Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_J12
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49131-4|CAA88977.2|  263|Caenorhabditis elegans Hypothetical pr...   175   2e-44

>Z49131-4|CAA88977.2|  263|Caenorhabditis elegans Hypothetical
           protein ZC373.5 protein.
          Length = 263

 Score =  175 bits (427), Expect = 2e-44
 Identities = 86/197 (43%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
 Frame = +1

Query: 139 ELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXXXXXXXXXXX 318
           EL  QFY LGW+ G+GG +    G ++ I+PS +QKER++  D+FV  +           
Sbjct: 35  ELMIQFYKLGWMRGSGGAMGCISGSELMISPSALQKERIREQDVFVYNMKDKTEVQRPPN 94

Query: 319 XXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCT-LLYDKVFEITHQEMIKGIKDTSL 495
                S C+ LF L  +   +  VIHTHS  A   T L+   VFEI+HQE IKGI D   
Sbjct: 95  KRITVSSCSVLFSLIMKETGSECVIHTHSKCANLITQLIKSNVFEISHQEYIKGIYDPFS 154

Query: 496 GRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYVWGDTWQQAKT 675
           G+ L+Y + L +PII+N P E  L   +   L+ YP   AVLVR HG++VWG TW+  K 
Sbjct: 155 GKALKYSDTLTIPIIDNMPSESQLLEPIRGVLENYPQAIAVLVRNHGLFVWGPTWESTKI 214

Query: 676 MTECYDYLFEMAVEMKK 726
           MTEC DYL E+++EM K
Sbjct: 215 MTECIDYLLELSIEMLK 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,848,632
Number of Sequences: 27780
Number of extensions: 320055
Number of successful extensions: 674
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)