Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K14
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpa...    45   7e-05
AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z46787-8|CAA86746.1|  253|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpase
           protein 10 protein.
          Length = 126

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +2

Query: 74  MASQTQGIQQLLAAEKRAAEKVS 142
           MASQTQGIQQLLAAEKRAAEK++
Sbjct: 1   MASQTQGIQQLLAAEKRAAEKIN 23



 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = +3

Query: 279 VAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINYRL 422
           + +KI  +T+ +I  M + V   K+AVI  +L LV DIKPELH N  L
Sbjct: 69  IESKIRRDTEDQISGMKQSVAGNKQAVIVRLLQLVCDIKPELHHNLTL 116


>AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.11 protein.
          Length = 788

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/92 (21%), Positives = 47/92 (51%)
 Frame = +3

Query: 84  RPKESNSF*LLKNALRRKSARQGSEKQNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTW 263
           + K +  F   +  LRR++ +  ++K++  +  +   KM  +  + ++    + LK S+ 
Sbjct: 152 KAKLTEHFKEAETQLRRENVKLEAQKEDILNHTKNSEKMWNERLE-NITADFERLKSSSK 210

Query: 264 VPGXGVAAKIDAETKVKIEEMNKMVQTQKEAV 359
             G     K+  E ++KI+E+N+ ++   EA+
Sbjct: 211 PSGIRADQKMFQENEMKIQELNRKLKDALEAI 242


>Z46787-8|CAA86746.1|  253|Caenorhabditis elegans Hypothetical
           protein C16C10.8 protein.
          Length = 253

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +3

Query: 180 PRRRLKMKLKSTDRSVKGSSKNLKPSTWVPGXGVAAKIDAETKVKIEEMNKMVQTQKEA 356
           PR+  K  +     S +   KNL    W      A K+  E   K EE  KM + QKEA
Sbjct: 106 PRKEAKF-INFLTNSCRLRDKNLALRAWQAIAAEADKMREEAIRKQEETQKMEKAQKEA 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,970,293
Number of Sequences: 27780
Number of extensions: 271793
Number of successful extensions: 689
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)