Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_J19
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 293 1e-79
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 293 1e-79
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 283 1e-76
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 283 1e-76
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 171 5e-43
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 157 1e-38
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 124 5e-29
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 124 5e-29
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 124 9e-29
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 124 9e-29
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 123 2e-28
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 121 5e-28
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 121 5e-28
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 117 8e-27
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 117 1e-26
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 117 1e-26
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 110 9e-25
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 110 9e-25
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 110 1e-24
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 108 4e-24
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 108 5e-24
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 107 6e-24
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 99 3e-21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 98 7e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 98 7e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 98 7e-21
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 96 2e-20
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 96 2e-20
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 96 2e-20
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 96 3e-20
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 94 1e-19
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 92 3e-19
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 92 3e-19
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 92 3e-19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 88 7e-18
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 88 7e-18
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 75 4e-14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 75 4e-14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 71 9e-13
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 70 2e-12
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 55 6e-08
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 36 0.023
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 36 0.041
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.16
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.22
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.38
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.66
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 2.7
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 2.7
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 4.7
U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 4.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 4.7
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.7
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 293 bits (718), Expect = 1e-79
Identities = 140/201 (69%), Positives = 170/201 (84%)
Frame = +2
Query: 143 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 322
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 323 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 502
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 503 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFK 682
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLS GFKD I++VF+
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 683 MLSADVQVILLSATMPDDVLE 745
+ DVQV+LLSATMP +VL+
Sbjct: 198 SMPQDVQVVLLSATMPSEVLD 218
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 293 bits (718), Expect = 1e-79
Identities = 140/201 (69%), Positives = 170/201 (84%)
Frame = +2
Query: 143 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 322
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 323 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 502
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 503 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFK 682
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLS GFKD I++VF+
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 683 MLSADVQVILLSATMPDDVLE 745
+ DVQV+LLSATMP +VL+
Sbjct: 198 SMPQDVQVVLLSATMPSEVLD 218
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 283 bits (693), Expect = 1e-76
Identities = 132/192 (68%), Positives = 161/192 (83%)
Frame = +2
Query: 170 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 349
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 350 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 529
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 530 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVI 709
G HVV GTPGRV+DMI RR L IKL VLDEADEML+ GFK+ ++D+++ L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 710 LLSATMPDDVLE 745
LLSAT+P ++LE
Sbjct: 204 LLSATLPHEILE 215
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 283 bits (693), Expect = 1e-76
Identities = 132/192 (68%), Positives = 161/192 (83%)
Frame = +2
Query: 170 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 349
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 350 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 529
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 530 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVI 709
G HVV GTPGRV+DMI RR L IKL VLDEADEML+ GFK+ ++D+++ L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 710 LLSATMPDDVLE 745
LLSAT+P ++LE
Sbjct: 204 LLSATLPHEILE 215
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 171 bits (416), Expect = 5e-43
Identities = 91/185 (49%), Positives = 122/185 (65%)
Frame = +2
Query: 191 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 370
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 371 SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 550
Q ++LAP R +AQ+ + + +LG +LN C+G E+ + HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMG 115
Query: 551 TPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSATMP 730
TP D ++ + IK+FVLDEADEMLS GFKD I++VF+ + DVQV+LLSATMP
Sbjct: 116 TP---KDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 731 DDVLE 745
+VL+
Sbjct: 173 SEVLD 177
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 157 bits (380), Expect = 1e-38
