Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K03
(768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1037 - 21901989-21902468,21903308-21903526,21903984-219041... 71 1e-12
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 32 0.58
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 30 2.3
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911... 29 5.4
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 29 5.4
04_01_0623 - 8198301-8198504,8198805-8198907,8199065-8199144,819... 29 5.4
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 28 7.1
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 28 7.1
03_02_0509 - 9003330-9003446,9003587-9003673,9004113-9004280,900... 28 9.4
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 28 9.4
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 28 9.4
>04_03_1037 -
21901989-21902468,21903308-21903526,21903984-21904106,
21904225-21904392
Length = 329
Score = 70.9 bits (166), Expect = 1e-12
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Frame = +1
Query: 328 LLRPSDNINRQAKIS--QEKALLEDPTVYQYDEIYDXXXXXXXXXXXXXXXXXX--YIEN 495
+LR S Q K+ Q+KA+ EDP+V+ YDE+YD YI
Sbjct: 44 ILRQSYKKRSQQKVEEQQKKAMEEDPSVFAYDEVYDDMKQKAALPKMQDRVVRESKYIAA 103
Query: 496 LIKTANKRKLENERRVERQIQKEREKEGDEFKDKEVFVTSAYXXXXXXXXXXXXXXXXXX 675
L + A +RK E + ER++QKER KE + DK+ FVTSAY
Sbjct: 104 LKEKAEQRKREQDIIYERKLQKERSKEDHLYGDKDKFVTSAYRKKLEEERKWLEEEKRRQ 163
Query: 676 XXXSIGDVTKQHDLGGFY 729
DVTK+ DL FY
Sbjct: 164 LQEEKEDVTKKKDLSDFY 181
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 490 ENLIKTANKRKLENERRVERQIQKEREKEGDE 585
+ L + A K+K E ERR+ER+ +KER + G E
Sbjct: 188 QELRERARKKKEEEERRMEREREKERIRIGKE 219
>10_08_0106 +
14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE++ D+ +D++
Sbjct: 778 ERERERERERERERERERERDRDQNRDRD 806
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 511 NKRKLENERRVERQIQKEREKEGDEFKDKE 600
+ R+ E ER ER+ ++ERE+E + +D++
Sbjct: 771 HSRERERERERERERERERERERERERDRD 800
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 508 ANKRKLENERRVERQIQKEREKEGDEFKDK 597
+ +R+ E ER ER+ ++ERE+E + +D+
Sbjct: 772 SRERERERERERERERERERERERERDRDQ 801
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E D ++++
Sbjct: 776 ERERERERERERERERERERERDRDQNRD 804
>11_04_0442 -
17790811-17790889,17791047-17791114,17791144-17791166,
17791210-17795913,17797414-17797624,17798478-17798666
Length = 1757
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -2
Query: 242 CLPPFSGTIKPYFFDAISALSIFGIHSNNILFNSVYVFFIYYE 114
C P G +KP F+D +S G+ N+ + Y+ +++
Sbjct: 445 CKPAVVGRLKPDFWDILSKAQKSGVDLKNLSTHGTYILSSHFD 487
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -2
Query: 275 LRDAWNLSVLSCLPPFSGTIKPYFFDAISALSIFG-IHSNNILFNSVYVFFIYYEF-TVT 102
L + WN+ + C G I F+D I I G N LF YV YY TVT
Sbjct: 36 LMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVT 95
>04_01_0623 -
8198301-8198504,8198805-8198907,8199065-8199144,
8199239-8199321,8199593-8199641,8199736-8199801,
8200118-8200167,8200299-8200423,8200568-8200683
Length = 291
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 343 DNINRQAKISQEKALLEDPTVYQYDEIY 426
+N K+ +KAL+EDPT +Y E+Y
Sbjct: 195 ENSEGLLKLPTDKALVEDPTFRRYVELY 222
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 502 KTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
K +R+LE ER +E+Q KERE++ E KE
Sbjct: 518 KKREQRRLEKERELEQQ--KERERQAMERATKE 548
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -2
Query: 275 LRDAWNLSVLSCLPPFSGTIKPYFFDAISALSIFG-IHSNNILFNSVYVFFIYY 117
L + WN+ + C G I F+D I I G N LF YV YY
Sbjct: 37 LMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYY 90
>03_02_0509 -
9003330-9003446,9003587-9003673,9004113-9004280,
9004835-9004957,9005081-9005170,9005275-9005295
Length = 201
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDE 585
++K E R+ ++IQK+REK+G E
Sbjct: 131 QQKKAEESRIAQEIQKKREKDGRE 154
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 517 RKLENERRVERQIQKEREKEGDEFKDKE 600
R+ + +R +R+ ++ER+KE D +D+E
Sbjct: 210 RERDRDREKDRERERERDKERDRERDRE 237
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDK 597
+R+ E E++ + + +KER+KE + KDK
Sbjct: 758 ERRKEKEKKEKERKEKERDKEKEREKDK 785
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDK 597
K K E ER+ E++ KE+E+E D+ KD+
Sbjct: 763 KEKKEKERK-EKERDKEKEREKDKGKDR 789
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,189,029
Number of Sequences: 37544
Number of extensions: 205409
Number of successful extensions: 643
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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