Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K17
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 31 1.1
Z92777-11|CAB07168.2| 338|Caenorhabditis elegans Hypothetical p... 29 2.6
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 29 2.6
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 29 3.4
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 29 3.4
AF098992-7|AAC67455.2| 224|Caenorhabditis elegans Hypothetical ... 29 4.5
>Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical
protein F59F4.3 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -1
Query: 460 LDVQTAVPPERTICDDIRYILQQPVLRQPMIDEDTIRVCDDHNLPALLGQRPDQLLHPE 284
LD + +P RTI D + PV P ID+D D+HN RP + P+
Sbjct: 140 LDAEAPIPL-RTINADKSRSIPPPVAEVPEIDDDDAEENDEHNTTETTPLRPPRPSRPK 197
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 94 IKIKESNRSHFSKNHKHTRQPSRNNSSA 11
I K NRSH S N H R+P+++ S+A
Sbjct: 691 IPCKIDNRSHNSNNRSHIRRPAQSRSTA 718
>Z92777-11|CAB07168.2| 338|Caenorhabditis elegans Hypothetical
protein C17H1.4 protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 266 ASMKPNLGVQQLIRTLSQQGWEIVVITDANSVFVNHWLTEHGLLQYI 406
A +K N+G+ + I T +IV + ++ SVF+N+ +T+H +++ I
Sbjct: 282 AELKSNIGLCEYIATKISS--KIVKLQESCSVFLNYDITDHTMVEAI 326
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 288 PRFGFIDAMHDRMSSSLRPAEYACSNTSLMYGVQS 184
P G+ D D R + Y CSNTS GVQS
Sbjct: 506 PNEGYDDMSSDEDVQPCRGSPYRCSNTSSSSGVQS 540
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 288 PRFGFIDAMHDRMSSSLRPAEYACSNTSLMYGVQS 184
P G+ D D R + Y CSNTS GVQS
Sbjct: 506 PNEGYDDMSSDEDVQPCRGSPYRCSNTSSSSGVQS 540
>Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical
protein F33E2.2c protein.
Length = 577
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 288 PRFGFIDAMHDRMSSSLRPAEYACSNTSLMYGVQS 184
P G+ D D R + Y CSNTS GVQS
Sbjct: 506 PNEGYDDMSSDEDVQPCRGSPYRCSNTSSSSGVQS 540
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 288 PRFGFIDAMHDRMSSSLRPAEYACSNTSLMYGVQS 184
P G+ D D R + Y CSNTS GVQS
Sbjct: 506 PNEGYDDMSSDEDVQPCRGSPYRCSNTSSSSGVQS 540
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 288 PRFGFIDAMHDRMSSSLRPAEYACSNTSLMYGVQS 184
P G+ D D R + Y CSNTS GVQS
Sbjct: 506 PNEGYDDMSSDEDVQPCRGSPYRCSNTSSSSGVQS 540
>Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical
protein F01G10.7 protein.
Length = 409
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 348 SVMTTISQPCWDSVLINCCTPRFGFIDAMHDRMSSSLRPAEYACSN--TSLMYGVQSWLL 175
+V IS C + N CT GFID +++M + R Y C + + +Q W+
Sbjct: 234 TVQKMISYMCSRFFMQNICTLDIGFIDG-NEKMFNQSRVGVYLCHTPAATSVKDLQHWIQ 292
Query: 174 LSQS 163
L +S
Sbjct: 293 LVKS 296
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 500 NLCKSEALRRWCSEMPARRIVYVGDGRNDYCPATSLPPHATV 625
NL +SE R+ P R VG N CP+ SLP + V
Sbjct: 946 NLSESETCRKSFLGAPKRYCSSVGQYANPSCPSQSLPAYLIV 987
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 500 NLCKSEALRRWCSEMPARRIVYVGDGRNDYCPATSLPPHATV 625
NL +SE R+ P R VG N CP+ SLP + V
Sbjct: 555 NLSESETCRKSFLGAPKRYCSSVGQYANPSCPSQSLPAYLIV 596
>AF098992-7|AAC67455.2| 224|Caenorhabditis elegans Hypothetical
protein F53C3.4 protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = -2
Query: 249 SSSLRPA--EYACSNTSLMYGVQSWLLLSQSGGGFFSLNLLIIVASESSSTIVRSKSKKA 76
++ RPA + C+ + G++ LSQ G F + + + V + T++ K KK
Sbjct: 116 ANGTRPAIITFGCAEYTYCCGLECCTGLSQLEEGLFLIGVSLAVLFLAVITVLLDKCKKR 175
Query: 75 TEAILAKITSTPANLQEIT 19
T STP +QE+T
Sbjct: 176 TTKRFNLPRSTP-EVQELT 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,244,386
Number of Sequences: 27780
Number of extensions: 419742
Number of successful extensions: 1480
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -