Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I19
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical...   158   4e-39
AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical...   157   5e-39
AL034488-9|CAA22453.3|  134|Caenorhabditis elegans Hypothetical ...    54   7e-08
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z82282-6|CAB05273.1|  147|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3a protein.
          Length = 129

 Score =  158 bits (383), Expect = 4e-39
 Identities = 74/125 (59%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
 Frame = +1

Query: 103 ATVRAVKK--RILPSRAALVLTPSAVKKVKEIMQKEEAKGYVGLKVGVRQRGCNGLSYTL 276
           AT + +K   ++  +RAAL LT  AV +++ ++ ++       LK+GVRQ+GCNGL+YTL
Sbjct: 7   ATAKVIKGALKVRQTRAALTLTNEAVSRIRVLLAQQNDAN--ALKIGVRQKGCNGLTYTL 64

Query: 277 DYAKTKEKLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTCGCG 456
           +YAK K+K DEEV+QDG+ + I+ KAQL+LLG+EMDYV DKLS+EFVF NPNIKGTCGCG
Sbjct: 65  EYAKDKQKFDEEVEQDGIKVWIEPKAQLSLLGSEMDYVTDKLSSEFVFRNPNIKGTCGCG 124

Query: 457 ESFSI 471
           ESFSI
Sbjct: 125 ESFSI 129


>AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3b protein.
          Length = 131

 Score =  157 bits (382), Expect = 5e-39
 Identities = 74/119 (62%), Positives = 94/119 (78%)
 Frame = +1

Query: 115 AVKKRILPSRAALVLTPSAVKKVKEIMQKEEAKGYVGLKVGVRQRGCNGLSYTLDYAKTK 294
           A+K R    RAAL LT  AV +++ ++ ++       LK+GVRQ+GCNGL+YTL+YAK K
Sbjct: 15  ALKVRQTSFRAALTLTNEAVSRIRVLLAQQNDAN--ALKIGVRQKGCNGLTYTLEYAKDK 72

Query: 295 EKLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTCGCGESFSI 471
           +K DEEV+QDG+ + I+ KAQL+LLG+EMDYV DKLS+EFVF NPNIKGTCGCGESFSI
Sbjct: 73  QKFDEEVEQDGIKVWIEPKAQLSLLGSEMDYVTDKLSSEFVFRNPNIKGTCGCGESFSI 131


>AL034488-9|CAA22453.3|  134|Caenorhabditis elegans Hypothetical
           protein Y54G11A.9 protein.
          Length = 134

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
 Frame = +1

Query: 79  MTTKI--IASATVRAVKKRILPSRAALVLTPSAVKKVKEIMQKEEAKGYVGLKVGVRQRG 252
           +T KI  + + TV     R+L  +   V T  A  ++KE++   E      L++ V   G
Sbjct: 2   LTQKIGRLMACTVTRQAHRMLTEQEIKV-TNKAASRLKEVVDNGER-----LRLEVDGGG 55

Query: 253 CNGLSYT--LDYAKTKEKLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEF-VFN 423
           C+G  Y   LD     + L  +  ++G  I++D+ +   L G  +D+VED + + F + N
Sbjct: 56  CSGFEYKIRLDKKINNDDLLWKSSENGAEIVVDELSLGFLKGATVDFVEDLMKSSFRIVN 115

Query: 424 NPNIKGTCGCGESFS 468
           NP  +  C CG SF+
Sbjct: 116 NPIAEKGCSCGSSFA 130


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 298 KLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTC 447
           K D + + DGV + I +K    ++ T  D        EF F N N    C
Sbjct: 65  KRDVDFESDGVKVQIREKRSTMVIVTRDDVTNSTTIREFAFQNVNTTERC 114


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 298 KLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTC 447
           K D + + DGV + I +K    ++ T  D        EF F N N    C
Sbjct: 65  KRDVDFESDGVKVQIREKRSTMVIVTRDDVTNSTTIREFAFQNVNTTERC 114


>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 277 DYAKTKEKLDEEVKQDGVT---IIIDKKAQLTLLGTEMDYVEDKLSAEF 414
           DY +  EKL+E VK++ +    I+ ++  ++T L  +   +E K+S +F
Sbjct: 571 DYVRKIEKLEENVKEEQMNTEMIMKERTREITELYYQKRVLEKKISEQF 619


>Z82282-6|CAB05273.1|  147|Caenorhabditis elegans Hypothetical
           protein T07G12.8 protein.
          Length = 147

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 588 FILIYYSLNISTNYTILL*NFKLQ 517
           FIL +Y + I  NY +LL N K Q
Sbjct: 57  FILFFYKIKIFMNYQLLLRNRKFQ 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,304,296
Number of Sequences: 27780
Number of extensions: 255006
Number of successful extensions: 608
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)