Identities = 72/186 (38%), Positives = 118/186 (63%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 361
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 362 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 541
I +++ QA+++ PTRELA Q ++ + L H+ K GGT++R+DI +L VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 542 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSA 721
V+ TPGR+ D++ + K VLDEAD++LS F+ + + L + QV+L SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 722 TMPDDV 739
T P+ V
Sbjct: 225 TFPNTV 230
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 124 bits (300), Expect = 5e-29
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 361
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 362 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 535
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXG-FKDXIHDVFKMLSADVQVIL 712
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 713 LSATMPDDV 739
SAT+P ++
Sbjct: 223 FSATLPKEL 231
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 124 bits (300), Expect = 5e-29
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 361
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 362 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 535
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXG-FKDXIHDVFKMLSADVQVIL 712
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 713 LSATMPDDV 739
SAT+P ++
Sbjct: 223 FSATLPKEL 231
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 124 bits (298), Expect = 9e-29
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 5/234 (2%)
Frame = +2
Query: 53 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 229
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 230 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 409
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 410 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 586
RELA QI + ALG + KC +GG ++ R+L HVVV TPGR+ D+I
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDP 226
Query: 587 ---ALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSATMPDDV 739
A I+ FVLDEAD ML + D + +F+ +S Q +LLSAT+ +++
Sbjct: 227 DTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 124 bits (298), Expect = 9e-29
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 5/234 (2%)
Frame = +2
Query: 53 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 229
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 230 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 409
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 410 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 586
RELA QI + ALG + KC +GG ++ R+L HVVV TPGR+ D+I
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDP 226
Query: 587 ---ALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSATMPDDV 739
A I+ FVLDEAD ML + D + +F+ +S Q +LLSAT+ +++
Sbjct: 227 DTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 123 bits (296), Expect = 2e-28
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 15/201 (7%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 349
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 350 IL-----QQIDTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNA------KCHACI 487
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 488 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXI 667
GG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D I
Sbjct: 308 GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEI 367
Query: 668 HDVFKMLSADVQVILLSATMP 730
+F A Q +L SATMP
Sbjct: 368 KSIFYFFKAQRQTLLFSATMP 388
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 121 bits (292), Expect = 5e-28
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 358
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 359 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 535
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILL 715
+++ TPGR+ +I L + ++ V DEAD + GF+D + + K + Q +L
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 716 SATMP 730
SAT+P
Sbjct: 205 SATLP 209
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 121 bits (292), Expect = 5e-28
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 358
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 359 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 535
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILL 715
+++ TPGR+ +I L + ++ V DEAD + GF+D + + K + Q +L
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 716 SATMP 730
SAT+P
Sbjct: 205 SATLP 209
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 117 bits (282), Expect = 8e-27
Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 361
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 362 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 535
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILL 715
H+VVGTPGR+ + L + +K FVLDE D+M+ G D DV ++ QV++
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDVQEI----KQVMMF 215
Query: 716 SATMPDDV 739
SAT+P ++
Sbjct: 216 SATLPKEL 223
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 117 bits (281), Expect = 1e-26
Identities = 61/185 (32%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +2
Query: 179 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 358
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 359 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 535
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILL 715
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV +
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 716 SATMP 730
SAT P
Sbjct: 202 SATYP 206
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 117 bits (281), Expect = 1e-26
Identities = 61/185 (32%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +2
Query: 179 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 358
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 359 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 535
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 536 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILL 715
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV +
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 716 SATMP 730
SAT P
Sbjct: 202 SATYP 206
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 116 bits (280), Expect = 1e-26
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 1/197 (0%)
Frame = +2
Query: 152 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 331
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 332 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 511
F+I +LQ + + L+L PTRELA QI + ALG + +GG ++
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQ 155
Query: 512 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKML 688
L H++V TPGR+ D + + + +K ++DEAD +L+ F+ + + K++
