Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_J03
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-42|AAU87806.2|  544|Caenorhabditis elegans Acetylcholin...    30   1.4  
Z69662-6|CAA93501.1|  283|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol ...    27   9.6  
U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol ...    27   9.6  
U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol ...    27   9.6  
U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol ...    27   9.6  
U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol ...    27   9.6  
AC024800-2|AAF60723.2|  320|Caenorhabditis elegans Serpentine re...    27   9.6  
AC024800-1|AAF60725.1|  320|Caenorhabditis elegans Serpentine re...    27   9.6  

>AC084197-42|AAU87806.2|  544|Caenorhabditis elegans Acetylcholine
           receptor protein 25 protein.
          Length = 544

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = -2

Query: 649 LVTMSILMHFQFYLDLPKILRQVIFHYLSACRGQRAPLYLSPIHSKALPKIATLFFKIC 473
           L+TM  L+ F F  D  + +   I   LS C  Q     LSP  S+A+P ++  FF +C
Sbjct: 245 LITMLTLVGFTFPPDAGEKMSLQITIMLSICIFQNYVAELSPPTSEAVPFLSA-FFAVC 302


>Z69662-6|CAA93501.1|  283|Caenorhabditis elegans Hypothetical
           protein F56D5.10 protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 113 PITIFL*FDNTNTLFLPIFRLLENFGQLAWLEYV-NEFKTTKSEI 244
           PIT+F    N   +++PI  ++ N G L + +Y+ N +K+T S I
Sbjct: 140 PITLF---QNNFLIYVPIVSMVVNSGILIYQKYLRNRWKSTASSI 181


>U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform e protein.
          Length = 919

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 476 YFEK*CRNLWKRFRM--DGRQIQ 538
           +FE+ C++LWKR  +  DGR I+
Sbjct: 727 FFERTCKDLWKRIELEVDGRIIE 749


>U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform b protein.
          Length = 952

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 476 YFEK*CRNLWKRFRM--DGRQIQ 538
           +FE+ C++LWKR  +  DGR I+
Sbjct: 760 FFERTCKDLWKRIELEVDGRIIE 782


>U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform d protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 476 YFEK*CRNLWKRFRM--DGRQIQ 538
           +FE+ C++LWKR  +  DGR I+
Sbjct: 604 FFERTCKDLWKRIELEVDGRIIE 626


>U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform a protein.
          Length = 950

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 476 YFEK*CRNLWKRFRM--DGRQIQ 538
           +FE+ C++LWKR  +  DGR I+
Sbjct: 758 FFERTCKDLWKRIELEVDGRIIE 780


>U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform c protein.
          Length = 794

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +2

Query: 476 YFEK*CRNLWKRFRM--DGRQIQ 538
           +FE+ C++LWKR  +  DGR I+
Sbjct: 602 FFERTCKDLWKRIELEVDGRIIE 624


>AC024800-2|AAF60723.2|  320|Caenorhabditis elegans Serpentine
           receptor, class h protein305 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 39  QTEVSIVKFKLHK*MQNITH*KTNYLLLFFCDLTIQIH 152
           Q+++S VKFK+ +    I +   NYL  F   ++  IH
Sbjct: 129 QSQISTVKFKIKRKETRILYYAANYLFSFTVMVSFYIH 166


>AC024800-1|AAF60725.1|  320|Caenorhabditis elegans Serpentine
           receptor, class h protein57 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 39  QTEVSIVKFKLHK*MQNITH*KTNYLLLFFCDLTIQIH 152
           Q+++S VKFK+ +    I +   NYL  F   ++  IH
Sbjct: 129 QSQISTVKFKIKRKETRILYYAANYLFSFTVMVSFYIH 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,339,822
Number of Sequences: 27780
Number of extensions: 318743
Number of successful extensions: 711
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)