Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K06
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 36 0.037
11_01_0545 + 4308167-4308496 32 0.46
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 32 0.46
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 31 1.1
02_02_0183 + 7576901-7576908,7577666-7578176 31 1.1
12_02_0010 - 12275652-12276221,12276804-12276935 30 1.9
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 29 2.4
04_03_1017 + 21747044-21748051 29 3.2
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 29 3.2
02_05_1008 - 33461225-33462334 29 3.2
01_05_0602 + 23577328-23579805 29 3.2
04_03_0969 + 21331989-21332674,21333090-21333194,21333269-213333... 28 5.6
05_06_0290 - 26961926-26962423 28 7.5
02_03_0317 - 17659356-17659634,17660028-17660552,17660587-176606... 28 7.5
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 28 7.5
12_02_0661 + 21644328-21644517,21644697-21644875,21644899-216459... 27 9.9
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 27 9.9
08_02_0480 + 17632176-17632814,17633838-17633906 27 9.9
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 27 9.9
06_01_0553 + 3942907-3943617 27 9.9
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 285 PRRHRKPPTL*KTRSRRRASLLVE-PRNPPTMLLAQLPMQSTPQSTPSTRNFRRCRLQQE 461
PRRHR P + R RR A+ + P PP + P +TP T N R + E
Sbjct: 13 PRRHRHGPATPRRRRRRHAAAVATPPPPPPRRRANRCPDAATPPLTNENENDRTNESENE 72
Query: 462 RLRT 473
RT
Sbjct: 73 NDRT 76
>11_01_0545 + 4308167-4308496
Length = 109
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 268 CRATCRREGTGSRPRCRRPGQEGGRAYWWSREIRQRCC 381
C + TG RCR G G A W S++I+ CC
Sbjct: 61 CIPVAACDDTGCAIRCRDLGYNPGSACWTSKDIKLYCC 98
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 31.9 bits (69), Expect = 0.46
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 201 ESQAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPRNPPTML 380
E++A A ARR SS+ S PP RKPP + ++R L P N P
Sbjct: 10 EAEADLQALARRFSFSSSSSPS-PSPSPPSSSRKPPLPPRRSPQKRPGLPTIPENGPPAG 68
Query: 381 LAQLPMQSTPQSTPST 428
+A TP++
Sbjct: 69 MATATATPKRTRTPTS 84
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 255 GRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTP 410
G S+LP RR R+PP RRR +P +PP LP ++P
Sbjct: 10 GTSSSSSSLPSRRRRRPP---PRLGRRRGGDDQQPPHPPKASSEALPCAASP 58
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 271 RATCRREGTGSRPRCRRPGQEGGRAYWWSREIRQRC 378
R R+ G G R R RR G GG A W R+ RC
Sbjct: 47 RRPARQRGGGGRRRRRRCGGGGGGAARWIRQPLARC 82
>12_02_0010 - 12275652-12276221,12276804-12276935
Length = 233
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Frame = +3
Query: 186 QKCSAESQAHFVASARRLHLSSTGRRRMQSNLPPRRH---RKP--PTL*KTRSRRRASLL 350
QK AH + + H+ S RR+ S L P+ R P L T A+
Sbjct: 43 QKVCRCQPAHTLGPPLKRHIRSKSGRRVSSQLQPKEKEAVRSPCDVILQCTTVGYSAADK 102
Query: 351 VEPRNPPTMLLAQLPMQSTPQSTPST 428
PR P T LLA S+P S T
Sbjct: 103 AAPRRPTTSLLALATAASSPSSAEVT 128
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 520 CSVKDLLPISYGFVGGVRSLSCCKRHLRKFLVDGVDCGVLCI 395
C L+PI+ FV R C K+ LR+ + GVD +LC+
Sbjct: 818 CQCLSLMPIASLFVVSFR---CGKQRLREARIQGVDYLILCL 856
>04_03_1017 + 21747044-21748051
Length = 335
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/86 (31%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Frame = +3
Query: 282 PPRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQST-------PQSTPSTRNFR 440
PPRR P T RR AS P +PP + Q T P TPST
Sbjct: 212 PPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPSTPPPP 271
Query: 441 RCRLQQERLRTPPTKP*LMGRRSLTL 518
R TPP+ P S T+
Sbjct: 272 RAASPDYTPSTPPSSPLPSAAESFTV 297
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/84 (32%), Positives = 35/84 (41%)
