Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_J18
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0717 + 23834965-23835051,23836760-23836859,23837685-238377... 82 3e-16
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 76 2e-14
11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108... 70 2e-12
12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279,101... 69 4e-12
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 50 2e-06
05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-14... 45 4e-05
05_01_0488 - 4070506-4072277,4072455-4072557 31 1.0
02_05_0794 + 31789186-31789330,31789613-31789755 29 3.1
09_02_0041 - 3350332-3350460,3350560-3350649,3350732-3350812,335... 28 7.2
12_02_0437 - 19084990-19087695 27 9.6
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 27 9.6
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 27 9.6
03_06_0059 + 31334842-31334868,31335064-31335330,31337162-31337344 27 9.6
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 27 9.6
>06_03_0717 +
23834965-23835051,23836760-23836859,23837685-23837770,
23837867-23837958,23838659-23838773,23838847-23839029
Length = 220
Score = 82.2 bits (194), Expect = 3e-16
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +1
Query: 208 TTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHG-TKNXXXXXXXXXXXXXYEKQL 384
T +I KL ET E+L KK+ L KK +LEV+ A+ KN YE+Q+
Sbjct: 19 TALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQI 78
Query: 385 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQH 564
Q+ +I Q LEGA + ++ +R A+AMK HK ++D V MD+I +
Sbjct: 79 EQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNM 138
Query: 565 DISREITEAISNNVAFPNDIXEDEL 639
+ R+I + +S + D EDEL
Sbjct: 139 ENMRQIQDLLSAPIGAAADFDEDEL 163
>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +1
Query: 223 IQKLRETEELLIKKQEFLEKKIDLEVQTARKHG-TKNXXXXXXXXXXXXXYEKQLTQIDG 399
+ KL ET ++L KK++ LEKK E++ A++ KN YE+Q+ Q+
Sbjct: 785 LDKLNETLDMLEKKEKVLEKKAAAELERAKEFSKAKNKRAAIQSLKRKKLYEQQIEQLGN 844
Query: 400 TLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISRE 579
+I Q LE A + ++ +R A AMK K ++D V MD+I EQ + ++
Sbjct: 845 FQLRIHDQMIMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQ 904
Query: 580 ITEAISNNVAFPNDIXEDEL 639
I +A+S + D EDEL
Sbjct: 905 IQDALSAPLGASADFDEDEL 924
>11_01_0130 -
1079515-1079685,1079847-1079961,1080237-1080328,
1080435-1080520,1080957-1081056,1082180-1082210,
1082416-1082471
Length = 216
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Frame = +1
Query: 238 ETEELLIKKQEFLEKKIDLEVQTARKH-GTKNXXXXXXXXXXXXXYEKQLTQIDGTLTQI 414
ET E+L KK+ FL+KK EV+ A+ + KN YE Q+ Q+ ++
Sbjct: 29 ETLEMLEKKECFLQKKASAEVEKAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRV 88
Query: 415 EAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAI 594
Q LE A ++ +R ++A+K H+ + +D + + +++ E + R+I EA+
Sbjct: 89 HDQIIMLESAKATTDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEAL 148
Query: 595 SNNVAFPNDIXEDEL 639
+ + D EDEL
Sbjct: 149 ATPIGASADFDEDEL 163
>12_01_0133 -
1011442-1011609,1011792-1011906,1012188-1012279,
1012384-1012469,1012989-1013088,1014139-1014333
Length = 251
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Frame = +1
Query: 238 ETEELLIKKQEFLEKKIDLEVQTARKH-GTKNXXXXXXXXXXXXXYEKQLTQIDGTLTQI 414
+T E+L KK+ FL+KK EV+ A+ + KN YE Q+ Q+ ++
Sbjct: 65 QTLEMLEKKECFLQKKASAEVERAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRV 124
Query: 415 EAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAI 594
Q LE A ++ +R ++A+K H+ + +D + + +++ E + R+I EA+
Sbjct: 125 HDQIIMLESAKATTDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEAL 184
Query: 595 SNNVAFPNDIXEDEL 639
+ + D EDEL
