Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K17
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.74 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   1.7  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   3.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   4.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   4.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.1  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 338 PQSPSPVGTAS*STAA-PRGSVSLTLCTTGCPLRLDRLSM 222
           P+  S   T+S ST+  P  S + TL  +GCP  +  L +
Sbjct: 827 PRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMELQV 866


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 566 VGDGRNDYCPATSLPPHATVFPRRGYPLDDL 658
           VGD     C  T  PP   V+ R G  L+ L
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVWRRNGADLETL 354


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 146 LLIY*LSWHQNHHQLLYDQN 87
           L IY    H +HHQ+LY Q+
Sbjct: 67  LPIYQSHHHLHHHQVLYQQS 86


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 470 KQTSCPRCPKNLCKSEALRRWCSEMPARR 556
           K  +C  C K LC   +L+R  ++  A R
Sbjct: 4   KLFTCQLCGKVLCSKASLKRHVADKHAER 32


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -2

Query: 309 VLINCCTPRFGFIDAMHDRMSSSLRPAEYACSNTSLMY 196
           V+ N   PRF       D  +S     EY+C    L++
Sbjct: 200 VVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLF 237


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -2

Query: 309 VLINCCTPRFGFIDAMHDRMSSSLRPAEYACSNTSLMY 196
           V+ N   PRF       D  +S     EY+C    L++
Sbjct: 200 VVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKVDLLF 237


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 591 APPRRCPHTRQCSPAAAIH 647
           APP + P     SPA+ IH
Sbjct: 54  APPSQNPSQMMISPASGIH 72


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -2

Query: 270 DAMHDRMSSSLRPAEYACSNTSLMYGVQSWLLLSQSGGGFFSLNLLIIVASESSSTIVRS 91
           D +++R+  S   +E     +S  YG    LLL +        N+L++V+    S +V+ 
Sbjct: 573 DVLYNRLVVSEDGSE-TFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQI 631

Query: 90  KS 85
            S
Sbjct: 632 DS 633


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -2

Query: 270 DAMHDRMSSSLRPAEYACSNTSLMYGVQSWLLLSQSGGGFFSLNLLIIVASESSSTIVRS 91
           D +++R+  S   +E     +S  YG    LLL +        N+L++V+    S +V+ 
Sbjct: 573 DVLYNRLVVSEDGSE-TFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQI 631

Query: 90  KS 85
            S
Sbjct: 632 DS 633


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,556
Number of Sequences: 438
Number of extensions: 5281
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)