Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K02
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0128 - 31879286-31879381,31879463-31879574,31879680-318797...    84   9e-17
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223...    29   3.6  
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243...    28   6.2  
06_01_0723 - 5287864-5287885,5287971-5288043,5288521-5288626,528...    28   8.3  

>03_06_0128 -
           31879286-31879381,31879463-31879574,31879680-31879747,
           31880959-31881072,31881207-31881247,31881340-31881393,
           31881785-31881866,31882063-31882116
          Length = 206

 Score = 84.2 bits (199), Expect = 9e-17
 Identities = 35/46 (76%), Positives = 43/46 (93%)
 Frame = +3

Query: 15  IVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEIASNIRADHLYR 152
           IVEGPNFEF+TETHEELLY+KEKLL NGD+WE+EIA+N+ ++ LYR
Sbjct: 161 IVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAANLESESLYR 206


>04_04_1275 +
           32321161-32321285,32321849-32322071,32322187-32322309,
           32322391-32322519,32322939-32323024,32323233-32323356,
           32323531-32323579,32323808-32323890,32323975-32324042,
           32324187-32324264,32324460-32324547,32324640-32324756,
           32324844-32325176
          Length = 541

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +3

Query: 33  FEFSTETHEELLY----NKEKLLSNGDKWESEIASNIR 134
           F+ S E  E++L+    N EKL SNGD    +I SN+R
Sbjct: 118 FDLSEEAPEKVLHRLYCNFEKLKSNGDPIAFQIQSNLR 155


>03_01_0309 -
           2432395-2433271,2433494-2434495,2434538-2435073,
           2435579-2435716,2436050-2436148,2436278-2436346,
           2436968-2437063
          Length = 938

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SFVPLSYFVVNLVKFCDLY 196
           +F+P+ YF+ N V+ C +Y
Sbjct: 282 AFLPIKYFLTNAVRICSIY 300


>06_01_0723 -
           5287864-5287885,5287971-5288043,5288521-5288626,
           5288829-5288891,5290165-5290249,5290337-5290377,
           5291260-5291323,5291647-5291716,5291886-5291960,
           5292070-5292164,5293671-5293771,5293852-5293874,
           5293956-5294031,5294229-5294322,5294493-5294548,
           5296204-5296327,5296607-5296743
          Length = 434

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 387 FARCTYSIYMYITYKCSVVHQIKKML 464
           F  C Y++ +Y+    SVVH+IK  L
Sbjct: 397 FLYCAYTVGLYLHLAVSVVHEIKDAL 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,315,202
Number of Sequences: 37544
Number of extensions: 242547
Number of successful extensions: 409
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)