Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_I11
(763 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 223 2e-58
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 211 7e-55
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 196 3e-50
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 142 4e-34
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 83 3e-16
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 82 9e-16
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 81 2e-15
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 78 1e-14
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 77 2e-14
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 75 8e-14
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 74 2e-13
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 74 2e-13
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 70 3e-12
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 70 3e-12
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 68 1e-11
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 68 1e-11
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 67 3e-11
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 67 3e-11
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 65 9e-11
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 62 8e-10
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 62 1e-09
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 57 2e-08
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 56 5e-08
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 52 1e-06
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 49 6e-06
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 49 6e-06
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 49 6e-06
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 49 6e-06
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 49 6e-06
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 49 6e-06
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 49 6e-06
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 48 1e-05
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 32 0.98
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 31 1.3
AY089438-1|AAL90176.1| 406|Drosophila melanogaster AT25567p pro... 29 5.2
AE014297-3563|AAF56309.1| 406|Drosophila melanogaster CG6607-PA... 29 5.2
AY047575-1|AAK77307.1| 428|Drosophila melanogaster GH08670p pro... 29 6.9
AE014298-722|AAG22407.2| 428|Drosophila melanogaster CG4202-PA ... 29 6.9
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 223 bits (545), Expect = 2e-58
Identities = 115/251 (45%), Positives = 164/251 (65%), Gaps = 3/251 (1%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A+LLQK + S HPV + S++TT AES SY LE A +KKFRHYL G
Sbjct: 485 ASKDGLGAVLLQKFEGS-FHPVCFWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGV 543
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
FK+VTDC AF+ T K D+ V WIL++QD++F EHR G +M+H D LSR+P
Sbjct: 544 PFKLVTDCVAFKQTTKKADVPRE--VGPWILYMQDFNFQPEHRAGERMRHVDFLSRHPQA 601
Query: 375 AL-IFSDLHSDLRRAQESDNGLNAIMNILRDGKLYNDFYLQGGLLCK--GPQHCLVVPQK 545
+ I S+L + ++++Q++D+ + AI+ IL+D +L+ + L+GGLL LVVP
Sbjct: 602 CMMITSELTARIKKSQQNDDSIRAILEILKD-RLFQPYKLKGGLLYSMVNGNELLVVPAL 660
Query: 546 MEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEGKREGF 725
ME E+I+ AH+ GH S +KTM I + ++IP LE K++ I+ CI C++ S+K GK+EG+
Sbjct: 661 MEREVIQSAHEVGHLSLQKTMHSIQQQFFIPHLEYKVKKLISNCIKCIIHSKKLGKQEGY 720
Query: 726 LNPIEKGDTPL 758
LN I+KGD PL
Sbjct: 721 LNCIDKGDAPL 731
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 211 bits (516), Expect = 7e-55
Identities = 113/252 (44%), Positives = 161/252 (63%), Gaps = 4/252 (1%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A+LLQK + S HPV + S++TT AES SY LE A +KKFRHYL G
Sbjct: 791 ASKDGLGAVLLQKFEGS-FHPVCFWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGV 849
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
FK+VTDC AF+ T K D + V WIL++QD++F EHR G +M+H D LSR+P
Sbjct: 850 PFKLVTDCVAFKQTTKKAD--VPREVGPWILYMQDFNFQPEHRAGERMRHVDFLSRHPQA 907
Query: 375 A-LIFSDLHSDLRRAQESDNGLNAIMNILRDGKLYNDFYLQGGLLCK--GPQHCLVVPQK 545
+I S+L + ++++Q++D+ + AI+ IL+D +L+ + L+GGLL LVVP
Sbjct: 908 CMMITSELTARIKKSQQNDDSIRAILEILKD-RLFQPYKLKGGLLYSMVNGNELLVVPAL 966
Query: 546 MEIEIIKRAHDNGHFSKKKTMELINKD-YYIPKLEKKIEDYIATCIPCLLASRKEGKREG 722
ME E+I+ AH+ GH S +KTM I + +Y E K++ I+ CI C++ S+K GK+EG
Sbjct: 967 MEREVIQSAHEVGHLSLQKTMHSIQQQFFYFLIWEYKVKKLISNCIKCIIHSKKLGKQEG 1026
Query: 723 FLNPIEKGDTPL 758
+LN I+KGD PL
Sbjct: 1027 YLNCIDKGDAPL 1038
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 196 bits (478), Expect = 3e-50
Identities = 107/254 (42%), Positives = 156/254 (61%), Gaps = 7/254 (2%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
ASS + A+L+QK + + HPV + SKRTTD ESKY S+ELE LAI+ +++FR YL+ +
Sbjct: 1019 ASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDIESKYHSFELETLAIVYSLRRFRVYLHWR 1078
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
FKIVTDC + +TL+KK+L + R+ARW L Q YDF I HR GS+M+H DALSR +
Sbjct: 1079 TFKIVTDCNSLILTLSKKEL--NPRIARWALEFQGYDFEIVHRAGSRMQHVDALSRCTNI 1136
Query: 375 ALIFSDLHSD-LRRAQESDNGLNAIMNILR--DGKLYNDFYLQGGLLCKGPQH---CLVV 536
+I ++ D L Q D L I +L + KLY ++ G++ K V
Sbjct: 1137 MVIQTNSFEDNLVICQGKDTKLKEIRQLLENTENKLYE---MRNGIVYKKTNENRLLFYV 1193
Query: 537 PQKMEIEIIKRAHDN-GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEGK 713
P +ME +++ + H+ GH + K +E I K+Y+ P L++K +I+ C+ C+ S K GK
Sbjct: 1194 PIEMEEQVLYKYHNELGHVGRDKMIEAIMKNYWFPNLKQKCSTHISNCLKCISFSPKTGK 1253
Query: 714 REGFLNPIEKGDTP 755
EGFL+ I KG+ P
Sbjct: 1254 TEGFLHNIPKGNKP 1267
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 142 bits (345), Expect = 4e-34
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 25/272 (9%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ Y AILL + +S H + Y SK TT ES+Y SYELE LA+++ +K FRHYL G+
Sbjct: 748 ASACGYGAILLHRIESKP-HVIEYFSKTTTSVESRYHSYELETLAVVKAVKHFRHYLIGR 806
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNP-- 368
F + TDC + + + K DL + RV RW +LQ ++F I++REG +M H D LSRNP
Sbjct: 807 EFVVYTDCNSLKASRTKIDL--TPRVHRWWAYLQSFNFEIQYREGKRMAHVDFLSRNPLS 864
Query: 369 --YVALI---------FSDLHSD-LRRAQESDNGLNAIMNILRDGKLYND----FYLQGG 500
++ I S++ S L Q D + I+N L +L + + L+ G
Sbjct: 865 PEHILSINKIPEKRVNLSEISSTWLLAEQRLDLEIIEIVNKLESDELAENLAKTYDLRKG 924
Query: 501 LLCKGPQ------HCLVVPQKMEIEIIKRAHDN-GHFSKKKTMELINKDYYIPKLEKKIE 659
+L + Q + VVP+ + +I + H++ H +KT++ + + Y+ K+ K +
Sbjct: 925 VLYRKVQRRGRTSYLPVVPRAFKWSVINQVHESIMHLGWQKTLDKVYQYYWFAKMNKYVR 984
Query: 660 DYIATCIPCLLASRKEGKREGFLNPIEKGDTP 755
+++ CI C GK + L+ I K P
Sbjct: 985 KFVSNCITCRSVKSSSGKVQAELHSIPKTSIP 1016
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 83.4 bits (197), Expect = 3e-16
Identities = 46/116 (39%), Positives = 71/116 (61%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L Q S+ PV + S+ + AE+ Y++ E E LAII ++ FR YL+G+
Sbjct: 510 ASNFAIGAVLSQGPVHSD-RPVCFASRTLSAAETNYSTIEKEMLAIIWAVQYFRPYLFGR 568
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
F I+TD K +N K ++++ RW L LQ+YDF + +++GS+ DALSR
Sbjct: 569 RFTIITDHKPLTWLMNFKQ--PNSKIVRWRLQLQEYDFEVVYKKGSQNVIADALSR 622
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 81.8 bits (193), Expect = 9e-16
Identities = 47/116 (40%), Positives = 69/116 (59%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L Q ++ PV + S+ +D E Y++ E E LAII +K FR Y+YG
Sbjct: 623 ASNFALGAVLSQGSLQND-RPVCFASRTLSDTEVNYSTIEKEMLAIIWAVKYFRPYIYGV 681
