Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K05
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7JX57 Cluster: UPF0466 protein CG17680, mitochondrial ...    78   2e-13
UniRef50_Q7QHP6 Cluster: ENSANGP00000015670; n=3; Endopterygota|...    73   8e-12
UniRef50_UPI0000568890 Cluster: PREDICTED: hypothetical protein;...    64   4e-09
UniRef50_Q9H4I9 Cluster: UPF0466 protein C22orf32, mitochondrial...    58   2e-07
UniRef50_Q9U3I4 Cluster: Putative uncharacterized protein tag-29...    41   0.029
UniRef50_UPI0000F2D7E5 Cluster: PREDICTED: hypothetical protein;...    41   0.038
UniRef50_Q5BQX3 Cluster: SJCHGC09773 protein; n=1; Schistosoma j...    38   0.35 
UniRef50_Q8UZB6 Cluster: Replicase; n=5; Grapevine fleck virus|R...    37   0.46 
UniRef50_Q5YWQ1 Cluster: Putative uncharacterized protein; n=6; ...    34   3.3  
UniRef50_UPI00006CC822 Cluster: cyclic nucleotide-binding domain...    33   5.7  
UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454; ...    33   7.6  

>UniRef50_Q7JX57 Cluster: UPF0466 protein CG17680, mitochondrial
           precursor; n=2; Sophophora|Rep: UPF0466 protein CG17680,
           mitochondrial precursor - Drosophila melanogaster (Fruit
           fly)
          Length = 97

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 41/81 (50%), Positives = 56/81 (69%)
 Frame = +3

Query: 87  LALFXLTRLVAQSKPLTXHAPIIHLSTATTTPTGAILPEPQKQPFGLLCVVFAVVPGLLI 266
           LAL  ++R VA+  P        H+S+     +GAI P+P++ PFGLL +  AV+PGL +
Sbjct: 12  LALQRVSRRVAEH-PHNLRILQRHMSSVYFR-SGAIKPKPEEMPFGLLAIFCAVIPGLFV 69

Query: 267 GAAISKNIANFLEENELFVPS 329
           GA ISKN+ANFLEEN+LFVP+
Sbjct: 70  GATISKNVANFLEENDLFVPA 90


>UniRef50_Q7QHP6 Cluster: ENSANGP00000015670; n=3;
           Endopterygota|Rep: ENSANGP00000015670 - Anopheles
           gambiae str. PEST
          Length = 98

 Score = 72.9 bits (171), Expect = 8e-12
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +3

Query: 174 TTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVPS 329
           T  +GA+ P P+  PFGL  ++  V+PGLLIGA ISKN+ANFLEEN+LFVPS
Sbjct: 40  TYRSGALKPMPEITPFGLFGIIATVIPGLLIGATISKNMANFLEENDLFVPS 91


>UniRef50_UPI0000568890 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 99

 Score = 64.1 bits (149), Expect = 4e-09
 Identities = 32/70 (45%), Positives = 42/70 (60%)
 Frame = +3

Query: 117 AQSKPLTXHAPIIHLSTATTTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIAN 296
           A  K +    P +   TA ++ TG +LP+P K PFGL  +   VVP L +G  ISKN A 
Sbjct: 24  ANQKSVNVTGPTLS-RTAVSSTTGRVLPKPDKVPFGLTRMTIVVVPFLYVGTLISKNFAA 82

Query: 297 FLEENELFVP 326
            LEE+E+FVP
Sbjct: 83  LLEEHEIFVP 92


>UniRef50_Q9H4I9 Cluster: UPF0466 protein C22orf32, mitochondrial
           precursor; n=19; Euteleostomi|Rep: UPF0466 protein
           C22orf32, mitochondrial precursor - Homo sapiens (Human)
          Length = 107

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = +3

Query: 177 TPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 326
           T +GAILP+P K  FGLL V   V+P L +G  ISKN A  LEE+++FVP
Sbjct: 51  TRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVP 100


>UniRef50_Q9U3I4 Cluster: Putative uncharacterized protein tag-299;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein tag-299 - Caenorhabditis elegans
          Length = 90