Frame = +3
Query: 222 ASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQ 401
A R ST R + P RR PPT RSR R+ P PP Q P
Sbjct: 30 ARTPRAPFPSTSRSSNPYSFPDRR--PPPT---PRSRSRS-----PLPPPEQQKQQQPPP 79
Query: 402 STPQSTPSTRNFRRCRLQQERLRT 473
+TP P R+ R +++ +RT
Sbjct: 80 TTPPPAPRRRDPRYAGVRRGDVRT 103
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 GRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVE-PRNPPTMLLAQLPMQSTPQSTPST 428
G +++ L ++ ++P T RSRRR L + P+ T L LP+ P S PS+
Sbjct: 5 GPPSLRAGLQQQQQQQPGT--PGRSRRRPDLTLPLPQRDLTSLAVPLPLPLPPSSAPSS 61
>01_05_0602 + 23577328-23579805
Length = 825
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 273 SNLP-PRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQSTPSTRNFRRCR 449
++LP P H +P +RS RR + P PP L ++L +PS R+ R R
Sbjct: 2 ASLPLPALHHEPLL---SRSHRR----LPPSPPPPPLPSRLAAAHPSAPSPSPRDDERLR 54
Query: 450 LQQERLRT 473
L+ E LR+
Sbjct: 55 LRAEELRS 62
>04_03_0969 +
21331989-21332674,21333090-21333194,21333269-21333391,
21333458-21333628,21333710-21333839,21333926-21334135,
21334700-21334855
Length = 526
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 282 PPRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQSTPSTRNFRRCRLQ-Q 458
PP+ KPP + R A+ P+ P ++ P Q P + + R+ +
Sbjct: 68 PPKHPGKPPKDIQEVPSRAAAAAAAPKAQPAQVIQAPPPQPPPSESIQIETGKEHRITFR 127
Query: 459 ERLRTPPTKP 488
E+ PP P
Sbjct: 128 EQQHQPPQPP 137
>05_06_0290 - 26961926-26962423
Length = 165
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +3
Query: 180 KTQKCSAESQAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEP 359
+T K S E++ + RR + + + PR H + P L RRRA + P
Sbjct: 18 ETHKKSPEAEMENLVHGRRWRNHEQLPQEITARNAPREHTQSPHLSLPGPRRRARTSIPP 77
Query: 360 RNP 368
+P
Sbjct: 78 TDP 80
>02_03_0317 -
17659356-17659634,17660028-17660552,17660587-17660661,
17661699-17662496
Length = 558
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 174 INKTQKCSAESQAHFVASARRLHLSSTGRRRMQSNL 281
I K K +A S A A++RRLHL R+ S+L
Sbjct: 51 IRKQAKDAAASAAALAAASRRLHLDRARHLRLLSSL 86
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 285 PRRHRKPPTL*KTRSRRRASLLVEPRN-PPTMLLAQLPMQSTPQSTPS 425
P R K L +TRSRRR +L P PP +++ + P P P+
Sbjct: 2 PHRTSKMRRLPRTRSRRRTALHRRPPPLPPAIIIHKDPPPPPPPRQPA 49
>12_02_0661 +
21644328-21644517,21644697-21644875,21644899-21645922,
21647108-21647262
Length = 515
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 33 NLVRYFDRRISTAVSSAVRSRYC*SIEKF 119
N + YF R +S +++A+ RY S+ F
Sbjct: 64 NAIEYFKRGLSPKIATAIEGRYARSVRGF 92
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 232 EDCISLRQ--EEEGCRATCRREGTGSRPRCRRPGQEGGRAYWWSREIRQRCC*LSC 393
E +SLR E G + CRRE SR +PG G R+ S E+ R SC
Sbjct: 456 ERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGERSAAASAEMSSRGGSKSC 511
>08_02_0480 + 17632176-17632814,17633838-17633906
Length = 235
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 244 SLRQEEEGCRATCRREGTGSRPRCRRPGQEGG 339
SLR +G + C G G+RP RRP + GG
Sbjct: 69 SLRLTAQG-QGDCPALGGGNRPNPRRPARPGG 99
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 512 QGPSSHQLRLCWRRPQPLLLQATPS 438
+G H CWR PL+ +A PS
Sbjct: 427 KGSIEHSYPFCWRSGTPLIYRAVPS 451
>06_01_0553 + 3942907-3943617
Length = 236
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 330 RRRASLLVEPRNPPTMLLAQLPMQSTPQSTPSTRN 434
R RA++ V PR PP L + P P +TRN
Sbjct: 108 RDRAAVAVAPRPPPPPQLWKPPRARAPPPPSATRN 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,217,325
Number of Sequences: 37544
Number of extensions: 292055
Number of successful extensions: 1081
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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