Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K17
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0603 - 23580283-23580627,23580970-23581174,23581286-235814... 122 4e-28
02_02_0133 + 7077855-7078010,7078100-7078834 106 2e-23
01_06_0527 - 30018814-30019638 100 1e-21
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 33 0.18
04_04_1624 - 34849385-34849410,34849748-34851052,34852121-348522... 31 1.3
05_06_0258 + 26730904-26731239 30 1.7
02_04_0178 + 20672705-20672919,20673385-20673486,20673925-206740... 30 2.2
12_01_0355 - 2704909-2705745 29 2.9
10_08_0233 - 16061182-16061714,16062765-16063578 29 2.9
08_02_1077 - 24160545-24161936 29 2.9
02_02_0477 + 10759726-10759787,10760008-10760096,10760460-10761406 29 2.9
11_01_0300 + 2253957-2254245,2254783-2254850,2254967-2255098,225... 29 3.9
11_01_0052 - 396822-396965,397332-397541,397686-397815,397956-39... 29 3.9
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192... 29 5.1
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 29 5.1
01_01_0681 + 5235623-5235873,5235958-5236285,5236786-5236935,523... 29 5.1
02_04_0226 + 21073967-21074179,21074711-21074832,21074926-210753... 28 6.7
11_03_0006 + 8878611-8878724,8879323-8879706 28 8.9
08_01_0216 - 1717696-1718265,1718856-1720082,1720558-1720627,172... 28 8.9
06_02_0315 - 14230234-14232771 28 8.9
>01_05_0603 -
23580283-23580627,23580970-23581174,23581286-23581407,
23581493-23581675
Length = 284
Score = 122 bits (293), Expect = 4e-28
Identities = 76/223 (34%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Frame = +2
Query: 74 VAFFDFDRTIVDDDSDATIINKLREKKPPPDWESSNHDWTPYMSDVFEHAYSAGLSEEDI 253
V FDFDRTI++ DSD +I KL + W P M + ++ G S +DI
Sbjct: 20 VVVFDFDRTIIEWDSDDWVITKLGASDAFRRLRPTMR-WNPLMDRMMVELHAQGRSADDI 78
Query: 254 LSCIASMKPNLGVQQLIRTLSQQGWEIVVITDANSVFVNHWLTEHGLLQYITNVITNRA- 430
C+ S + V I T S G ++ V +DAN+ F+ L HG+L + + TN A
Sbjct: 79 RDCLKSAPLDAHVLSAITTASALGCDLRVASDANAFFIETVLEHHGVLGCFSEISTNPAR 138
Query: 431 FWRHSRLYIEPY-----MKQTSCPRCPKNLCKSEALRR-WCSEMPARRIVYVGDGRNDYC 592
+ RL I P+ C CP+N+CK + + R + R +Y+GDGR DYC
Sbjct: 139 VDGNGRLRISPFHDPDDSSPHGCSLCPENMCKGKIIERIQATANGKRHFIYIGDGRGDYC 198
Query: 593 PATSLPPHATVFPRRGYPLDDLVXKTLSSPNPQVKAKVIPWDN 721
P+ L V P+ YPL +L+ SS +KA+V PW+N
Sbjct: 199 PSLKLGEGDYVMPKEKYPLWNLI----SSNKQLLKAEVHPWNN 237
>02_02_0133 + 7077855-7078010,7078100-7078834
Length = 296
Score = 106 bits (255), Expect = 2e-23
Identities = 74/229 (32%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Frame = +2
Query: 74 VAFFDFDRTIVDDDSDATIINKLREKKPPPDWESSNHDWTPYMSDVFEHAYSAGLSEEDI 253
V FDFD+TI+D DSD +++ L D W + + ++ G + E++
Sbjct: 11 VVVFDFDKTIIDCDSDNWVVDALGATARFDDL-LCRLPWNSAIDAMMGELHAEGRTVEEV 69