Sbjct: 156 AMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVI 215
Query: 689 SADVQVILLSATMPDDV 739
+ + L SATM V
Sbjct: 216 PRERRTYLFSATMTKKV 232
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 113 bits (273), Expect = 1e-25
Identities = 66/176 (37%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Frame = +2
Query: 230 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----- 391
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 392 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 571
L+L PTRELAQQ+Q+V I L K GG + R LE GV +VV TPGR+ D
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 572 MITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSATMPDDV 739
+ + VLDEAD ML GF+ I + + D Q ++ SAT P +V
Sbjct: 266 FLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEV 321
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 110 bits (265), Expect = 9e-25
Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 346
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 347 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 523
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 326
Query: 524 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SXGFKDXIHDVFKML--- 688
+ +V+GTPG D + + + + + I+ VLDEAD M+ GF D ++ M+
Sbjct: 327 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 386
Query: 689 SADVQVILLSATMPDDVL 742
S VQ +L SAT + V+
Sbjct: 387 SDSVQSMLFSATYDEPVI 404
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 110 bits (265), Expect = 9e-25
Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 346
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 347 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 523
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 351
Query: 524 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SXGFKDXIHDVFKML--- 688
+ +V+GTPG D + + + + + I+ VLDEAD M+ GF D ++ M+
Sbjct: 352 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 411
Query: 689 SADVQVILLSATMPDDVL 742
S VQ +L SAT + V+
Sbjct: 412 SDSVQSMLFSATYDEPVI 429
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 110 bits (265), Expect = 9e-25
Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 346
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 347 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 523
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 735
Query: 524 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SXGFKDXIHDVFKML--- 688
+ +V+GTPG D + + + + + I+ VLDEAD M+ GF D ++ M+
Sbjct: 736 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 795
Query: 689 SADVQVILLSATMPDDVL 742
S VQ +L SAT + V+
Sbjct: 796 SDSVQSMLFSATYDEPVI 813
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 110 bits (265), Expect = 9e-25
Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 352
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 353 LQQIDTSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 502
L I TS+ + + A+I+APTRELAQQI++ G L K + IGG +
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASR 418
Query: 503 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFK 682
+ +L GV VV+ TPGR+ D++ R L N +LDEAD ML GF+ + V +
Sbjct: 419 EDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLE 478
Query: 683 ML 688
+
Sbjct: 479 YM 480
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 110 bits (264), Expect = 1e-24
Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Frame = +2
Query: 158 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 337
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 338 FSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 502
F + + + I + E A+ILAPTRELA Q K L K GG +
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGI 417
Query: 503 REDIRQLESGVHVVVGTPGRVYDMI---TRRALHANTIKLFVLDEADEMLSXGFKDXIHD 673
E I L+ G +VV TPGR+ D++ + + + + VLDEAD M GF+ I
Sbjct: 418 SEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMK 477
Query: 674 VFKMLSADVQVILLSATMP 730
V + D Q +L SAT P
Sbjct: 478 VVNNIRPDKQTVLFSATFP 496
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 108 bits (260), Expect = 4e-24
Identities = 65/191 (34%), Positives = 104/191 (54%), Gaps = 5/191 (2%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 361
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 362 IDTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 529
+ + ALI++PTRELA Q + A+G H C IGG++V + R S
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRIS 196
Query: 530 GVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQV 706
G++++V TPGR+ + A + +++++ VLDEAD ML GF ++ + L A+ Q
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQT 256
Query: 707 ILLSATMPDDV 739
+L SAT +V
Sbjct: 257 LLFSATQTRNV 267
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 108 bits (259), Expect = 5e-24
Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 30/253 (11%)
Frame = +2
Query: 77 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 250
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 251 AIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELA 421
IQQ I + G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELA 232
Query: 422 QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI-------- 577
Q+ +V L + + C GG +++ L SG VVV TPGR+ D +
Sbjct: 233 IQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNL 292
Query: 578 -----------------TRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQV 706
+R+ ++ VLDEAD ML F+D ++++ ++ + + Q
Sbjct: 293 SNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQT 352
Query: 707 ILLSATMPDDVLE 745
+L SATM +++ E
Sbjct: 353 LLFSATMTEEIDE 365
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 107 bits (258), Expect = 6e-24
Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 7/207 (3%)
Frame = +2
Query: 140 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 319
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 320 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 478
+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVKLSQALPFLQA 195
Query: 479 ACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFK 658
+ N E+ LE HVVV TPG++ M + R + + V+DEAD +LS G++
Sbjct: 196 INLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYE 255
Query: 659 DXIHDVFKMLSADVQVILLSATMPDDV 739
+ + + L Q ++ SAT+ DD+
Sbjct: 256 EEMIKIRSKLPPTYQCLMTSATLKDDM 282
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 99.1 bits (236), Expect = 3e-21
Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Frame = +2
Query: 233 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 388
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 389 ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTP 556
L+L+PTRELAQQI+ V N C+ GG + E + GV +V+ TP
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATP 220
