Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_I10
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40953-2|AAB52647.1| 483|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical pr... 36 0.031
AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical ... 33 0.29
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.7
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 6.2
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 6.2
U23526-5|AAB36850.1| 391|Caenorhabditis elegans Acyltransferase... 28 6.2
L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore co... 28 6.2
Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U40953-2|AAB52647.1| 483|Caenorhabditis elegans Hypothetical
protein F53B1.2 protein.
Length = 483
Score = 89.0 bits (211), Expect = 3e-18
Identities = 69/240 (28%), Positives = 98/240 (40%), Gaps = 29/240 (12%)
Frame = +1
Query: 118 SDILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFVDRDFHTHPFDQLKLGERK 297
+D W ++V L K ++ I H +DG CLL+ D D P LG+ K
Sbjct: 9 ADPNEWRCEDVGNWLKKIGMAKYADLIAMKHKVDGKCLLALTDTDLKDPPVSINCLGDIK 68
Query: 298 RFILLVKKLQR----------HNRSAMMELGLC-----DDLI---NPATNINFLG----- 408
+ + ++ L + H+RS G D L+ N +++ G
Sbjct: 69 KILFAIEFLSQKVVEIGNSGVHHRSTPNGNGPSLKNSKDGLLVEYNEQNHLSISGEDVYT 128
Query: 409 -TNLSHLSYDLHNKIPNELSFAGNTECVSSYPPADIKASKLRPEVW-----KTAIALGYX 570
T + + D + + T V +I RP+ + K IA Y
Sbjct: 129 TTRRAEIVEDEETLLDTLAKSSDGTSTVQLISREEIIRQVERPDTYFKSVAKLLIAFAYS 188
Query: 571 XXXXXXXXXXXXXXHDKVPDMKKYPPLPDLFLDNVPHIPWAFDMCEITGSLLMAIWLIXL 750
HD+VPD K YPPLPD+ LDNVPHIPWAFDMCE G +L +W L
Sbjct: 189 SLSFLMTSFVMVLVHDRVPDTKTYPPLPDIVLDNVPHIPWAFDMCETIGLVLAVVWFTVL 248
>Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical
protein H21P03.3b protein.
Length = 490
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 643 PPLPDLFLDNVPHIPWAFDMCE--ITGSLLMAIWLI 744
PPLPD+ + +P IPW +CE + GS + + LI
Sbjct: 214 PPLPDIVFELIPKIPWGLRLCENLMIGSFVSLLVLI 249
>Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical
protein H21P03.3a protein.
Length = 450
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 643 PPLPDLFLDNVPHIPWAFDMCE--ITGSLLMAIWLI 744
PPLPD+ + +P IPW +CE + GS + + LI
Sbjct: 174 PPLPDIVFELIPKIPWGLRLCENLMIGSFVSLLVLI 209
>AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical
protein W07E6.3 protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 511 IKASKLRPEVWKTAIALGYXXXXXXXXXXXXXXXHDKVPDMKKYPPLPDLFLDNVPHI 684
I +L W T +A H++VPD Y PLPDLF + P +
Sbjct: 68 IDGKQLEVRKWPTLLATAMVGVGWLSNEVALAWVHERVPD--DYHPLPDLFFSHFPEV 123
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +1
Query: 70 IFVPPIKLEEYSETMESDILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFV-D 246
+ +PP K +Y+ D++NW LL N+ S I I + DG L V D
Sbjct: 630 LILPPNKTSDYTRWNAQDLINW-----VRLLITNNVDS-TIAIMVREEFDGETLACLVLD 683
Query: 247 RDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGL 363
DF + G K+ + ++ H R+ + L
Sbjct: 684 DDFRKEV--PIPYGHYKKMKIYGTEVLNHYRTEKYQADL 720
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 373 LINPATNINFLGTNLSHLSYDLHNKI 450
+I A N++ + T LSH YDL N+I
Sbjct: 184 VIEDAANVDHMLTLLSHCDYDLQNEI 209
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 373 LINPATNINFLGTNLSHLSYDLHNKI 450
+I A N++ + T LSH YDL N+I
Sbjct: 184 VIEDAANVDHMLTLLSHCDYDLQNEI 209
>U23526-5|AAB36850.1| 391|Caenorhabditis elegans
Acyltransferase-like protein 12 protein.
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = -1
Query: 280 SIDRKDAYGNRDQQTIAGTVRLYRAFYIFLLNSWKYSLYVIILPLLCYPNLEYRTPSFH 104
+ID + N I + L A Y F + +W + +I L +P + + TP F+
Sbjct: 20 NIDMSERTDNVHLIEIRRIISLVGAAYFFFMTAWVVPVACVITVSLLFPLMLFSTPLFN 78
>L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore complex
protein protein15 protein.
Length = 1127
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 118 SDILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLL-SFVDRDFHTHPFDQLKL-GE 291
S++L++ + E+ H++ I + +++IC +D+D + ++ + P D+ + G
Sbjct: 898 SEVLDFYKRRYPEMKHRKRIPTEILKICFGNDLDAMMSVEDMLEWNMAVQPNDEASVEGF 957
Query: 292 RKRFILLVKKLQRH 333
+ F LL L H
Sbjct: 958 ARAFHLLADLLAVH 971
>Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical
protein R05A10.5 protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 567 CLPSDLGNCSCDG 605
CL S+LGNC+C G
Sbjct: 61 CLSSELGNCACSG 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,371,245
Number of Sequences: 27780
Number of extensions: 364812
Number of successful extensions: 1014
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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