Query: 254 LSCIASMKPNLGVQQLIRTLSQQGWEIVVITDANSVFVNHWLTEHGLLQYITNVITN-RA 430
+ + + + V + T G E+ V++DAN+ FV L HGL + V TN A
Sbjct: 70 AASLRAAPLSPRVAAAVETARALGCELRVLSDANAFFVGAVLDHHGLAGCFSAVDTNPAA 129
Query: 431 FWRHSRLYIEPY--MKQTSCP--RCPKNLCKSEALRRWCSEMPA----------RRIVYV 568
RL I PY + CP CP N+CK + + R E+ RR+VYV
Sbjct: 130 VDADGRLRILPYHGLPGHGCPLATCPPNMCKGKVMERIIDELSCGCGGALAARRRRVVYV 189
Query: 569 GDGRNDYCPATSLPPHATVFPRRGYPLDDLVXKTLSSPNPQVKAKVIPW 715
GDGR DYCP+ L V PR+GYP+ DL+ V+A V W
Sbjct: 190 GDGRGDYCPSLKLTEMDYVMPRKGYPVWDLI---AGGDRAAVRADVREW 235
>01_06_0527 - 30018814-30019638
Length = 274
Score = 100 bits (240), Expect = 1e-21
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Frame = +2
Query: 74 VAFFDFDRTIVDDDSDATIINKLREKKPPPDWES--SNHDWTPYMSDVFEHAYSAGLSEE 247
V FDFD+TI+D DSD +++ L + ++E W M + +++G S
Sbjct: 5 VVVFDFDKTIIDVDSDNWVVDGLGATE---EFERLLPTMPWNTLMDTMMGELHASGKSLA 61
Query: 248 DILSCIASMKPNLGVQQLIRTLSQQGWEIVVITDANSVFVNHWLTEHGLLQYITNVITNR 427
D+ + S + V I+ G ++ +++DAN F++ L HGL Y + + TN
Sbjct: 62 DVAGVLRSAPLDPRVVAAIKACYGLGCDLRILSDANRFFIDTILDHHGLTGYFSEINTNP 121
Query: 428 AFWRHS--RLYIEPYMKQTSCPR------CPKNLCKSEALRRWCSEMPA--RRIVYVGDG 577
+ + RL I PY + P CP N+CK + L R + A +R++Y+GDG
Sbjct: 122 SAVDAATGRLRIAPYHDFHAGPHGCGLGICPPNMCKGQVLDRIRASAGAAGKRVIYLGDG 181
Query: 578 RNDYCPATSLPPHATVFPRRGYPLDDLVXKTLSSPNPQV 694
R DYCP+ L + PRRG+P+ +L+ + S + +V
Sbjct: 182 RGDYCPSLRLGRDDFMMPRRGFPVWELICEDPSLLHAEV 220
>03_06_0157 - 32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 583 VSPVPYIHDTPGRHLRAPASQGLALAEVLRAPGAGRLLHI-GLDVQTAVPPERTICDDIR 407
V P +D P HLR P SQ LA + +++AP + + L + P + +
Sbjct: 882 VDPPTISNDIPN-HLRTPTSQFLATSHIMQAPYIAQQFGLSSLQGFPGISPFGQLQEPAP 940
Query: 406 YILQQPVLRQP 374
LQQP L+QP
Sbjct: 941 APLQQPHLQQP 951
>04_04_1624 - 34849385-34849410,34849748-34851052,34852121-34852294,
34852386-34852456,34852563-34852618,34853047-34853185,
34853310-34853695,34853801-34853851,34853936-34854021,
34854112-34854553,34856241-34856315,34856457-34856593,
34856679-34856838,34856917-34857012,34857093-34857247,
34857900-34858032
Length = 1163
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 553 PGRHLRAPASQGLALAEVLRAPGAGRLLHIGLDVQTAVPPERT 425
PG R PAS G A A++ R + H+G V T + P RT
Sbjct: 968 PGPGGRPPASTGRAGADLARDYNKNAIRHLGSGVGTPLMPNRT 1010
>05_06_0258 + 26730904-26731239
Length = 111
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = -3
Query: 683 WETRASXSPGRPVDSRGGGTLSRVGAATWRGSNRFSRPLHTRYAW-PASPSTSVSGPRSC 507
W+ R +P D GGG +RV + G + + A P SP +V G
Sbjct: 21 WDDRHLSGEIKPADGGGGGAAARVERSRSAGHGGYRAAGRVQPALDPPSPRVAVCGFCRF 80
Query: 506 RGS*GTWGRTSASYRARCTDGCA-SRTH 426
G G GR+ A G A +R H