 Score = 41.1 bits (92), Expect = 0.029
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +3

Query: 171 TTTPTGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVPS 329
           T T  G +   P     G+L ++F     L IG  I+   A++LEENE+FVP+
Sbjct: 32  TATAPGGVGQRPFTNKAGVLKLIFVSASSLYIGGLIAHKGASYLEENEIFVPT 84


>UniRef50_UPI0000F2D7E5 Cluster: PREDICTED: hypothetical protein;
           n=2; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 103

 Score = 40.7 bits (91), Expect = 0.038
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +3

Query: 183 TGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 326
           +GAI P P + PFGLL V F V      G  IS++IA+ L+   +F P
Sbjct: 48  SGAIRPRPTQMPFGLLRVFFVVFTFSCFGTLISQHIASLLKYFNVFDP 95


>UniRef50_Q5BQX3 Cluster: SJCHGC09773 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09773 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 76

 Score = 37.5 bits (83), Expect = 0.35
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +3

Query: 183 TGAILPEPQKQPFGLLCVVFAVVPGLLIGAAISKNIANFLEENELFVP 326
           +GA    PQ   FG+L  +   +P + IG+ IS+  A  LEE ++F P
Sbjct: 26  SGAFCDRPQIMRFGILRSLAVGIPFIFIGSMISRTGAELLEEYDIFTP 73


>UniRef50_Q8UZB6 Cluster: Replicase; n=5; Grapevine fleck virus|Rep:
            Replicase - Grapevine fleck virus
          Length = 1949

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +3

Query: 72   VLFXQLALFXLTRLVAQSKPLTXHAPIIHLSTATTTPTGAILPEPQKQPFGLLCVVFAVV 251
            +L+ Q  L     LV+    L    P ++ S     P  A+ P+P+  PFGL C  F   
Sbjct: 1757 ILYTQYLLHRTPVLVSGDDSLVDRVPPMNPSWPALAPLFALKPKPETSPFGLFCGYFVGP 1816

Query: 252  PGLL-IGAAISKNIANFLEENEL 317
             G +    A+   +A  LE+  L
Sbjct: 1817 AGAVRAPRALFAKLAIALEDGSL 1839


>UniRef50_Q5YWQ1 Cluster: Putative uncharacterized protein; n=6;
           Corynebacterineae|Rep: Putative uncharacterized protein
           - Nocardia farcinica
          Length = 299

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 292 AMFLLIAAPISKPGTTAKTTHSKPKGCFCG 203
           A  L+  AP   PG TA   H+ P GCF G
Sbjct: 28  AAILMPGAPTPLPGVTAPAAHAAPAGCFAG 57


>UniRef50_UPI00006CC822 Cluster: cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 917

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 23/67 (34%), Positives = 39/67 (58%)
 Frame = -2

Query: 644 QINFKHYLN*NKKKMITRTFNLQNKELYILTVSQIKSI*K*KNCLTLYKYRMITFGKFYL 465
           Q+N+K+ LN NKK+MI++    Q+ +  ++ + +   +   KN   L KY+     K +L
Sbjct: 774 QVNYKNMLNDNKKEMISKYEKKQDIQTQLVDMMRSSVVQDTKN---LVKYK-----KQFL 825

Query: 464 NLGQKRR 444
           N+ QKRR
Sbjct: 826 NILQKRR 832


>UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454;
           n=1; Mycoplasma synoviae 53|Rep: hypothetical protein
           MS53_0454 - Mycoplasma synoviae 53
          Length = 208

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 128 AFNXTRTDYTSKHCNYYSNWCYFTRTTKTTFWFAVCCFCC 247
           +FN     + S +C   S +C+F+ + +  F+F  C FCC
Sbjct: 81  SFNFFNFYFFSSYCFSSSCFCWFSFSCRFNFFFNYCFFCC 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,325,774
Number of Sequences: 1657284
Number of extensions: 11325518
Number of successful extensions: 27846
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27824
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)