Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_I04
(757 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 33 0.32
12_01_0871 + 8300504-8300845 32 0.57
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 31 0.75
10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878 31 0.99
09_02_0082 - 4060018-4061604 31 0.99
07_01_0221 - 1635381-1637477 30 1.7
03_05_0514 - 25082662-25082669,25082978-25083043,25083903-250840... 30 2.3
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 3.0
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 29 3.0
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 3.0
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 29 3.0
10_06_0113 - 10903419-10903439,10904452-10904726,10905082-109052... 29 4.0
08_01_0899 - 8862275-8862972,8863252-8863332,8863594-8863819 29 4.0
12_02_1137 - 26392399-26392613,26392828-26393233 29 5.3
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 5.3
02_05_1180 + 34776151-34776480,34776578-34776760,34776849-347771... 29 5.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.3
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 7.0
06_03_1134 + 27892208-27892302,27892489-27892585,27893031-278930... 28 7.0
04_04_0493 - 25615507-25615524,25615564-25615816,25616127-256162... 28 7.0
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 28 7.0
12_01_0874 + 8384332-8384657,8385447-8386044 28 9.2
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 28 9.2
08_01_0621 - 5426210-5427787 28 9.2
05_02_0147 + 7082180-7082223,7082459-7082872,7083061-7083151,708... 28 9.2
02_01_0703 + 5251901-5251950,5252783-5253554 28 9.2
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 331 AAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVA 456
AAQ+ + L GNPPA ++A+G FS P+ + +VA
Sbjct: 25 AAQKASTWKTLSGNPPA--IIAKGGFSGLFPDSSDFAYGFVA 64
>12_01_0871 + 8300504-8300845
Length = 113
Score = 31.9 bits (69), Expect = 0.57
Identities = 24/65 (36%), Positives = 28/65 (43%)
Frame = -3
Query: 557 GMFLAM*ARARAICSGTGGEVGIALPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTA 378
G LA+ IC+G GGE G A W P+SSA + G V P G
Sbjct: 8 GCGLALHGPVSLICTGVGGERGEAATGVWEPWSSA--VRERGRALRAVSRLRP--LVGDQ 63
Query: 377 GGFPP 363
GG PP
Sbjct: 64 GGAPP 68
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Frame = +2
Query: 344 REFPVTLVETPLLFPSLHRAHSPGHLLKVFP-SASITSPTRMDTSPLVMLS-------PL 499
R P PLL PS R H G + P + + + R D PL+ L P
Sbjct: 6 RASPFLSPPPPLLHPSRRRRHRQGGCIHTSPGTRPLVARARFDPPPLLRLKVSDSSDCPA 65
Query: 500 PHQCLSRSLVLLPT 541
PH S+ LLPT
Sbjct: 66 PHHPHSQHQPLLPT 79
>10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878
Length = 947
Score = 31.1 bits (67), Expect = 0.99
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 157 FVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAA 336
++ + P P LP + + + YGA +++ G + + F+E++ AA
Sbjct: 634 YLDGSAPLPELPPTYVTFNMLATMDTHQNVYGAWSIRKGTKKYKN---VKFFESHRVFAA 690
Query: 337 QEQG--VPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTS 501
+ G GG AV V G+ WT G +E + PT ++ P+S
Sbjct: 691 RNVGGNYGHAAGGGDDAVDVTGVGADGWTQGGGGGGGAAARPEEPAWSPTPSSSPSS 747
>09_02_0082 - 4060018-4061604
Length = 528
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 353 PVTLVETPLLFPSLHRAHSPGHLLKVFPSASITSPT-RMDTSPLVMLSPLPHQCLSRSLV 529
PV V PL L + + H + AS +S T R +PL + +P PH C+ R V
Sbjct: 115 PVPSVPVPL---GLTMSPTTAHYSFSYGGASSSSATPRAPIAPLALRAPAPHLCVPR--V 169
Query: 530 LLPTSP 547
L P +P
Sbjct: 170 LSPPAP 175
>07_01_0221 - 1635381-1637477