Sbjct: 81 FGGSGKGGRSGGGAAAAVAGGKAKARRH 108
>02_04_0178 +
20672705-20672919,20673385-20673486,20673925-20674002,
20674046-20674058
Length = 135
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = -3
Query: 302 STAAPRGSVSLTLCTTGCPLRLDRLSMRAQIHHSCTESSRGYCSPSQAGAFSLLIY*LSW 123
+T RG +L R++ RA SC S RG C P+ A + ++ +
Sbjct: 32 TTIGGRGLTQFPASAAAATAKLPRMASRATSCSSC--SGRGACLPNIYVASTSILEVEAV 89
Query: 122 HQNHHQLLYDQNQRKQQK 69
+++ Q D + RKQ+K
Sbjct: 90 DKHYQQQKQDVSSRKQRK 107
>12_01_0355 - 2704909-2705745
Length = 278
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 571 GREKRLLPRHVAAPTRDSVPPPRLSTGRPGEXDALVSQPSSEGQ 702
GREKR P APT + PPP S GR G+ +EG+
Sbjct: 167 GREKRGTP--TLAPTPPTFPPPIRSIGRGGKPCVCFRSFRAEGR 208
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -3
Query: 611 GAATWRGSNRFSRPLHTRYAWPASPSTSVSGPRSCRGS*GTWGRTSASYRARCTDGC 441
GA S+ P H+R PASP + GP S G G+ + S RC C
Sbjct: 124 GAPLCSSSSSALPPPHSRTP-PASPLAAARGPTSHAGETGSRREGARSSSGRCPPSC 179
>08_02_1077 - 24160545-24161936
Length = 463
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 425 RAFWRHSRLYIEPYMKQTSCPRCPKNLCKSEALRRWCSEMPARRIVYV 568
+ F+ H R++ + + C R + L ++E L W PAR +VYV
Sbjct: 230 KRFFGHGRVWAVGPVADSGC-RGEERLPEAEQLFSWLDTCPARSVVYV 276
>02_02_0477 + 10759726-10759787,10760008-10760096,10760460-10761406
Length = 365
Score = 29.5 bits (63), Expect = 2.9
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = +2
Query: 80 FFDFD--RTIVDDDSDATIINKLREKKPPPDWESSNHDWTPYMSDVFEHAYSAGLSEEDI 253
FF F+ R +VDD +D +I + E PP ESS D P F A+ ++E++
Sbjct: 78 FFHFELIRKLVDD-ADLSIFGAIFEFNPPSSKESS-ADNAPR----FVIAFRGTITEKET 131
Query: 254 LSCIASMKPNLGVQQLIRTLSQQGWEIVVITDANSVF--VNHWLTEHGL 394
+S ++ +L VQ + S+ + + + SVF N WL H L
Sbjct: 132 ISRDIALDLHL-VQNGLHRTSRFTIAMQAVQNVASVFPGSNIWLAGHSL 179
>11_01_0300 +
2253957-2254245,2254783-2254850,2254967-2255098,
2255811-2255969,2256124-2256489
Length = 337
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 234 PAEYACSNTSLMYGVQSWLLLSQSGGGFFSLNLLIIVASESSSTIVRSKSKKATEAI 64
P+E A N M G + W L S GG F+ +++I+ E + + S S+K +I
Sbjct: 82 PSEAAGDNGMQMSGHREWYAL--SAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSI 136
>11_01_0052 -
396822-396965,397332-397541,397686-397815,397956-398126,
398723-398827,398940-399613,399659-399688,399756-399932
Length = 546
Score = 29.1 bits (62), Expect = 3.9
Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Frame = -2
Query: 423 FVMTFVIYCNNPCSVSQ*LTKTLFASVMTTISQPCWDSVL-INCCTPRFGFIDAMHDRMS 247
F+MT + + CSV K + T+ +D + + CTP + D
Sbjct: 19 FLMTTSVADSTSCSVPDHSVKHSCLVFVATLRT--FDRLASLYKCTPFMFEGMVLDDPKM 76
Query: 246 SSLRPAEYACSNTSLMYGVQSWLLLSQSGGGFFSLNLLIIVASESSSTIVRSKSKKATEA 67
