BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_J03
(689 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 25 0.77
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 25 0.77
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 24 1.3
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 1.8
EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 23 2.4
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 5.4
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 5.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 7.2
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 9.5
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 9.5
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 21 9.5
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +2
Query: 494 RNLWKRFRMDGRQIQRRPLTSTSRQIMKYYLTKNLW*IQVELKVHQ 631
+N+W RF++ Q+ P+ + ++ Y L W + + + + Q
Sbjct: 151 KNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQ 196
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 24.6 bits (51), Expect = 0.77
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +2
Query: 494 RNLWKRFRMDGRQIQRRPLTSTSRQIMKYYLTKNLW*IQVELKVHQ 631
+N+W RF++ Q+ P+ + ++ Y L W + + + + Q
Sbjct: 151 KNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQ 196
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 613 YLDLPKILRQVIFHYLSACRGQRAPLYLSPIHSKALPKI 497
YLD ++ + + GQ APLY S I + K+
Sbjct: 202 YLDFINVMAYDLHGSWESVTGQNAPLYASSIDVEGSQKL 240
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 592 ESLVNPSRIESASE 633
ESL NPSR++S E
Sbjct: 55 ESLTNPSRLDSGKE 68
>EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive
peptide receptor 2 protein.
Length = 354
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 79 KCKILRIKKRITYYYFFVI*QYKYIIFTNFQITG 180
+ KI +K + + FV+ YI+F Q+ G
Sbjct: 279 RAKIKTVKMTLVIVFVFVLCWSPYIVFDLLQVYG 312
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 553 LDKPTDNEILLDEESLVNPSRIES 624
L P E+LLDE P RI+S
Sbjct: 256 LTTPLSEEVLLDELLRHFPERIQS 279
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 186 KFSSNLKIGKNNVFVLSNHKKIVI 115
KF+ NLK G+N + S+ + I
Sbjct: 529 KFTVNLKQGQNTITRASSQSSVTI 552
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3
Query: 204 SQASWPKFSSNLKIGKNNVFV 142
+ W + S+N+K+G+N V +
Sbjct: 1532 TSTEWIQVSNNVKLGQNFVLL 1552
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 37 IKQKCQLSNLNYTN 78
IKQ C+L+N +Y N
Sbjct: 202 IKQVCKLNNGHYKN 215
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 31 LTIKQKCQLSNLNYTNKCKILRI 99
+TI + N N+T KC LR+
Sbjct: 38 ITINIRKNGLNYNFTKKCYFLRM 60
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory
receptor candidate 25 protein.
Length = 314
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 37 IKQKCQLSNLNYTN 78
IKQ C+L+N +Y N
Sbjct: 27 IKQVCKLNNGHYKN 40
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,916
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -