Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I06
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.70 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.6  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
 Frame = +2

Query: 134 LNIYFLFIHIYKTS*TKMDVDGASVP---GEID-------QNLLLQFSCMNTT------D 265
           L++    + +Y T  TK+D DG S+    G +D       Q L +  +C+N        D
Sbjct: 44  LSLGSFIVSVYLT--TKIDNDGESISLASGWLDLYLGITIQTLGIISNCINAKQITIFFD 101

Query: 266 REELIKQMQKLLGPSLNYNTASFFLDMS 349
           + + I +   LLG S+NY   S F++++
Sbjct: 102 KIQRIDKQFGLLGYSINYRRISIFVNLA 129


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 748 FDKCHSHLRFNCDFNPKCITYLF 680
           FD  + H +   D    C+TY+F
Sbjct: 182 FDMFYQHHKIVLDMGKNCVTYVF 204


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 572 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTD 673
           L  L +GH++ +TL++   S  G   +  HL  D
Sbjct: 420 LASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLD 453


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 465 RAPGSKLPVGPSD 427
           RAPG+K  VGP D
Sbjct: 26  RAPGAKKKVGPID 38


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 465 RAPGSKLPVGPSD 427
           RAPG+K  VGP D
Sbjct: 26  RAPGAKKKVGPID 38


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 449 LEPGARFDQNWSIVNTGTEQW 511
           + PG  F  ++++ N+GT  W
Sbjct: 157 IHPGMTFRYHFNVHNSGTHFW 177


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = -3

Query: 751 LFDKCHSHLRFNCDFNPKCITYL-FAFI 671
           LF +     +F CD  PK   YL F F+
Sbjct: 75  LFSRSDFFQQFECDNEPKLRHYLIFIFV 102


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 117 YFTTFRYNDISFVYVCTSADFCYSV 43
           +F  F     SF+ VC S D  Y+V
Sbjct: 131 FFRMFGLYLSSFILVCISVDRFYAV 155


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 117 YFTTFRYNDISFVYVCTSADFCYSV 43
           +F  F     SF+ VC S D  Y+V
Sbjct: 131 FFRMFGLYLSSFILVCISVDRFYAV 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,565
Number of Sequences: 336
Number of extensions: 3907
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)