Sbjct: 185 ATPIGASADFDEDEL 199
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/90 (24%), Positives = 46/90 (51%)
Frame = +1
Query: 370 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 549
YE+Q + ++ A +G Q +N M+ A +K K + ++ + ++ D+
Sbjct: 75 YEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMMKTVKIEDIDNMQDE 134
Query: 550 IAEQHDISREITEAISNNVAFPNDIXEDEL 639
+ + D+S EI E++ + P+D+ E+EL
Sbjct: 135 MTDLMDVSNEIQESLGRSYNIPDDVDEEEL 164
>05_01_0020 +
143273-143592,144278-144371,144466-144537,144675-144786,
145179-145327,145484-145510,145931-145981
Length = 274
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +1
Query: 370 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 549
YE Q + ++ A EG Q + M+ A +K K + ++ + + D+
Sbjct: 108 YEGQRDMLYNQTYNLDQVAFASEGLKDAQQTMTAMKAANKELKGMMKTVKLEDIDSLQDE 167
Query: 550 IAEQHDISREITEAISNNVAFPNDIXEDEL 639
+ + D+S EI E + + P+DI E+EL
Sbjct: 168 MMDLMDVSNEIQETLGRSYNVPDDIDEEEL 197
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Frame = +1
Query: 379 QLTQIDGTLTQIEAQREALEGAN-TNAQVLNTMREA-ANAMK-----LAHKDIDVDKVHD 537
+ + + L ++++++EALE N ++ ++E+ +A K LAH+D ++DK
Sbjct: 229 ETSSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEIDKCKQ 288
Query: 538 IMDDIAEQ--HDIS 573
++ ++E+ HDIS
Sbjct: 289 ELEVLSEKYLHDIS 302
>02_05_0794 + 31789186-31789330,31789613-31789755
Length = 95
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 412 IEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVH 534
+ + AL+ + A+ L ++R +NA LA + +D DK+H
Sbjct: 1 MSVETAALQLSGEKARALTSIRRYSNAPILAAQRLDTDKIH 41
>09_02_0041 -
3350332-3350460,3350560-3350649,3350732-3350812,
3351377-3351423,3351844-3351909,3352019-3352077,
3352572-3352639,3352723-3352786,3352907-3353025,
3353152-3353267,3353509-3353542
Length = 290
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 512 TSMWTKYTISWMILLNNTISLVRSPRRSV 598
+++W KY ++ +LL N ISL+R R +
Sbjct: 131 SNLWPKYPSNFDVLLENYISLLRDLSRKI 159
>12_02_0437 - 19084990-19087695
Length = 901
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 376 KQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIA 555
K L Q LTQ+ + AN N + +++ + +LA D D+V D+ + A
Sbjct: 687 KNLVQNLSYLTQLRSLSITNVLANHNRDLWSSIGKLKFLTRLAVSSRDDDEVLDLENFRA 746
Query: 556 EQHDISREITEAISNNVAFP 615
Q+ + ++NNV FP
Sbjct: 747 PQYLEKFYLDAKLANNVLFP 766
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 EAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQLTQID 396
+ I L++ E L ++ + +EK++DL+ + T E + ++
Sbjct: 1429 QKIHSLQKENEDLTRRNQLMEKELDLKTSQNKDENTNKQGNDANENGDSPVNE--VPELQ 1486
Query: 397 GTLTQIEAQ-REALEGANT-NAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 567
+ +E + EALE Q+ + M E +A K K+ D DK+ + ++ + +
Sbjct: 1487 SKIQLLETRLAEALEENKLYRGQLKSPMPEGKSASK-DGKENDDDKISQLESELKDMQE 1544
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 PGNMALRTKELPLQ-LSSGRRDTRSNLLK*MGPSLRLRPK 424
P + A+ TK+LP + ++S R TRS+ L + P +RL PK
Sbjct: 376 PASSAV-TKKLPKEPITSNIRLTRSDSLPVVSPRVRLNPK 414
>03_06_0059 + 31334842-31334868,31335064-31335330,31337162-31337344
Length = 158
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 417 GPKGSARRCQYQCPSIEHYARGS*CHEARTQRHRCGQST 533
G +G RRC + H A + A R CG ST
Sbjct: 35 GGRGGGRRCWAEAAEAAHMAAAAAHRAAAVHRAACGSST 73
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 376 KQLTQIDGTLTQIEAQREALEGANTNAQVLN-TMREAANA 492
K++ + T+TQ++ + LEG +TN + N +R+ A A
Sbjct: 1825 KKIEESSKTITQLQETLQRLEGKSTNLEAENQVLRQQATA 1864
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,212,930
Number of Sequences: 37544
Number of extensions: 316572
Number of successful extensions: 779
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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