Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_K02
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00037-2|AAA50662.1|  212|Caenorhabditis elegans Hypothetical pr...    88   7e-18
AF140272-1|AAD34863.1|  212|Caenorhabditis elegans NADH oxidored...    88   7e-18
Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z71180-1|CAA94891.1|  267|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AC084153-1|AAK84596.1|  385|Caenorhabditis elegans Hypothetical ...    27   9.8  

>U00037-2|AAA50662.1|  212|Caenorhabditis elegans Hypothetical
           protein T20H4.5 protein.
          Length = 212

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 37/46 (80%), Positives = 44/46 (95%)
 Frame = +3

Query: 15  IVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEIASNIRADHLYR 152
           IVEGPNFE+STETHEELLYNKEKLL NGD+WE E+ASN++A++LYR
Sbjct: 167 IVEGPNFEYSTETHEELLYNKEKLLLNGDRWEPELASNLQAEYLYR 212


>AF140272-1|AAD34863.1|  212|Caenorhabditis elegans NADH
           oxidoreductase complex I 23.8kDa subunit protein.
          Length = 212

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 37/46 (80%), Positives = 44/46 (95%)
 Frame = +3

Query: 15  IVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEIASNIRADHLYR 152
           IVEGPNFE+STETHEELLYNKEKLL NGD+WE E+ASN++A++LYR
Sbjct: 167 IVEGPNFEYSTETHEELLYNKEKLLLNGDRWEPELASNLQAEYLYR 212


>Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 393 RCTYSIYMYITYKCSVVHQIKKMLIK 470
           +CTY+I   IT+ CS    +KK L K
Sbjct: 279 QCTYNIDDQITFPCSETQSLKKWLKK 304


>Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 393 RCTYSIYMYITYKCSVVHQIKKMLIK 470
           +CTY+I   IT+ CS    +KK L K
Sbjct: 279 QCTYNIDDQITFPCSETQSLKKWLKK 304


>Z71180-1|CAA94891.1|  267|Caenorhabditis elegans Hypothetical
           protein F22E12.3 protein.
          Length = 267

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 499 MYSELTFTQLHSSAFKFSEGFYKCINLTECT 591
           M +E  F QL  + F+F++G  + +NL  CT
Sbjct: 66  MSNEHLFCQLTETYFQFNQGLRRILNLEICT 96


>AC084153-1|AAK84596.1|  385|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.7 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 49  RHMRNFYTIRRNFCRTAINGRVRSHPISELIICTVELLCSEFS 177
           R  R FYTI    CR + N R +   + +    ++E+  +EF+
Sbjct: 165 RLCRLFYTISHEICRFSTNFRSKDRKLLKTCGKSIEIAANEFN 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,801,567
Number of Sequences: 27780
Number of extensions: 261831
Number of successful extensions: 545
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)