Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_K03
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 31 0.68
U55376-4|AAA98006.1| 57|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 29 2.8
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 29 4.8
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 29 4.8
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 28 6.4
AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical ... 28 6.4
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 28 8.4
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 28 8.4
U64605-4|AAF98600.1| 249|Caenorhabditis elegans Hypothetical pr... 28 8.4
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical
protein C16C10.6 protein.
Length = 392
Score = 74.9 bits (176), Expect = 6e-14
Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Frame = +1
Query: 193 MASKKY-GLIVPEKGGKQLNTLKFQASRNVFGNEXXXXXXXXXXXHLLRPSD-NINRQAK 366
MASK++ GL + +K + ++ + VFG++ ++ S + + A+
Sbjct: 1 MASKRHVGLNIRKKDEPKAAPIRVSS---VFGDDDDDDNVPATATNMASASVIRVQKAAE 57
Query: 367 ISQEKALLEDPTVYQYDEIYDXXXXXXXXXXXXXXXXXX-----YIENLIKTANKRKLEN 531
+KA EDPT++ YD YD Y EN+IK +R+LE
Sbjct: 58 REHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADKNRESKYAENIIKAHARRQLEQ 117
Query: 532 ERRVERQIQKEREKEGDEFKDKEVFVTSAY 621
R ERQ +EREKEGDEF DKEVFVT AY
Sbjct: 118 FSREERQQLREREKEGDEFDDKEVFVTGAY 147
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+++ E ER ER+ QKEREKE ++ ++KE
Sbjct: 239 EKEREKEREKEREKQKEREKEREKEREKE 267
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 502 KTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
K ++RK E ER +ER+ +K REKE ++ ++KE
Sbjct: 210 KERSERK-EKERELEREKEKSREKEREKEREKE 241
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 517 RKLENERRVERQIQKEREKEGDEFKDKE 600
R+ E E+ E++ +KEREKE ++ K++E
Sbjct: 230 REKEREKEREKEREKEREKEREKQKERE 257
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 490 ENLIKTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
E ++ ++ E ER ER+ ++E+E+E + K KE
Sbjct: 219 ERELEREKEKSREKEREKEREKEREKEREKEREKQKE 255
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 514 KRKLENERRVERQIQKE--REKEGDEFKDKE 600
+RK + +RR E++ QKE +EKE E K+KE
Sbjct: 189 RRKEKEKRREEKKKQKELLKEKERSERKEKE 219
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+++ E ER E+ +KEREKE ++ ++KE
Sbjct: 217 EKERELEREKEKSREKEREKEREKEREKE 245
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E E+ E++ +KEREK+ + K++E
Sbjct: 233 EREKEREKEREKEREKEREKQKEREKERE 261
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +1
Query: 487 IENLIKTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
+E + + +++ E ER ER+ ++E+E+E + ++KE
Sbjct: 222 LEREKEKSREKEREKEREKEREKEREKEREKQKEREKE 259
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+++ E ER ER+ ++E++KE ++ ++KE
Sbjct: 235 EKEREKEREKEREKEREKQKEREKEREKE 263
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+++ E ER +++ +KEREKE ++ K +E
Sbjct: 243 EKEREKEREKQKEREKEREKEREKEKKRE 271
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +1
Query: 490 ENLIKTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
E ++K +++ E E+ E++ +K++EKE ++ K+KE
Sbjct: 356 EKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKE 392
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 490 ENLIKTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
+N K K K + E+ E+ +KE+EKE ++ KDKE
Sbjct: 361 KNKEKEREKEK-DKEKEKEKDKEKEKEKEKEKEKDKE 396
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 502 KTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
K +K K E E+ E++ +KE+EKE D+ K++E
Sbjct: 369 KEKDKEK-EKEKDKEKEKEKEKEKEKDKEKERE 400
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 508 ANKRKLENERRVERQIQKEREKEGDEFKDKE 600
AN E+ V++ +KEREKE D+ K+KE
Sbjct: 348 ANVPFYAEEKVVKKNKEKEREKEKDKEKEKE 378
>U55376-4|AAA98006.1| 57|Caenorhabditis elegans Hypothetical
protein F16H11.2 protein.
