRWAIAW 98


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,359,229
Number of Sequences: 5004
Number of extensions: 43230
Number of successful extensions: 190
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)