Query: 557 GRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSATMPDD 736
GR+ D+ + ++ VLDEAD ML GF+ I + + D V L SAT P+
Sbjct: 221 GRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEG 280
Query: 737 V 739
V
Sbjct: 281 V 281
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 97.9 bits (233), Expect = 7e-21
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 352
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 353 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 487
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 257
Query: 488 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDX 664
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+
Sbjct: 258 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 317
Query: 665 IHDV 676
I +
Sbjct: 318 IRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 97.9 bits (233), Expect = 7e-21
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 352
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 353 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 487
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 241
Query: 488 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDX 664
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+
Sbjct: 242 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 301
Query: 665 IHDV 676
I +
Sbjct: 302 IRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 97.9 bits (233), Expect = 7e-21
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Frame = +2
Query: 173 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 352
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 353 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 487
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 238
Query: 488 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDX 664
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+
Sbjct: 239 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 298
Query: 665 IHDV 676
I +
Sbjct: 299 IRKI 302
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 96.3 bits (229), Expect = 2e-20
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Frame = +2
Query: 176 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 356 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 508
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 509 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDVFKM 685
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 686 LS----ADVQVILLSATMPDDVLE 745
S + Q ++ SAT PD V E
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQE 544
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 96.3 bits (229), Expect = 2e-20
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Frame = +2
Query: 176 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 356 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 508
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 509 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDVFKM 685
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 686 LS----ADVQVILLSATMPDDVLE 745
S + Q ++ SAT PD V E
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQE 544
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 96.3 bits (229), Expect = 2e-20
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Frame = +2
Query: 176 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 356 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 508
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 509 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDVFKM 685
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 686 LS----ADVQVILLSATMPDDVLE 745
S + Q ++ SAT PD V E
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQE 544
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 95.9 bits (228), Expect = 3e-20
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
Frame = +2
Query: 209 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 379
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 380 E-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 556
+I++PTREL+ Q V+ L + N +GG+N + +L GV ++V TP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 557 GRVYDMI--TRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSAT 724
GR+ D + T L N +K ++DEAD +L GF+ + V + L Q +L SAT
Sbjct: 199 GRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSAT 255
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 93.9 bits (223), Expect = 1e-19
Identities = 69/216 (31%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Frame = +2
Query: 158 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 334
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 335 TFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELAQQIQKVVIALGDHLN 466
F + +ILQ + S+ R+ Q AL+L+PTREL+ QI
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTP 278
Query: 467 AKCHACIGGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 643
GG N ++ I +L G H+++ TPGR+ D++ + + + VLDEAD ML
Sbjct: 279 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 338
Query: 644 SXGFKDXIHDVF---KMLSADVQV-ILLSATMPDDV 739
GF+ I + +M S + ++ + SAT P ++
Sbjct: 339 DMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEI 374
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 92.3 bits (219), Expect = 3e-19
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Frame = +2
Query: 176 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 356 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 508
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 509 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDVFKM 685
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 686 LS----ADVQVILLSATMPDDVLE 745
S + Q ++ SAT PD V E
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQE 755
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 92.3 bits (219), Expect = 3e-19
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Frame = +2
Query: 176 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 356 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 508
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 509 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDVFKM 685
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 686 LS----ADVQVILLSATMPDDVLE 745
S + Q ++ SAT PD V E
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQE 755
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 92.3 bits (219), Expect = 3e-19
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Frame = +2
Query: 176 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 356 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 508
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 509 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDVFKM 685