Length = 57
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + ++KE
Sbjct: 24 EREREREREREREREREREREREREREKE 52
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 502 KTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
+ +R+ E ER ER+ ++ERE+E + +++E
Sbjct: 6 RETEERERERERERERERERERERERERERERE 38
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + +++E
Sbjct: 12 ERERERERERERERERERERERERERERE 40
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + +++E
Sbjct: 14 ERERERERERERERERERERERERERERE 42
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + +++E
Sbjct: 16 ERERERERERERERERERERERERERERE 44
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + +++E
Sbjct: 18 ERERERERERERERERERERERERERERE 46
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + +++E
Sbjct: 20 ERERERERERERERERERERERERERERE 48
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+R+ E ER ER+ ++ERE+E + +++E
Sbjct: 22 ERERERERERERERERERERERERERERE 50
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 511 NKRKLENER-RVERQIQKEREKEGDEFKDKE 600
N+R+ + ER R E++ ++EREKE ++ K KE
Sbjct: 384 NRREQQRERERAEQERRREREKEREQEKAKE 414
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGD-EFKDKEVFVTSAY 621
+ + E ERR ER+ ++E+EK + E K KE+ +S Y
Sbjct: 392 RERAEQERRREREKEREQEKAKEREKKRKELEESSGY 428
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 502 KTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
K +K+ E R ER+ ++++EKE E K+KE
Sbjct: 466 KKKDKKHETEEERAERKRKEKKEKERQERKEKE 498
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 502 KTANKRKLENERRVERQIQKEREKEGDEFKDKE 600
+T +K + E E++ KE+EKE D+ K+KE
Sbjct: 1222 ETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKE 1254
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 508 ANKRKLENERRVERQIQKEREKEGDEFKDKEV 603
A KRK E ER++ + ++ KE +EF++ +V
Sbjct: 70 AKKRKEEQERKLAERRAAQKAKEEEEFRNAKV 101
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 508 ANKRKLENERRVERQIQKEREKEGDEFKDKEV 603
A KRK E ER++ + ++ KE +EF++ +V
Sbjct: 70 AKKRKEEQERKLAERRAAQKAKEEEEFRNAKV 101
>AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical
protein Y61A9LA.8 protein.
Length = 740
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 514 KRKLENERRVERQIQKEREKEGDEFKDKE 600
+RK + E E Q +KEREKE +D+E
Sbjct: 112 RRKEKEEHEKELQKEKEREKERQRERDRE 140
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 526 ENERRVERQIQKEREKEGDEFKDKE 600
E ER ERQ +++REK +E K +E
Sbjct: 126 EKEREKERQRERDREKRAEEEKRRE 150
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 520 KLENERRVERQIQKEREKEGDEFKDKEVFV 609
K E RR++++I RE+ D+FK KE+ V
Sbjct: 413 KYETARRLKKKIGGIRERYTDDFKSKEMRV 442
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 520 KLENERRVERQIQKEREKEGDEFKDKEVFV 609
K E RR++++I RE+ D+FK KE+ V
Sbjct: 485 KYETARRLKKKIGGIRERYTDDFKSKEMRV 514
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 235 PPSQVQSNHIFLMPFLLCQSLEF---IVIIYYLTRFMYSLFIMNLL*LL 98
PPS+ S F F +C+ LEF ++ ++ + M+ ++I N+L L+
Sbjct: 216 PPSEQTSTFSFGSAFKVCKKLEFDLHLIACFFASSVMF-IYIANILILM 263
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 235 PPSQVQSNHIFLMPFLLCQSLEF---IVIIYYLTRFMYSLFIMNLL*LL 98
PPS+ S F F +C+ LEF ++ ++ + M+ ++I N+L L+
Sbjct: 216 PPSEQTSTFSFGSAFKVCKKLEFDLHLIACFFASSVMF-IYIANILILM 263
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 520 KLENERRVERQIQKEREKEGDEFKDKEVFV 609
K E RR++++I RE+ D+FK KE+ V
Sbjct: 485 KYETARRLKKKIGGIRERYTDDFKSKEMRV 514
>U64605-4|AAF98600.1| 249|Caenorhabditis elegans Hypothetical
protein C05D9.7 protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 223 VQSNHIFLMPFLLCQSLEFIVIIYYLTRFMYSL 125
++ F +PF++ ++LE V +LT F Y+L
Sbjct: 123 IRQQPFFCIPFVVLRTLETFVSAVFLTAFTYAL 155
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 487 IENLIKTANKRKLENERRVERQIQKEREKEGDEFKDKEV 603
+E+ + + LEN+ R+ IQ+ RE E + DK++
Sbjct: 92 VESESRELKAKDLENQERIHAYIQQTREYELTQINDKKL 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,053,142
Number of Sequences: 27780
Number of extensions: 207916
Number of successful extensions: 947
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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