Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I19
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.75 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.3  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 90  FCGHALISIVWILTILDYIIFIEIIS*LL 4
           FC    +  VWI T ++   FIE I+ L+
Sbjct: 82  FCASIYVGTVWINTSINGTKFIEFINKLI 110


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 664 YFMMYKLLCAL*INITFIK 608
           YF+   LLC++ +NI FIK
Sbjct: 397 YFVF--LLCSILVNIAFIK 413


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 393 FHIIHFCA**SKLCLFVYYDCNTVL 319
           FH+I+     S  C   Y+ CNTV+
Sbjct: 141 FHLIYEAHGFSYKCGIQYHICNTVI 165


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 393 FHIIHFCA**SKLCLFVYYDCNTVL 319
           FH+I+     S  C   Y+ CNTV+
Sbjct: 137 FHLIYEAHGFSYKCGIQYHICNTVI 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,204
Number of Sequences: 336
Number of extensions: 3005
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)