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
F IVTD K +N K+ ++++ RW L L +Y+F I H++GS+ DALSR
Sbjct: 682 KFTIVTDHKPLIWLMNFKE--PNSKIIRWRLQLMEYNFEIIHKKGSQNVIADALSR 735
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 507 CKGPQHCLVVPQKMEIEIIKRAHDNG-HFSKKKTMELINKDYYIPKLEKKIEDYIATCIP 683
CK H +V + + I+ H N H +T + ++ Y P ++ KI + I C
Sbjct: 844 CKSLLH-EIVGNPEQNKFIQEYHTNSNHRGIDETFLHLKRETYFPNMKNKISELIRNCET 902
Query: 684 CL 689
CL
Sbjct: 903 CL 904
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 81.0 bits (191), Expect = 2e-15
Identities = 54/169 (31%), Positives = 88/169 (52%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS++A A+L S + HP+ Y+S+ D E+ Y++ E E LAI+ K FRHYL G+
Sbjct: 462 ASNVALGAVL-----SQDGHPISYISRTLNDHETNYSTIEKELLAIVWATKTFRHYLLGR 516
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
HF+I +D + K+ + ++ RW L +YDF I++ +G + DALSR
Sbjct: 517 HFEIASDHQPLCWLHKMKE--PNAKLTRWKFRLAEYDFDIKYVKGKENHVADALSRITIE 574
Query: 375 ALIFSDLHSDLRRAQESDNGLNAIMNILRDGKLYNDFYLQGGLLCKGPQ 521
F++ + AQE + L ++ K N++ Q + KGP+
Sbjct: 575 EAFFTE--ATQHSAQEDNQNLISLTE-----KAVNNYNRQ-VIFTKGPE 615
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 78.2 bits (184), Expect = 1e-14
Identities = 47/139 (33%), Positives = 76/139 (54%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS +A A+L S + HP+ Y+S+ + E Y++ E E LAI+ K FRHYL G+
Sbjct: 515 ASDVALGAVL-----SQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGR 569
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
HF+I +D + KD ++++ RW + L ++DF I++ +G + DALSR +
Sbjct: 570 HFEISSDHQPLSWLYRMKD--PNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR---I 624
Query: 375 ALIFSDLHSDLRRAQESDN 431
L + L + + E DN
Sbjct: 625 KLEETYLSEQTQHSAEEDN 643
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 77.4 bits (182), Expect = 2e-14
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L S E P+ ++S+ + AE Y + E E LAII +KK + YLYGK
Sbjct: 514 ASNFAVGAVL-----SQENRPISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGK 568
Query: 195 -HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPY 371
KI TD + +L+ + + R+ RW +L++YD+ I ++ G + DALSR P
Sbjct: 569 AKVKIFTDHQPLTHSLSSWN--GNARIKRWKAYLEEYDYEIFYKPGRENTVADALSRGPT 626
Query: 372 VALIFSDLHSDLRRAQESDNGL 437
V I + + S + + S +GL
Sbjct: 627 VEQI-NTVASTMHSSDSSSHGL 647
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 429 NGLNAIMNILRDGKLYNDFYLQGGLL--CKGPQHCLVVPQKMEIEIIKRAHDNGHFSKKK 602
NG+ +++ ++ + QG + C+ LV + E EI+ R H+ H + +
Sbjct: 710 NGIFTSEDVMGKIQILYPIHFQGFKIRFCQSKVKDLVNEAEQEEEIL-RTHNRAHRNAVE 768
Query: 603 TMELINKDYYIPKLEKKIEDYIATCIPCLLA 695
+++ Y PK+ KK+ + C+ C A
Sbjct: 769 NKAQLSERVYFPKMRKKVSAIVNQCLVCKTA 799
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 75.4 bits (177), Expect = 8e-14
Identities = 46/141 (32%), Positives = 76/141 (53%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS++A A+L S + HP+ Y+S+ + E Y++ E E LAI+ K FRHYL G+
Sbjct: 477 ASNVALGAVL-----SQDGHPISYISRTLNEHEVNYSAIEKELLAIVWATKTFRHYLLGR 531
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
H +I +D + K+ ++++ RW + L +YDF I++ +G + DALSR
Sbjct: 532 HCEIASDHQPLCWLHKLKE--PNSKLTRWKIRLSEYDFDIKYIKGKENHVADALSRIKIE 589
Query: 375 ALIFSDLHSDLRRAQESDNGL 437
F + S A+E ++ L
Sbjct: 590 QAFFGE--STQHSAEEDNSDL 608
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 74.1 bits (174), Expect = 2e-13
Identities = 44/116 (37%), Positives = 64/116 (55%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + +L PV Y S+ T ES ++ E E AI I FR Y+YGK
Sbjct: 377 ASKQACGAVLTQDHNGQQL-PVAYASRMFTQGESNKSTTEQELTAIHWAINHFRPYIYGK 435
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF + +D + + K+ S+++ R L L++YDFT+E+ +G DALSR
Sbjct: 436 HFMVKSDHRPLSYLFSMKN--PSSKLTRMRLDLEEYDFTVEYLKGKDNHIADALSR 489
