Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K20
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa ...   164   5e-41
U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical pr...   121   4e-28
Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical p...    76   3e-14
M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical pr...    61   7e-10
AF098499-2|AAC67396.1|  155|Caenorhabditis elegans Hypothetical ...    29   2.4  
U41534-11|AAM22028.1|  686|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z36948-4|CAA85411.3|  615|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z81545-10|CAB04448.1|  170|Caenorhabditis elegans Hypothetical p...    28   7.4  
U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U23170-3|AAC46700.2|  125|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL031627-25|CAA20971.1|  170|Caenorhabditis elegans Hypothetical...    28   7.4  

>U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa
           thiolase protein 1 protein.
          Length = 407

 Score =  164 bits (399), Expect = 5e-41
 Identities = 77/126 (61%), Positives = 98/126 (77%)
 Frame = +3

Query: 273 ERGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSA 452
           +RGE  YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDEYA+NSYK+SA
Sbjct: 146 QRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDEYAINSYKKSA 205

Query: 453 AAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNA 632
            A+E      E+VPV V  K+G  ++  +DEE+ +VNF+KFT L TVFQK+ GT+TA NA
Sbjct: 206 KAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANA 263

Query: 633 STLNDG 650
           STLNDG
Sbjct: 264 STLNDG 269


>U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical
           protein T02G5.7 protein.
          Length = 390

 Score =  121 bits (292), Expect = 4e-28
 Identities = 60/126 (47%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
 Frame = +3

Query: 276 RGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAA 455
           RGE  +GG+Q+ DGI  DGL D+  K  MG CAE T K   ITR++QD YA+ SYK+++ 
Sbjct: 129 RGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESYKKASN 188

Query: 456 AYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKE-NGTVTAGNA 632
           A+ ++ F +E+VPV V   R + V+  EDEEYK++   K + L  VF ++  GT+T  NA
Sbjct: 189 AWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANA 247

Query: 633 STLNDG 650
           S+LNDG
Sbjct: 248 SSLNDG 253


>Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical
           protein F53A2.7 protein.
          Length = 394

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 43/122 (35%), Positives = 66/122 (54%)
 Frame = +3

Query: 285 TSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE 464
           T+ G     + +++D L+D Y K  MG  AE    + ++TRQ+ DE+A+ S      A E
Sbjct: 135 TALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQE 194

Query: 465 AKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLN 644
           A  + +E+V + +  ++G    F  DE  +    E   KL  VFQK+ G V AGNAS ++
Sbjct: 195 AGVYKNEIVGITIKGRKGEE-SFEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGIS 252

Query: 645 DG 650
           DG
Sbjct: 253 DG 254


>M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical
           protein B0303.3 protein.
          Length = 448

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = +3

Query: 360 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAE 539
           MG+  +  A    ++R++QDE+A+ S+  ++ A +   F D +VPV +  K+  P    E
Sbjct: 195 MGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PKTIKE 251

Query: 540 DEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDG 650
           D   +    EK + L   F K +GTVTA NAS L DG
Sbjct: 252 DNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDG 288


>AF098499-2|AAC67396.1|  155|Caenorhabditis elegans Hypothetical
           protein C43H8.1 protein.
          Length = 155

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 309 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 431
           +DG++F  L +  N FH   C    AK+++I R D+ ++ +
Sbjct: 72  LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110


>U41534-11|AAM22028.1|  686|Caenorhabditis elegans Hypothetical
           protein C16A3.1b protein.
          Length = 686

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +3

Query: 405 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKL 584
           R++    A    +R  AA  A A      P P P K   PV+F+++ +  +      TK 
Sbjct: 15  REEAIRRAAAYREREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQ 73

Query: 585 STV 593
           ST+
Sbjct: 74  STI 76


>Z36948-4|CAA85411.3|  615|Caenorhabditis elegans Hypothetical
           protein D2089.4a protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 465 AKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 620
           A AFV  +  VP+ Q RG   +FA+   ++ + F+K   +S      NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218


>Z81545-10|CAB04448.1|  170|Caenorhabditis elegans Hypothetical
           protein F49H6.13 protein.
          Length = 170

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 409 CLVICNFFAVFS 374
           C ++CNFFAVFS
Sbjct: 15  CAIVCNFFAVFS 26


>U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical
           protein B0286.3 protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 337 VSPSNTIPSTNCIPPYEVSPLSFISSLGIPALSIAALTATAPNSDA 200
           ++ ++++P  NC PP E + L   SSL +P   I   T   P+  A
Sbjct: 342 IAGNSSLPVINCPPPSESTSLDIWSSLRMPN-GIGCTTVLDPSEAA 386


>U23170-3|AAC46700.2|  125|Caenorhabditis elegans Hypothetical
           protein F58F12.2 protein.
          Length = 125

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/45 (22%), Positives = 21/45 (46%)
 Frame = -3

Query: 563 INSFILFIFSKYYRSPSFLWNGYRYXXXXXXXXXXXSCTSLVTID 429
           I S   F+F  +++  ++LWN +++             T L+ +D
Sbjct: 17  IYSIFKFLFKLFFKFVNYLWNSHKFHEQLVLHNLRKRLTQLIKVD 61


>AL031627-25|CAA20971.1|  170|Caenorhabditis elegans Hypothetical
           protein F49H6.13 protein.
          Length = 170

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 409 CLVICNFFAVFS 374
           C ++CNFFAVFS
Sbjct: 15  CAIVCNFFAVFS 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,041,447
Number of Sequences: 27780
Number of extensions: 246338
Number of successful extensions: 914
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)