Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_J22
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0128 + 995103-995174,996500-996606,996909-997041,997127-99... 259 1e-69
09_05_0013 + 20067115-20067183,20067585-20067691,20067905-200680... 252 2e-67
08_02_1460 + 27295201-27295269,27295968-27296074,27296252-272963... 221 3e-58
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 36 0.024
04_04_1342 + 32775582-32775796,32776589-32776794,32777356-327774... 34 0.13
03_01_0165 + 1335444-1335747,1335890-1336167,1337440-1337496 33 0.17
09_04_0494 + 18056679-18056819,18058307-18058374,18058708-180588... 33 0.30
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 30 1.6
07_01_0954 - 8016804-8016905,8017409-8017469,8017543-8017649,801... 30 2.1
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 30 2.1
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.8
01_01_0884 - 6956337-6956431,6956514-6957651 29 2.8
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 29 3.7
08_02_1402 - 26786011-26786128,26786263-26786516,26787505-267877... 28 6.4
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 6.4
03_05_1075 - 30174725-30175363 28 8.5
01_06_1794 - 39919363-39920025 28 8.5
>03_01_0128 +
995103-995174,996500-996606,996909-997041,997127-997270,
997589-997747,997865-997938,998024-998099,998476-998531,
998651-998738,998824-998964,999057-999206,999320-999476,
1001183-1001773,1002673-1003532
Length = 935
Score = 259 bits (635), Expect = 1e-69
Identities = 120/196 (61%), Positives = 151/196 (77%)
Frame = +2
Query: 131 MGGKVENVGILAMELYFPSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINSIC 310
M + ++VGILAM++YFP V Q ELE D VS GKYTIGLGQ M FC++ ED+ S+
Sbjct: 1 MAAERKDVGILAMDIYFPPTCVLQDELENHDGVSKGKYTIGLGQDSMAFCTEVEDVISMS 60
Query: 311 LTALHRLIDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNAC 490
LT + L++ KI+ IGRLEVG+ET+IDKSKS+KT+LM +F + G TDIEG+D++NAC
Sbjct: 61 LTVVKSLLENYKIDPKCIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNAC 120
Query: 491 YGGTAALFNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVF 670
YGGTAALFN +NWVES+SWDGR +VV D AVY +GPARPTGGA A+AMLIGP+AP+ F
Sbjct: 121 YGGTAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPVSF 180
Query: 671 DCGVRASYMTHAYDFY 718
+ R S+M H YDFY
Sbjct: 181 ESKYRGSHMAHVYDFY 196
>09_05_0013 +
20067115-20067183,20067585-20067691,20067905-20068037,
20068163-20068306,20068415-20068573,20068710-20068783,
20068907-20068982,20069100-20069155,20069346-20069433,
20069508-20069648,20069737-20069886,20070165-20070398
Length = 476
Score = 252 bits (618), Expect = 2e-67
Identities = 118/196 (60%), Positives = 150/196 (76%)
Frame = +2
Query: 131 MGGKVENVGILAMELYFPSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINSIC 310
M G+ ++VGILAM++YFP V Q LE D S GKYTIGLGQ M FCS+ ED+ S+
Sbjct: 1 MDGR-KDVGILAMDIYFPPTCVLQESLEAHDGASKGKYTIGLGQDCMAFCSEVEDVISMS 59
Query: 311 LTALHRLIDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNAC 490
+T + L+ K K++ IGRLEVG+ET+IDKSKS+KT+LM +F + G TDIEG+D++NAC
Sbjct: 60 MTVVTSLLKKYKVDPKLIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNAC 119
Query: 491 YGGTAALFNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVF 670
YGGTAAL N +NWVES+SWDGR +VV D AVY +GPARPTGGA A+AMLIGP+AP+ F