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 555 EIIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPC 686
EI+ + HD+ GH +T I + YY P++ K I Y+ TC+ C
Sbjct: 653 EILTKFHDDPIEGGHTGISRTQSKIKRFYYWPQMTKTISKYVKTCLKC 700
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 73.7 bits (173), Expect = 2e-13
Identities = 41/116 (35%), Positives = 64/116 (55%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS++A A+L Q HP+ ++S+ D E Y++ E E LAI+ K FRHYL G+
Sbjct: 514 ASNLALGAVLSQNG-----HPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGR 568
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
F I +D + + N K+ ++ RW + L +Y F I++ +G + DALSR
Sbjct: 569 QFLIASDHQPLRWLHNLKE--PGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 70.1 bits (164), Expect = 3e-12
Identities = 44/116 (37%), Positives = 62/116 (53%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + +L P+ Y S+ T ES ++ E E AI I FR Y+YGK
Sbjct: 211 ASKQACGAVLTQNRNGIQL-PIAYASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGK 269
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF I TD + + + S+++ R L L++YDFT+E+ G DALSR
Sbjct: 270 HFTIKTDHRPLTYLFSMTN--PSSKLTRMRLELEEYDFTVEYLRGKDNFVADALSR 323
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 519 QHCLVVPQKMEIE-IIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIP 683
Q ++ + EI+ I+ HD+ GH +T+ I + YY + + I++YI C
Sbjct: 471 QPVTIIKTEKEIQSILSTYHDDLIQGGHTGITRTLAKIKRHYYWKNMTRHIKEYIRRCHK 530
Query: 684 CLLA 695
C ++
Sbjct: 531 CQMS 534
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 70.1 bits (164), Expect = 3e-12
Identities = 44/116 (37%), Positives = 62/116 (53%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + +L P+ Y S+ T ES ++ E E AI I FR Y+YGK
Sbjct: 211 ASKQACGAVLTQNRNGIQL-PIAYASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGK 269
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF I TD + + + S+++ R L L++YDFT+E+ G DALSR
Sbjct: 270 HFTIKTDHRPLTYLFSMTN--PSSKLTRMRLELEEYDFTVEYLRGKDNFVADALSR 323
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 519 QHCLVVPQKMEIE-IIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIP 683
Q ++ + EI+ I+ HD+ GH +T+ I + YY + + I++YI C
Sbjct: 471 QPVTIIKTEKEIQSILSTYHDDPIQGGHTGITRTLAKIKRHYYWKNMTRHIKEYIRRCHK 530
Query: 684 CLLA 695
C ++
Sbjct: 531 CQMS 534
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 68.1 bits (159), Expect = 1e-11
Identities = 44/116 (37%), Positives = 64/116 (55%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + +L PV Y S+ T ES ++ E E AI I FR Y+YGK
Sbjct: 622 ASKQACGAVLTQNHNGHQL-PVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGK 680
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF + TD + +T + S+++ R L L++Y+FT+E+ +G DALSR
Sbjct: 681 HFTVKTDHR--PLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALSR 734
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 540 QKMEIEIIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPC 686
+K + I+ HD+ GH KT+ + + YY + K I++Y+ C C
Sbjct: 890 EKEKEAILSTLHDDPIQGGHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKC 942
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 68.1 bits (159), Expect = 1e-11
Identities = 44/116 (37%), Positives = 64/116 (55%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + +L PV Y S+ T ES ++ E E AI I FR Y+YGK
Sbjct: 385 ASKQACGAVLTQNHNGHQL-PVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGK 443
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF + TD + +T + S+++ R L L++Y+FT+E+ +G DALSR
Sbjct: 444 HFTVKTDHR--PLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALSR 497
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 540 QKMEIEIIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPC 686
+K + I+ HD+ GH KT+ + + YY + K I++Y+ C C
Sbjct: 653 EKEKEAILSTLHDDPIQGGHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKC 705