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 686 LS----ADVQVILLSATMPDDVLE 745
S + Q ++ SAT PD V E
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQE 755
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 89.4 bits (212), Expect = 2e-18
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Frame = +2
Query: 179 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS----I 346
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 347 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 523
I+ Q D E A+I+ PTRELA Q+ + N GG + E +L
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
Query: 524 ES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADV 700
++ G +VV TPGR+ D++ A + V DEAD M GF+ + + + D
Sbjct: 386 QNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDR 445
Query: 701 QVILLSATMPDDV 739
Q ++ SAT V
Sbjct: 446 QCLMFSATFKQKV 458
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 87.8 bits (208), Expect = 7e-18
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Frame = +2
Query: 167 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 346
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 347 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 499
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 500 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDV 676
V + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF I +
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
Query: 677 --FKMLSAD--VQVILLSATMPDDVLE 745
+K + + Q ++ SAT P V E
Sbjct: 475 INYKNMPKNDKRQTMMFSATFPSSVQE 501
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 87.8 bits (208), Expect = 7e-18
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Frame = +2
Query: 167 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 346
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 347 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 499
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 500 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SXGFKDXIHDV 676
V + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF I +
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
Query: 677 --FKMLSAD--VQVILLSATMPDDVLE 745
+K + + Q ++ SAT P V E
Sbjct: 475 INYKNMPKNDKRQTMMFSATFPSSVQE 501
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Frame = +2
Query: 293 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 463
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 464 NAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMI----TRRALHANTIKLFVLDE 628
N GG V ++I+ ++ V+++V TPGR++ +I T A T++L V+DE
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
Query: 629 ADEMLSXGFKDXIHDVFKMLSADVQVILLSAT 724
AD F+D + ++ + + L SAT
Sbjct: 168 ADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 75.4 bits (177), Expect = 4e-14
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Frame = +2
Query: 179 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 356 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 505
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 506 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVF 679
+++ L S ++++V T GR+ D + + + +K VLDEAD M+ D +V
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDS--NDFGEEVS 913
Query: 680 KMLSA----DVQVILLSATMPDDV 739
K++ + Q +L SA+ +D+
Sbjct: 914 KIIGSPGERTQQTVLFSASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 75.4 bits (177), Expect = 4e-14
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Frame = +2
Query: 179 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 355
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 356 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 505
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 506 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVF 679
+++ L S ++++V T GR+ D + + + +K VLDEAD M+ D +V
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDS--NDFGEEVS 913
Query: 680 KMLSA----DVQVILLSATMPDDV 739
K++ + Q +L SA+ +D+
Sbjct: 914 KIIGSPGERTQQTVLFSASFSEDL 937
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 74.9 bits (176), Expect = 5e-14
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 29/256 (11%)
Frame = +2
Query: 47 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE------E 208
SS ++SE+ E + P K+Q G D G + + D K+ E
Sbjct: 107 SSAKKSENATETTTEKP-KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFLPNE 165
Query: 209 LLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI------- 364
+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 365 ----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLES 529
T +R +ALI+APTREL QI K + AL + +GG V+++ +
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQ 285
Query: 530 GVHVVVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSXG-FKDXIHDVFKMLS 691
+VV TPGR++ M+ +K V+DE D M+ G F + H + K+
Sbjct: 286 RPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHE 345
Query: 692 AD----VQVILLSATM 727
+Q ++ SAT+
Sbjct: 346 ESEKEKLQTLVFSATL 361
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 72.1 bits (169), Expect = 4e-13
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Frame = +2
Query: 164 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 343
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 344 ISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 493
+ I+ +I +T + Q ALILAPTRELA QI + + + + G
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQ 496
Query: 494 TNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSXGFKDXI 667
++ + ++ +G +++GT GR+ D + + ++ V DEAD +L KD +
Sbjct: 497 SDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPL 554
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 70.9 bits (166), Expect = 9e-13
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Frame = +2
Query: 287 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 466
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 467 A---KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 637
+ +C G N+ + +R LE+G +VVGTP RV+D+I L ++ V+DE D+
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQ 369
Query: 638 MLSXGFKDXIHDV 676
L+ G + H +
Sbjct: 370 FLA-GKNNCAHQI 381
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 182 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 358
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 70.1 bits (164), Expect = 2e-12
Identities = 40/117 (34%), Positives = 63/117 (53%)
Frame = +2
Query: 389 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 568
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 569 DMITRRALHANTIKLFVLDEADEMLSXGFKDXIHDVFKMLSADVQVILLSATMPDDV 739
M + R + + V+DEAD +LS G+++ + + L Q ++ SAT+ DD+
Sbjct: 159 RMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDM 215
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 68.9 bits (161), Expect = 4e-12
