Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K16
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    30   1.9  

>Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical
           protein ZK632.9 protein.
          Length = 62

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 185 GGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 298
           G  +RTK +  EH +   P G +RK+V    N E  +K
Sbjct: 23  GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 116 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 292
           S+ F D + D  +     H+ +   G+   KKE+ + T+  +PS       T+  N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198

Query: 293 KKTSNTKH*MD 325
            K    K  +D
Sbjct: 199 DKEKTDKEKLD 209


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 116 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 292
           S+ F D + D  +     H+ +   G+   KKE+ + T+  +PS       T+  N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198

Query: 293 KKTSNTKH*MD 325
            K    K  +D
Sbjct: 199 DKEKTDKEKLD 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,969,155
Number of Sequences: 27780
Number of extensions: 330826
Number of successful extensions: 954
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)