SS + ++++G++ W+++ S G LLI++ + T ++ + E
Sbjct: 77 SSNSTLTDSLHERTIVFGLKLWVVIGISVGASLLGVLLILIVCLTLQTWIKRSRRTFKEI 136
Query: 66 ILAKITSTPANLQEI 22
+ +I S +++E+
Sbjct: 137 PITQIPSASKDIKEV 151
>10_01_0171 +
1917520-1918056,1919201-1919336,1921873-1922060,
1922491-1922694,1923913-1924425
Length = 525
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 IVDDDSDATIINKLREKKPPPDWESSNHDWTPYMSDV-FEHAYSAGL 238
++ D ++ + +EK DW S D P+M D F HA G+
Sbjct: 11 LITDHANMKKQKRKKEKGNRSDWHGSTKDTIPFMGDADFNHADEFGV 57
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 512 SEALRRWCSEMPARRIVYVGDGRNDYCPATSLPPHATVFPRRG 640
+ AL+ ++ P R+ V V D ++ PAT +PP+ +FP G
Sbjct: 134 ARALQESLNDEPPRQNVPVKDVHSESTPATFMPPY--IFPSTG 174
>01_01_0681 +
5235623-5235873,5235958-5236285,5236786-5236935,
5237255-5237503,5238581-5238670,5238781-5238966,
5239477-5239598,5242915-5243011
Length = 490
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 533 CSEMPARRIVYVGDGRNDYCPATSLPPHATVFPRRGYPLDDLVXKTLSSPNPQ 691
CSE+ RR G G+ D A LPP + +P G L+ SP P+
Sbjct: 25 CSELLRRRRRGAGSGKGDAAAAARLPPGSFGWPVVGETLE--FVSCAYSPRPE 75
>02_04_0226 + 21073967-21074179,21074711-21074832,21074926-21075370,
21075453-21075559,21075656-21076463,21076691-21077128,
21077349-21077537,21077616-21077843,21077943-21078140,
21078304-21078379,21078452-21078593,21078749-21079238
Length = 1151
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 364 EDTIRVCDDHNLPALLGQRPDQLL 293
+ TI V DD LP GQR DQL+
Sbjct: 935 QSTIPVSDDTGLPECTGQRLDQLI 958
>11_03_0006 + 8878611-8878724,8879323-8879706
Length = 165
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -3
Query: 635 GGGTLSRVGAATWRGSNRFSRPLHTRYAWPASPSTSVSGP 516
GGGT + RG R PLH RYA P P + + P
Sbjct: 85 GGGTEELAVLVSGRGGVRARTPLH-RYAAPRVPEPAGAAP 123
>08_01_0216 -
1717696-1718265,1718856-1720082,1720558-1720627,
1721579-1721602,1722073-1722140
Length = 652
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -3
Query: 677 TRASXSP---GRPVDSRGGGTLSRVGAATWRGSNRFSRPLHTRYAW 549
TR+ P G PV GG S G+ W G + +RP H+ W
Sbjct: 181 TRSCTDPDLFGWPVVQYGGPMQSPGGSVLWNGISTGARPRHSSPDW 226
>06_02_0315 - 14230234-14232771
Length = 845
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +1
Query: 499 EPLQERGPETLVLGDAGQA---YRVCRGREKRLLPRHVAAPTRDSVPPPRLS---TGR 654
+PL+ ET GD G+ Y CR E+++ P +DSV LS TGR
Sbjct: 415 DPLETEAVETSECGDLGEEASEYGDCREDEEKIEPEEAPIVRKDSVLEVALSGEATGR 472
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,448,290
Number of Sequences: 37544
Number of extensions: 580642
Number of successful extensions: 2272
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2263
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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