Sbjct: 120 YGGTAALLNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAF 179
Query: 671 DCGVRASYMTHAYDFY 718
+ +AS+M H YDFY
Sbjct: 180 ESKYKASHMAHVYDFY 195
>08_02_1460 +
27295201-27295269,27295968-27296074,27296252-27296384,
27296621-27296714,27296828-27297030,27297167-27297240,
27297331-27297406,27297530-27297585,27297939-27298026,
27298115-27298255,27298338-27298487,27299015-27299221
Length = 465
Score = 221 bits (541), Expect = 3e-58
Identities = 109/192 (56%), Positives = 137/192 (71%), Gaps = 2/192 (1%)
Frame = +2
Query: 149 NVGILAMELYFPSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHR 328
+VGILAM++YFP V Q LE D S GKYTIGLGQ M +CS+ ED+ S+ LT +
Sbjct: 6 DVGILAMDIYFPPACVHQEALEAHDGASKGKYTIGLGQDCMAYCSEVEDVISMSLTVVAS 65
Query: 329 LIDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAA 508
L+ K I+ IGRLEVG+ET+IDKSKS+KT+LM +F + G TDIEG+D++NACYGGTAA
Sbjct: 66 LLKKYNIDPKQIGRLEVGSETVIDKSKSIKTWLMHIFEESGNTDIEGVDSSNACYGGTAA 125
Query: 509 LFNAINWVES--SSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGV 682
L N +NWVE+ W I+ VY +GPARPTGGA A+AMLIGP+AP+ F+
Sbjct: 126 LLNCVNWVETLLIQW----PILCNYYDQVYAEGPARPTGGAAAIAMLIGPNAPISFESKY 181
Query: 683 RASYMTHAYDFY 718
RAS+M H YDFY
Sbjct: 182 RASHMAHVYDFY 193
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 221 DEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRLIDKQKINLHDIGRLEVGTETIID 400
D V Y + +SK G D + + LIDK K+N ++G + VGT
Sbjct: 50 DVVIVAAYRTAICKSKRGGFKDTP-AEDLLVPVFKALIDKTKLNPSEVGDIVVGTVLAPG 108
Query: 401 KSKSVKTFLMTLFAKEGATDIEGIDTTN-ACYGGTAALFNAINWVESSSWD 550
++++ + +A G D + T N C G A+ N + +++ +D
Sbjct: 109 SQRAIECRMAAFYA--GFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYD 157
>04_04_1342 +
32775582-32775796,32776589-32776794,32777356-32777492,
32778758-32778860,32778961-32779079,32779282-32779346,
32779426-32779642,32779713-32779934
Length = 427
Score = 33.9 bits (74), Expect = 0.13
Identities = 35/152 (23%), Positives = 55/152 (36%)
Frame = +2
Query: 125 VNMGGKVENVGILAMELYFPSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINS 304
V MG K+ G PS V +L K E S G S E +
Sbjct: 93 VGMGSKLIGCGSAT-----PSLSVSNDDLSKIVETSDEWIAARTGIRNRRVLSGNETLRE 147
Query: 305 ICLTALHRLIDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTN 484
+ + A + ++ ++N D+ + + T T D L A+ G + G D T
Sbjct: 148 LSVQAAKKALEMAQVNADDVDLVLLCTSTPDDLFGGAAQVL----AEVGCANAFGFDITA 203
Query: 485 ACYGGTAALFNAINWVESSSWDGRKAIVVAGD 580
AC G L A +++ R +V+ D
Sbjct: 204 ACSGFIIGLITATRFIKGGGI--RNILVIGAD 233
>03_01_0165 + 1335444-1335747,1335890-1336167,1337440-1337496
Length = 212
Score = 33.5 bits (73), Expect = 0.17
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +2
Query: 389 TIIDKSKSV--KTFLMTLFAKEGATDIEGIDTTNACYGGTAALFNAINWVESSSWDGRKA 562
++ID+++ ++ L+ L A A + + AC GG A L WV + G
Sbjct: 72 SLIDQARGFHFRSSLVDLPAVSAARSLLILCAYTACGGGAAYL-----WVAVACSVGSVC 126
Query: 563 IVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRASYMTHAY 709
VVA V+G P R G L+ +A + + A+++ AY
Sbjct: 127 YVVAKAAVVFGAAPDRAVLGLQGKGQLVAVEAMFLMSLALAAAHIAMAY 175
>09_04_0494 +
18056679-18056819,18058307-18058374,18058708-18058811,
18058902-18058945
Length = 118
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 681 TPQSNTRGASGPINIATAPAPPVGLAGPFP*TAMSPATT 565
+P T GA+ A +PAPP G AG A +PATT
Sbjct: 4 SPWPPTTGAASAAAAAASPAPPEGAAGGAATPAAAPATT 42
