Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K07
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032126-1|AAH32126.1| 289|Homo sapiens ATP synthase mitochondr... 155 1e-37
BC004114-1|AAH04114.1| 289|Homo sapiens ATP synthase mitochondr... 155 1e-37
AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens ... 35 0.33
X89109-1|CAA61482.1| 461|Homo sapiens coronin homologue protein. 31 5.3
D44497-1|BAA07940.1| 461|Homo sapiens human p57 protein. 31 5.3
BC126387-1|AAI26388.1| 461|Homo sapiens coronin, actin binding ... 31 5.3
BC126385-1|AAI26386.1| 461|Homo sapiens coronin, actin binding ... 31 5.3
BC110374-1|AAI10375.1| 461|Homo sapiens coronin, actin binding ... 31 5.3
AF495470-1|AAM18516.1| 461|Homo sapiens tryptophane aspartate-c... 31 5.3
U34690-1|AAA77058.1| 461|Homo sapiens coronin-like protein prot... 30 9.3
AK123401-1|BAC85606.1| 193|Homo sapiens protein ( Homo sapiens ... 30 9.3
AB209221-1|BAD92458.1| 558|Homo sapiens Hypothetical protein FL... 30 9.3
>BC032126-1|AAH32126.1| 289|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 2 protein.
Length = 289
Score = 155 bits (377), Expect = 1e-37
Identities = 75/193 (38%), Positives = 108/193 (55%)
Frame = +3
Query: 273 YRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVEWDSQNE 452
Y P RKRFY+ ++ Q + +E+ LDHR+LKTP + TV +E LA AVA EWDSQ +
Sbjct: 40 YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99
Query: 453 TISQATMHLTALCNTALDNPGKLTSHDIVNYLLEHYPTDTLLFYSXXXXXXXXXXXXKWT 632
TI TMHLT LCNT+LDNP + ++ ++ TDT+ + +W
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWD 159
Query: 633 PILDWFQKTFNVKQELANSIQPPPVFTETRAVLARHFLSYDFAALTAINFGVEALKSPIL 812
PI++W +K + V+ + SI P + +TR VL H SY+ AL I F LKS +L
Sbjct: 160 PIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVL 219
Query: 813 MLACMERRVVPEE 851
L ++ R+ E+
Sbjct: 220 TLGLIDLRLTVEQ 232
>BC004114-1|AAH04114.1| 289|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 2 protein.
Length = 289
Score = 155 bits (377), Expect = 1e-37
Identities = 75/193 (38%), Positives = 108/193 (55%)
Frame = +3
Query: 273 YRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVEWDSQNE 452
Y P RKRFY+ ++ Q + +E+ LDHR+LKTP + TV +E LA AVA EWDSQ +
Sbjct: 40 YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99
Query: 453 TISQATMHLTALCNTALDNPGKLTSHDIVNYLLEHYPTDTLLFYSXXXXXXXXXXXXKWT 632
TI TMHLT LCNT+LDNP + ++ ++ TDT+ + +W
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWD 159
Query: 633 PILDWFQKTFNVKQELANSIQPPPVFTETRAVLARHFLSYDFAALTAINFGVEALKSPIL 812
PI++W +K + V+ + SI P + +TR VL H SY+ AL I F LKS +L
Sbjct: 160 PIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVL 219
Query: 813 MLACMERRVVPEE 851
L ++ R+ E+
Sbjct: 220 TLGLIDLRLTVEQ 232
>AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46412 fis, clone THYMU3011534. ).
Length = 909
Score = 35.1 bits (77), Expect = 0.33
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 339 WEVTLDHRRLKTPNGNVLTVGNEPLARAVAVEWDSQNETI--SQATMHLTALCNTALDN 509
W LD+R L P ++LTV ++ +VA++ S I +A +HL+ CNT N
Sbjct: 74 WSCALDYRPLYLPIRSLLTVETFSVSSSVALDKSSSTLRIILDEAALHLSDKCNTVTIN 132
>X89109-1|CAA61482.1| 461|Homo sapiens coronin homologue protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>D44497-1|BAA07940.1| 461|Homo sapiens human p57 protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>BC126387-1|AAI26388.1| 461|Homo sapiens coronin, actin binding
protein, 1A protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>BC126385-1|AAI26386.1| 461|Homo sapiens coronin, actin binding
protein, 1A protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>BC110374-1|AAI10375.1| 461|Homo sapiens coronin, actin binding
protein, 1A protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>AF495470-1|AAM18516.1| 461|Homo sapiens tryptophane
aspartate-containing coat protein protein.
Length = 461
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>U34690-1|AAA77058.1| 461|Homo sapiens coronin-like protein
protein.
Length = 461
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSEWQVAL 249
Query: 435 WDSQN 449
WD+++
Sbjct: 250 WDTKH 254
>AK123401-1|BAC85606.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ41407 fis, clone BRHIP2000819, moderately
similar to Human mRNA for actin binding protein p57. ).
Length = 193
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 36 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 93
Query: 435 WDS 443
WD+
Sbjct: 94 WDT 96
>AB209221-1|BAD92458.1| 558|Homo sapiens Hypothetical protein
FLJ41407 variant protein.
Length = 558
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 255 CTLCSIYRPYATRKRFYKGTAVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVE 434
CT C R R KGT V + D E T R + G +LT G ++
Sbjct: 248 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 305
Query: 435 WDS 443
WD+
Sbjct: 306 WDT 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,942,175
Number of Sequences: 237096
Number of extensions: 2397505
Number of successful extensions: 8196
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8190
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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