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 66.9 bits (156), Expect = 3e-11
Identities = 40/116 (34%), Positives = 64/116 (55%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + +L PV Y S+ T ES ++ E E AI I FR Y+YG+
Sbjct: 9 ASKQACGAVLSQDHNGQQL-PVAYASRSFTKGESNKSTTEQELAAIHWAINHFRPYVYGR 67
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF + +D + + ++ S+++ R L L++++FT+E+ +G DALSR
Sbjct: 68 HFLVQSDHRPLSYLFSMRN--PSSKLTRMRLDLEEFEFTVEYLKGKDNHVADALSR 121
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 543 KMEIE-IIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPC 686
K++I+ I+ + HD+ GH +T+ + P++ K I +Y+ TC+ C
Sbjct: 277 KVQIKAILSKYHDDPSEGGHSGISRTLRKMKNCCCWPRMTKAISEYVETCLKC 329
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 66.9 bits (156), Expect = 3e-11
Identities = 40/123 (32%), Positives = 65/123 (52%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS++A A+L Q PV Y S+ + E Y + E E LAI+ K FR YL+G+
Sbjct: 588 ASNVAIGAVLSQNHK-----PVCYASRTLNEHEINYATIEKELLAIVWATKYFRSYLFGR 642
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYV 374
F++++D K N K+ M ++ RW + L ++D+ I++ G + DALSR
Sbjct: 643 PFEVLSDHKPLVWLNNIKEPNM--KLQRWKIKLNEFDYKIKYLPGKENHVADALSRTKIE 700
Query: 375 ALI 383
++
Sbjct: 701 VMV 703
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 558 IIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLA 695
I+K+ + H +KT+ L ++YY P +K I+ I C C LA
Sbjct: 834 ILKKHKELLHPGIEKTINLFKEEYYYPDSQKLIQTIINECQICYLA 879
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 65.3 bits (152), Expect = 9e-11
Identities = 42/116 (36%), Positives = 63/116 (54%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS A A+L Q + L PV Y S+ T ES ++ E E AI I F+ Y+YG+
Sbjct: 516 ASKEACGAVLTQNYNGIHL-PVAYASRSFTKGESNKSTTEQELSAIHWAINHFKPYIYGR 574
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
HF + TD + +T + S+++ R L L++Y+FT+E+ +G DALSR
Sbjct: 575 HFTVKTDHR--PLTYLFSMVNPSSKLTRMRLDLEEYEFTVEYLKGKDNYVADALSR 628
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 62.1 bits (144), Expect = 8e-10
Identities = 39/116 (33%), Positives = 63/116 (54%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L S E P+ Y S+ + E Y++ E E LAI+ K FR YL+G+
Sbjct: 503 ASNFAIGAVL-----SQEHKPICYASRTLNEHEVNYSAIEKELLAIVWATKYFRSYLFGR 557
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
F+I +D + + K+ M ++ RW + L ++D+ I++ G + DALSR
Sbjct: 558 KFEIHSDHRPLVWLDSIKEPNM--KLQRWKIKLNEFDYHIKYLPGKENHVADALSR 611
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 61.7 bits (143), Expect = 1e-09
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L Q DD P+ Y+S+ E Y + E E LAII + R YLYG
Sbjct: 441 ASNWAIGAVLSQ-DDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGA 499
Query: 195 -HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNP 368
K+ TD + L ++ + ++ RW +++Y+ + ++ G DALSR P
Sbjct: 500 GTIKVYTDHQPLTFALGNRN--FNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRIP 556
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/116 (31%), Positives = 60/116 (51%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L+Q + + Y S+ + E Y++ E E LAI K F++Y+YG+
Sbjct: 440 ASNYALGAVLMQDNKV-----ISYASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYGR 494
Query: 195 HFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
F I TD + N K+ + ++ RW + L ++DF I +G + D LSR
Sbjct: 495 KFIIKTDHRPLVWLNNLKE--PNLKLQRWKVQLNEFDFDITFIKGKENALADGLSR 548
Score = 35.5 bits (78), Expect = 0.080
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 552 IEIIKRAH-DNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLA 695
++II+ H N H + I + YY PK++K I++YI C C LA
Sbjct: 731 LKIIENEHIKNNHRGINEIFISIREKYYYPKMQKFIQNYINNCKICNLA 779