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 687 ARTPQSNTRGASGPINIATAPAPPVGLAGPFP 592
AR N A+ PI +A PAPP AGP P
Sbjct: 13 ARLASRNLLRATRPIALAPPPAPPETFAGPGP 44
>07_01_0954 -
8016804-8016905,8017409-8017469,8017543-8017649,
8018278-8018382,8018460-8018546,8018631-8018711,
8018872-8018944,8019288-8019400,8019695-8019788,
8020060-8020115,8020212-8020295,8020384-8020476,
8020592-8020765,8020956-8021099,8021225-8021380
Length = 509
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 200 QTELEKFDEVSTGKYTIGLGQS 265
QTE E+F E+S GK +G+G++
Sbjct: 431 QTEAERFSELSDGKVPVGVGEN 452
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 113 KQYTVNMGGKVENVGILAMELYFP-SQYVDQTELEKFDEVSTGKYTIGLGQ-SKMGFCSD 286
+Q+ + KV L++ +Y S+ D TEL K+D V T YTI + K F D
Sbjct: 457 RQWASELAAKVTESSKLSVLVYHGGSRTKDPTELTKYDVVVT-TYTIVANEVPKQNFDED 515
Query: 287 REDINS 304
E+ NS
Sbjct: 516 MEEKNS 521
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -2
Query: 636 ATAPAPPVGLAGPFP*TAMSPATTMAFLPSQDEDSTQFMALKRAAVPP*QALVVSIPSMS 457
A APAP + L P P + +SP T P D+ A + P V PS
Sbjct: 225 APAPAPLLLLPAPPPSSDVSPVTVQVAAPPSSSDAAPVPATLLSDASPVIVQVPVPPSSD 284
Query: 456 VAP 448
AP
Sbjct: 285 AAP 287
>01_01_0884 - 6956337-6956431,6956514-6957651
Length = 410
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 602 PARPTGGAGAVAMLIGPDAPLVFDCGVRA 688
P +P A A A+ P P+V CGVRA
Sbjct: 277 PTQPPTAAAAAAVAPAPPQPVVVACGVRA 305
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -2
Query: 699 VMYEARTPQSNTRGASGPINIATAPAPPVGLAGPFP*TAMSPATTMAFLPSQDEDSTQFM 520
V+Y A P ++ +GA P + AP+P V + G + +P T A PS +
Sbjct: 72 VVYGAPMPAAHHQGAYQPGGVYRAPSPGVPVIGGY--ARSTPVTIRAPPPSHSSAPAPYQ 129
Query: 519 ALKRAAVP 496
A P
Sbjct: 130 PAAAAPAP 137
>08_02_1402 -
26786011-26786128,26786263-26786516,26787505-26787732,
26788920-26789759
Length = 479
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Frame = -2
Query: 684 RTPQSNTRGASGPINIATAPAP---PVGLAGPFP*TA---MSPATTMAFLPSQ---DEDS 532
RTP+ + ASG + AP P A P P T+ M+PA + + DED
Sbjct: 206 RTPRRTSAAASGRLQEKQAPPPLPHAAATAAPLPYTSLLMMAPANCTELMENNRVGDEDE 265
Query: 531 TQFMALKRAAVPP*Q 487
+VPP Q
Sbjct: 266 NVLWESTAPSVPPTQ 280
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 690 EARTPQSNTRGASGPINIATAPAPPVGLA--GPFP*TAMSPATTMAFLPSQDE 538
EA P T G G +N+ APA P +A G A +PA A LPS +
Sbjct: 669 EAPPPAGPTAG--GDVNVEPAPAVPAAVAVNGVAGEDAAAPAPDAAALPSSSD 719
>03_05_1075 - 30174725-30175363
Length = 212
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 182 PSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRLIDK 340
PS++ + F V K+T G +MGF ED+N + A + DK
Sbjct: 124 PSRHSARQAARPFS-VPVSKHTEGRLLKEMGFIDKEEDLNDEAIAAFVKAFDK 175
>01_06_1794 - 39919363-39920025
Length = 220
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = +2
Query: 461 IEGIDTTNACYGGTAALFNAINWVESSSWDGRKAIVVAGDIAVYGKGPARP-TGGAGAVA 637
+ G + YGG+ N+ + G AG + +YG G P GG G
Sbjct: 72 VVGYAASGGGYGGSTKANAGANYGGGGGY-GYNGGYNAGSVTLYGAGVGTPYYGGGGGGG 130
Query: 638 MLIGPDAPLVFDCGVRASYMT 700
G P GV A Y T
Sbjct: 131 YTGGGSVPYGGGGGVPAGYWT 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,952,271
Number of Sequences: 37544
Number of extensions: 387431
Number of successful extensions: 1182
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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