Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_I02
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   3.5  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   3.5  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   3.5  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   3.5  
AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding pr...    24   6.1  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.1  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 182 DGDGNQKIEAAVESDHVDSEEEKVLEEKYVD 274
           D D +  +   +ES+  DS +E ++EE+  D
Sbjct: 331 DSDFDDDVGDRLESEEEDSTDETLIEEELTD 361


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 182 DGDGNQKIEAAVESDHVDSEEEKVLEEKYVD 274
           D D +  +   +ES+  DS +E ++EE+  D
Sbjct: 101 DSDFDDDVGDRLESEEEDSTDETLIEEELTD 131


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 182 DGDGNQKIEAAVESDHVDSEEEKVLEEKYVD 274
           D D +  +   +ES+  DS +E ++EE+  D
Sbjct: 107 DSDFDDDVGDRLESEEEDSTDETLIEEELTD 137


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 182 DGDGNQKIEAAVESDHVDSEEEKVLEEKYVD 274
           D D +  +   +ES+  DS +E ++EE+  D
Sbjct: 101 DSDFDDDVGDRLESEEEDSTDETLIEEELTD 131


>AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding
           protein AgamOBP25 protein.
          Length = 149

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 675 ACTASASFGSCCLWSNATTCGSSXCSL 755
           AC  +     C   + A  CGSS C++
Sbjct: 123 ACETAYKVTECYFQNKAGLCGSSKCNI 149


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 530 WFRSLSWYFLLTSNYFFYGENLIDYFGVVINRTDYLKFLVTYHRF 664
           W   LS + +L   Y  +  +  D++ + IN   YLK   T H F
Sbjct: 539 WLYLLS-HEMLNPQYGLFQYSRDDHYSLQINPDSYLKQRKTIHFF 582


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,698
Number of Sequences: 2352
Number of extensions: 15210
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)