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 56.0 bits (129), Expect = 5e-08
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S + PV +S+ D E + + E E LAI+ +K R+YLYG K+ I TD + +T
Sbjct: 517 SQDGKPVTMISRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQ--PLT 574
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
D + ++ RW F+ +++ I ++ G + DALSR
Sbjct: 575 YAVSDRNPNAKIKRWKAFIDEHNAKIFYKPGKETYVADALSR 616
Score = 31.9 bits (69), Expect = 0.98
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +3
Query: 540 QKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPC 686
Q + EI+ H+ H + ++ ++ I + Y+ PK+ + +++ C+ C
Sbjct: 741 QTEQREIVSLEHNRAHRAAQENVKQILQYYFFPKMSQIAATFVSNCLVC 789
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 51.6 bits (118), Expect = 1e-06
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ +D E Y + E E LAI+ + K RHYLY K I TD +
Sbjct: 488 SQEGRPITMISRTLSDREVNYATNERELLAIVWALAKLRHYLYAVKEINIFTDHQPLTFA 547
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSR 362
+++ + + ++ RW + + I ++ G DALSR
Sbjct: 548 VSESN--PNAKIKRWKARIDESGARIFYKPGRNNLVADALSR 587
Score = 34.3 bits (75), Expect = 0.18
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 555 EIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLA 695
EI+ H+ H S ++ ++ + +YY PK+ K + A C C A
Sbjct: 718 EILTVEHNRAHRSAQENVKQVLSEYYFPKMTKLASEIAANCKTCAKA 764
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 491 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 548
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 549 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 596
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + +IEI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 712 ITDKNEQIEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 766
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 767 KYDRHPKKQELGETPI 782
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 486 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 543
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 544 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 591
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + +IEI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 707 ITDKNEQIEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 761
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 762 KYDRHPKKQELGETPI 777
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 521 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 578
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 579 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 626
Score = 38.7 bits (86), Expect = 0.009
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + ++EI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 742 ITDKNEQVEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 796
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 797 KYDRHPKKQELGETPI 812
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 521 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 578
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 579 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 626
Score = 38.7 bits (86), Expect = 0.009
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + ++EI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 742 ITDKNEQVEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 796
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 797 KYDRHPKKQELGETPI 812
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 486 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 543
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 544 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 591
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + +IEI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 707 ITDKNEQIEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 761
