Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I02
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.52 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.4  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 340 WTIYEMEELGDSWNIYMVDDRRFL 411
           WTIYEM  L   W+    +  RFL
Sbjct: 246 WTIYEMYHLAILWSCTSTNCPRFL 269


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 668 SFSLYCVGFVWFVL-SLVKRYYMRQF 742
           SF +   GF+W VL S V+ Y  R F
Sbjct: 488 SFLVNDFGFIWLVLSSTVRAYASRAF 513


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 197 QKIEAAVESDHVDSEEEKVLEEKYVDELAKSLPQGTDK 310
           QKI  AVE D  D+ E+    +  V E+   + + T K
Sbjct: 470 QKIAGAVEEDDEDAIEKPAPVKISVQEVLNRVRKPTKK 507


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 288 PYRKALTKLQKSLTLRFLDYLRDGGTG*FVEYLH 389
           P+ K       S  +  LD+ ++ GT  F+ ++H
Sbjct: 203 PHAKLYDYDLSSHVITILDWTKEDGTDKFMSHIH 236


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 372 ITQFLHLVDSPESAESRISGVLSVP 298
           I +++ L+D  E A + ++G+L+ P
Sbjct: 81  IVKYIILIDLGEVAVTVLAGILTTP 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,299
Number of Sequences: 336
Number of extensions: 3714
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)