Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I11
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    49   5e-08
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       42   4e-06
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   6.1  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 34/108 (31%), Positives = 51/108 (47%)
 Frame = +3

Query: 15  ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
           +S     A L Q  +      + + S+     E  YT+ E E L +I  + KFR Y+   
Sbjct: 607 SSGYGLGAELYQIQEDGSRGVIAFASRSLRGPELNYTTTEKELLGVIFALHKFRIYIQVT 666

Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKM 338
              I TD +A +  L++  L +S R+ RW L L  YD+ IE  +G  M
Sbjct: 667 KIIIRTDHQALKF-LSRCRL-LSERLTRWTLILGQYDYEIELVKGKGM 712


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 42.3 bits (95), Expect = 4e-06
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 525 CLVVPQKMEIEIIKRAHDN-GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASR 701
           CL +P+ + I+++   H   GHF   K    + ++YY P + + I+  + +C  C     
Sbjct: 121 CLAIPESLVIKLVDYHHQLLGHFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLCQKTKS 180

Query: 702 KEGKREGFLNPI 737
                +G L PI
Sbjct: 181 SNRPHQGPLTPI 192


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 472 YIMTFICKEDYSARDHNIVWLYHRRWKLKLLR 567
           Y ++ +C+   +    NI+ L HRR+++  LR
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLMHRRFEITALR 297


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 144 LAIIECIKKFRHYLYGKHF 200
           LA I C     +Y+Y KH+
Sbjct: 3   LAYIACFLLLLYYIYSKHY 21


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 595 RRKQWN*LIRIITYQN*RKRLRIILL 672
           +RK+WN L + +T+   RK   + L+
Sbjct: 158 KRKKWNLLFKTLTHDEPRKSSLVQLI 183


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 595 RRKQWN*LIRIITYQN*RKRLRIILL 672
           +RK+WN L + +T+   RK   + L+
Sbjct: 84  KRKKWNLLFKTLTHDEPRKSSLVQLI 109


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 173 KLLYTFYYSQSF*LITCIF 117
           +L + FYY+    +I CIF
Sbjct: 151 QLYFQFYYTYFLCVIVCIF 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,178
Number of Sequences: 336
Number of extensions: 4057
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)