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 762 KYDRHPKKQELGETPI 777
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 486 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 543
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 544 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 591
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + +IEI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 707 ITDKNEQIEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 761
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 762 KYDRHPKKQELGETPI 777
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 60 SSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYG-KHFKIVTDCKAFQMT 236
S E P+ +S+ E Y + E E LAI+ + K +++LYG + I TD + +T
Sbjct: 939 SQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQ--PLT 996
Query: 237 LNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVAL 380
D + ++ RW ++ ++ + ++ G + DALSR AL
Sbjct: 997 FAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNLNAL 1044
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +3
Query: 531 VVPQKMEIEIIKRAHDNGHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPCLLASRKEG 710
+ + +IEI+ H+ H + ++ ++ + +DYY PK+ ++ +A C C +
Sbjct: 1160 ITDKNEQIEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVANCRVC-----TQA 1214
Query: 711 KREGFLNPIEKGDTPL 758
K + E G+TP+
Sbjct: 1215 KYDRHPKKQELGETPI 1230
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 15 ASSIAYAAILLQKDDSSELHPVHYMSKRTTDAESKYTSYELEALAIIECIKKFRHYLYGK 194
AS+ A A+L S E P+ ++S+ + AE Y + E E LAII +KK + YLYGK
Sbjct: 358 ASNFAVGAVL-----SQENRPISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGK 412
Query: 195 -HFKIVTD 215
KI TD
Sbjct: 413 AKVKIFTD 420
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 540 QKMEIEIIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIPC 686
+K + I+ HD+ GH KT+ + + YY + K I++Y+ C C
Sbjct: 41 EKEKEAILSTLHDDPIQGGHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKC 93
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 519 QHCLVVPQKMEIE-IIKRAHDN----GHFSKKKTMELINKDYYIPKLEKKIEDYIATCIP 683
Q ++ + EI+ I+ HD+ GH +T+ I + YY + + I++YI C
Sbjct: 15 QPVTIIKTEKEIQSILSTYHDDPIQGGHTGITRTLAKIKRHYYWKNMTRHIKEYIRRCHK 74
Query: 684 CLLA 695
C ++
Sbjct: 75 CQMS 78
>AY089438-1|AAL90176.1| 406|Drosophila melanogaster AT25567p
protein.
Length = 406
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 108 AESKYTSYELEALAIIECIKKFRHYLYGKHFKIVTDCKAFQM 233
AESK SYELE + C++ H L K ++ + A QM
Sbjct: 331 AESKLRSYELEVQHLQNCLENATHELKAKDDQLASLGGALQM 372
>AE014297-3563|AAF56309.1| 406|Drosophila melanogaster CG6607-PA
protein.
Length = 406
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 108 AESKYTSYELEALAIIECIKKFRHYLYGKHFKIVTDCKAFQM 233
AESK SYELE + C++ H L K ++ + A QM
Sbjct: 331 AESKLRSYELEVQHLQNCLENATHELKAKDDQLASLGGALQM 372
>AY047575-1|AAK77307.1| 428|Drosophila melanogaster GH08670p
protein.
Length = 428
Score = 29.1 bits (62), Expect = 6.9
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = -1
Query: 73 CSSLLSSFCNNIAAYAILEANR 8
C ++L+++C+N+A Y +L+A R
Sbjct: 228 CHTVLTTYCSNVAFYLLLKARR 249
>AE014298-722|AAG22407.2| 428|Drosophila melanogaster CG4202-PA
protein.
Length = 428
Score = 29.1 bits (62), Expect = 6.9
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = -1
Query: 73 CSSLLSSFCNNIAAYAILEANR 8
C ++L+++C+N+A Y +L+A R
Sbjct: 228 CHTVLTTYCSNVAFYLLLKARR 249
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,508,122
Number of Sequences: 53049
Number of extensions: 677314
Number of successful extensions: 1339
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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