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 270 EFDSLSAVTLRYLGYY--SDGGNRGDRDRQKRSRSGHGNERPVCAVPVWV 127
+ +SL+++ GYY +DGGN GD + + HG A+ VWV
Sbjct: 181 DINSLTSINSTSAGYYDDNDGGNSGDHGFHNLTLASHGE-----AMQVWV 225
>03_05_0514 -
25082662-25082669,25082978-25083043,25083903-25084017,
25084769-25084843,25085285-25085338,25085420-25085471,
25087308-25087447,25087993-25088077,25088358-25088431,
25088533-25088616,25088617-25088653,25089569-25089872,
25090371-25090536,25091053-25091076
Length = 427
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 555 NVLGDVGKSTSDLLRHWWGSGDSITSGLVSI 463
NV+ + G ST L WWGS ITSG++ I
Sbjct: 4 NVITEAGISTR--LNQWWGSIPFITSGVILI 32
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 437 SASITSPTRMDTSPLVMLSPLPHQCLSR-SLVLLPTSP 547
++S ++ T+PL + +P PH C+SR L+PT P
Sbjct: 410 ASSSSAMPHATTAPLALRAPAPHLCVSRMPPPLVPTPP 447
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 636 CFHLFLFIRCKP-NPKYVCEIYRLLLERNVLGDVGKSTSDLL 514
CF LF+F P +P+Y+C + R + R +L + + + L
Sbjct: 213 CFILFIFFPVTPESPRYLCSVGRTMDARVILEKIARMNNSSL 254
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 2/121 (1%)
Frame = +1
Query: 148 YRPFVSVTTPTPFLPIPISSV-APVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNN 324
Y P + +PT P S V +P V + + T N +P SY+ + +
Sbjct: 1655 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1714
Query: 325 GIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTS 501
+ P + P P ++S TSP P S +Y Y PT + PTS
Sbjct: 1715 PTSPSYSYSPTS----PSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1770
Query: 502 P 504
P
Sbjct: 1771 P 1771
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 403 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 504
S+S TSP P S +Y Y PT +A PTSP
Sbjct: 1751 SYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSP 1785
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 403 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 504
S+S TSP P S +Y + Y PT A PTSP
Sbjct: 1758 SYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSP 1792
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 386 PSLHRAHSPGHLLKVFPSASITSPTRMDTSPLVMLSPLPHQCLSRS-LVLLPTSP 547
P R HSP L + PS+S ++ TS + P P + + + V LP+ P
Sbjct: 30 PRSRRRHSPSPSLALTPSSSASASASASTSSRPKVRPSPRRAYAAAQWVALPSHP 84
>10_06_0113 -
10903419-10903439,10904452-10904726,10905082-10905247,
10905622-10905766,10905837-10905896,10905979-10906028
Length = 238
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -2
Query: 198 RDRQKRSRSGHGNERPVCAVPVWVLLVEFIFIPDLGGNRCHHASEYYCEFHFCYSSKTSY 19
R+ ++ + H +R W+ ++FI I R H + C FH+ + +Y
Sbjct: 3 REAKEVNGGFHRKQRTYLRWEQWIKKLQFITIGSRQNPRYHFSIFVQCGFHWDHRKSLNY 62
Query: 18 VG 13
VG
Sbjct: 63 VG 64
>08_01_0899 - 8862275-8862972,8863252-8863332,8863594-8863819
Length = 334
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Frame = +1
Query: 271 GNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNY 450
GN+ P+ Y NN + QGVP N G P P + +F + G
Sbjct: 51 GND-RPETREEAMYMGNNNNGYRPQGVPANESGRIPGQPDSSIENFKAITTRGGHTQKQE 109
Query: 451 VADENGYQPTGNAI--PTSPPVPEQIARA 531
A NG + P +P P + R+
Sbjct: 110 TAPNNGGGQADGTLQQPDTPQAPGEEERS 138
>12_02_1137 - 26392399-26392613,26392828-26393233
Length = 206
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 533 RARAICSGTGGEVGIALPVGWYPFSSAT*LTLMG--TPSGDVQENEPCA 393
R R C G VG+ + G P ++AT + L G G +E+ CA
Sbjct: 140 RRRRSCVGEAAPVGVGILTGGKPTTAATAVALTGEVLRGGGARESSSCA 188
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 106 ENEFYKKNPYR--YSTYRPFVSVTTPTPFLPIPISSVAPVRVVPKVS 240
E + Y +PY Y + + S P+P P+SS AP PK S
Sbjct: 15 EYDDYNPHPYGGGYDIFATYGSPIPPSPTTCYPVSSAAPTAPPPKPS 61
