Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_J17
(767 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 27 0.19
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 1.8
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 23 3.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.5
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 27.1 bits (57), Expect = 0.19
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +1
Query: 550 EMFLETIVKETYAFTSSNKRKVISKKDL 633
++FLE ++++ +T KRK ++ D+
Sbjct: 60 KVFLENVIRDAVTYTEHTKRKTVTAMDV 87
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 522 IARYNIYIWVHFHNVFNSRYRKLCR 448
I Y IYIW + ++RKL R
Sbjct: 543 IPGYMIYIWFTTSGTISEKFRKLIR 567
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 522 IARYNIYIWVHFHNVFNSRYRKLCR 448
I Y IYIW + ++RKL R
Sbjct: 596 IPGYMIYIWFTTSGTISEKFRKLIR 620
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 19 FYLNTVAVFLRITNLI 66
++LN +VF+RI NLI
Sbjct: 236 YFLNMASVFMRIFNLI 251
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 23.0 bits (47), Expect = 3.1
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 4 FCVLFFYLNTVAVFLRITNLIFYIWIQ*IKLLNKLFYSAIVKDYT*CILFVNFGLKDYI 180
F V+F Y+ +VAV +R + + +K++ + +KD CI+ + KD+I
Sbjct: 4 FLVIFVYILSVAVIIRANGI-----NEILKIM-----AVSMKDIRYCIIHMGLTFKDFI 52
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 22 YLNTVAVFLRITNLI 66
+LN +VF+RI NLI
Sbjct: 269 FLNMASVFMRIFNLI 283
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Query: 403 EEQV 414
EQ+
Sbjct: 116 IEQI 119
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 289 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
Query: 403 EEQV 414
EQ+
Sbjct: 349 IEQI 352
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/64 (21%), Positives = 26/64 (40%)
Frame = +1
Query: 223 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNS 402
+RKY+ +S + E I ++ S N + + + NKL + +N
Sbjct: 289 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
Query: 403 EEQV 414
EQ+
Sbjct: 349 IEQI 352
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 36 SCFFTNYKLNFLYLDSVN 89
S FTNYKL + Y V+
Sbjct: 561 SAVFTNYKLYWRYWQGVD 578
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,028
Number of Sequences: 438
Number of extensions: 3515
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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