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Frame = +2
Query: 221 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 364
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 365 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 541
T +R +ALI+APTREL QI K + AL + +GG V+++ + +
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDI 122
Query: 542 VVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSXG-FKDXIHDVFKMLSAD-- 697
VV TPGR++ M+ +K V+DE D M+ G F + H + K+
Sbjct: 123 VVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEK 182
Query: 698 --VQVILLSATM 727
+Q ++ SAT+
Sbjct: 183 EKLQTLVFSATL 194
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 54.8 bits (126), Expect = 6e-08
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Frame = +2
Query: 170 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 349
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 350 ILQQI----------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 499
++ +I ++ + A++L PTRELA Q + L + I N
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ------TYTEFLKYCANTSISAAN 237
Query: 500 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML------SXGFKD 661
+ ++ ++V TP R+ + + + ++++ V+DE+D + F++
Sbjct: 238 FSGEETDIQH-ADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRLFEVVEGQDKCFRN 294
Query: 662 XIHDVFKMLSAD-VQVILLSATMPDDV 739
+ ++K A +V SAT +V
Sbjct: 295 QLAAIYKACDAKCTRVAFFSATFSHEV 321
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Frame = +2
Query: 245 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 421
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 422 QQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRR--- 586
QI D AK + G + ++ RQL S +V+V TP R+ +T +
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPP 261
Query: 587 ALHANTIKLFVLDEADEM 640
+ + ++ ++DEAD M
Sbjct: 262 PIDLSKLRFLIVDEADRM 279
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 36.3 bits (80), Expect = 0.023
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Frame = +2
Query: 248 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQA---LIL 400
+A+QQ++I R ++ A +G GKT F I ++ + T+I + LIL
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILIL 175
Query: 401 APTRELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 571
A T L +Q+ +V++ L D + I + + + + T G++
Sbjct: 176 ANTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKA 235
Query: 572 MITRRALHANTIKLFVLDEADEMLSXG-FKDXIHDVFKMLSADV 700
I + + + +K+ +LDE+D+M+ F + I V L DV
Sbjct: 236 SIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQEDV 279
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 35.5 bits (78), Expect = 0.041
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +2
Query: 233 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 409
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 410 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 586
++A ++ + + G D++ + G +++ TP R +D I+RR
Sbjct: 1377 EDMATKVYADWKRRLEPAIGHTIVLLTGEQTM-DLKLAQRG-QLIISTPER-WDNISRRW 1433
Query: 587 --ALHANTIKLFVLDE 628
+KLF+ D+
Sbjct: 1434 KQRKSVQNVKLFIADD 1449
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 545 PPHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 453
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 674 HHGX-GP*NLWTTFHQLHQEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHGH 498
HHG G + H H E H +H ++H H E HH+P HGH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE-----HHHAPAH---HGH 576
Query: 497 WCHQCKHGI*HSSDHQ 450
H HG+ H H+
Sbjct: 577 HGHHGSHGV-HHGHHE 591
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 248 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ- 424
+A+QQ +I +GR ++ +A +G GKT F ++ I+ +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 425 QIQKVVIALGDHLNAKCHACIG 490
I AL D L +C +G
Sbjct: 174 LIMASTSALVDQLFNRCELILG 195
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 296 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 475
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 476 HA-CIGGTNVREDI 514
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 137 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 39
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 254 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ-QI 430
+QQ +I +GR ++ +A +G GKT F ++ I+ ++ Q+ T+ I
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 431 QKVVIALGDHLNAKCHACIG 490
AL D L +C +G
Sbjct: 76 MASTSALVDQLFNRCELILG 95
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.7
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +2
Query: 230 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 397
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 398 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 574
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 575 ITRRALHANTIKLFVLDEA 631
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.7
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +2
Query: 230 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 397
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 398 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 574
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 575 ITRRALHANTIKLFVLDEA 631
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 296 VIAQAQSGTGKTATFSISILQQIDTSIREC 385
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical
protein F32A5.4a protein.
Length = 243
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 482 CIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 637
C G D RQL G V G G ++T L+AN I+L L +++
Sbjct: 10 CAVGVASHRDKRQLSIGTISVSGAGGSTGCVVTGNVLYANGIRLRNLTSSEQ 61
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +2
Query: 257 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 427
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 428 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 574
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +2
Query: 257 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 427
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 428 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 574
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 107 DPSMAHFWNPLANLLTFFQTNKT 39
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 50 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 190
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 599 WHEAHDELSYHIHDLECPPPHEHHSPVGE 513
+H+AH + H CPPPH P+GE
Sbjct: 25 FHKAH--IDPHALAQTCPPPHGGEMPLGE 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,507,305
Number of Sequences: 27780
Number of extensions: 434588
Number of successful extensions: 1345
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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