Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I05
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           27   0.21 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.49 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.0  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   8.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.0  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
 Frame = +1

Query: 370 NTPTAFSSSGYS-TPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPS 546
           +T  A    G+  TP P     D TT+ +P P I   P P    SP+  +P   T    S
Sbjct: 57  STSAAADVDGWQVTPLPS----DGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTTSATS 112

Query: 547 SPTPFNPIRNEPINKPQPARIQ-PLSNRPQRPIFRPETKPF 666
                +P    PI     A I   L +   RP+  PE   F
Sbjct: 113 GAVMASP--PMPITTDNVAAISGVLRSLLDRPLPAPERPSF 151


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 568 IRNEPINKPQPARIQPLSNRPQRP 639
           + N P  KP+P ++     RP RP
Sbjct: 247 LENPPTPKPRPTKVSRRKPRPPRP 270


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 121 QNDSPIPP--RLQIPGAIPVGGPVRQGGFRQGRIAPVPGSI 237
           QN++P+P   R+ +P  +  G P   GG +     P PGS+
Sbjct: 108 QNNNPLPSPRRVAVPVLVRDGKPCLSGGPKH----PDPGSL 144


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +1

Query: 304 NLQSLDEPAKPVTEEPEDEYEINTPTAFSSSG-YSTPEPQNDFYDITTTSQPKPPIIFNP 480
           N  S+ EP    T  PE     +TP+A  S    +TP+P     + +T++  +   +   
Sbjct: 395 NSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVST- 453

Query: 481 FPQSSPSPVKLDP 519
             ++ P+P   +P
Sbjct: 454 -TEAPPAPAVSNP 465


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 93  YAVCFNSLCTK*LSYSTETTNTRSHSC 173
           Y  C+N   T+ L       N R+HSC
Sbjct: 115 YWTCWNGTATEQLCIGGLLYNERTHSC 141


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +1

Query: 331 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP 462
           +P  +EP D+YE +    +  S  +   P   F D+   +   P
Sbjct: 89  RPPPDEPIDDYEPSFDLFYYPSRQTLYTPVQYFKDLVAEAYVSP 132


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 484 PQSSPSPVKLDPIRPTQYRPSSPTPF 561
           P+  P P K DP R +     + TP+
Sbjct: 400 PEYYPDPEKYDPERFSDENKKNLTPY 425


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +1

Query: 475 NPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIR 573
           N  P  SP P  + P+     R   PT   P R
Sbjct: 215 NYSPSQSPEPESVRPLSLVVRRCEEPTEEKPWR 247


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 478 PFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRNEPIN 588
           P   +SP+P + +   PT     +P+    I  +P+N
Sbjct: 39  PNSAASPAPPEEEAASPTPGDVPTPSSPRSISEDPLN 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,938
Number of Sequences: 336
Number of extensions: 4396
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)