>02_05_1180 +
34776151-34776480,34776578-34776760,34776849-34777198,
34777430-34777631
Length = 354
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 392 LHRAHSPGHLLKVFPSASITSPTRMDTSPLV 484
LHRAH L ++FP +TS + D +P+V
Sbjct: 267 LHRAHLLQMLKELFPQYPVTSKCKDDGNPMV 297
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 364 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 507
GG+ A P G+ ++ S VP +Y Y P+ A P +PP
Sbjct: 315 GGDYAAPPSSYGGNNAYNSDSAVPPPSSYGGGPGSYPPSYGAPPPNPP 362
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 403 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 504
S+S TSP P S +Y Y PT A PTSP
Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1723
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 403 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 504
S+S TSP P S Y GY PT + PTSP
Sbjct: 1703 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1737
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 352 PRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 504
P G+P P S+S TSP P S +Y Y PT + PTSP
Sbjct: 1583 PSYTPGSPTYSPT--SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
>06_03_1134 +
27892208-27892302,27892489-27892585,27893031-27893092,
27893198-27893409,27893487-27893566,27894208-27894328,
27894644-27894731,27894815-27894931,27895031-27895140,
27895334-27895482
Length = 376
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 210 NRGDRDRQKRSRSGHGNERPVC 145
N GDR+++K++R G+ P C
Sbjct: 157 NNGDRNKEKKTRRREGDRNPFC 178
>04_04_0493 -
25615507-25615524,25615564-25615816,25616127-25616242,
25616410-25616662,25616736-25616823,25616920-25616994,
25617065-25617140,25617528-25617791
Length = 380
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = -3
Query: 506 GGEVGIALPVGWY-PFSSAT 450
GG++GIAL + WY PF + T
Sbjct: 256 GGQIGIALSITWYEPFRNTT 275
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 654 Y*QRQYCFHLFLFIRCKPNPKYVCEIYRLLLERNVLGDVGKSTSDLLRHWWG 499
Y Q H FL RC+ P Y E+ ++++ +G + +LRH G
Sbjct: 66 YCQEPVVTHDFLNTRCRRRPNY-GEVEEMIMKAAKMGQMSSQIGVVLRHQHG 116
>12_01_0874 + 8384332-8384657,8385447-8386044
Length = 307
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 225 YSDGGNRGDRDRQKRSRSGHGNER 154
++DG GDR RQ+R R G +R
Sbjct: 107 HNDGSVDGDRQRQRRLRDDEGRQR 130
>09_06_0061 +
20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 310 YETNNGIAAQEQGVPRN--LGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTG 483
Y N +A+ E + L GNPP + V + + + +P + S N E T
Sbjct: 185 YRVRNVLASVESSLSNASFLSGNPPEIVVWSASLYDYKNPRELSTSHNQFLKEKLPMNTP 244
Query: 484 NAIPTSPPVPEQI 522
A P+ P + +I
Sbjct: 245 LAAPSLPALNIEI 257
>08_01_0621 - 5426210-5427787
Length = 525
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 154 PFVSVTTPTPFLPIPISSVAP 216
PF TP P LPIP+S P
Sbjct: 188 PFTGERTPLPDLPIPLSETEP 208
>05_02_0147 +
7082180-7082223,7082459-7082872,7083061-7083151,
7084230-7084487
Length = 268
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 419 LLKVFPSASITSPTRMDTSPLVMLSPLPH--QCLSRSLVLLPTSPRTFLS 562
L++ S PT +TS L ++S LP + LSR++ + PR++LS
Sbjct: 124 LIRSLGCPSTPKPTYFETSSLQLISLLPFCSKFLSRNVGIAEVIPRSWLS 173
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 451 VADENGYQPTGNAIPTSPPVP 513
+A G P GNA+P PP P
Sbjct: 51 IAPPPGRMPMGNAVPDGPPTP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,238,978
Number of Sequences: 37544
Number of extensions: 515580
Number of successful extensions: 1797
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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